Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is yicG [C]

Identifier: 77456744

GI number: 77456744

Start: 597950

End: 598561

Strand: Direct

Name: yicG [C]

Synonym: Pfl01_0516

Alternate gene names: 77456744

Gene position: 597950-598561 (Clockwise)

Preceding gene: 77456743

Following gene: 77456746

Centisome position: 9.29

GC content: 61.27

Gene sequence:

>612_bases
ATGTTGCTGATGCTCTACCTCGTCGCCATTACTGCCGAAGCCATGACCGGCGCCATGTCTGCCGGCCGTCGCGGCATGGA
CTGGTTCGGCGTGGTGCTGATCGCCTGCGTCACGGCATTGGGCGGTGGTTCGGTGCGCGACGTGCTGCTCGGGCATTACC
CGCTGACCTGGGTCAAACACCCGGAATATCTGGTACTGACCACAGTCGCGGCGATGATCACCGTGTTCACGGCTCGCTGG
ATGCGCCATCTGCGCTCGCTGTTTCTGGTGCTCGACGCGGTCGGTCTGGTGGCGTTCACCCTGATCGGCTGCATGACCGC
CCTGGAAATGGGCCACGGCATGTTGGTGGCTTCGGTCAGCGGCGTGATCACGGGTGTGTTCGGCGGCATTCTGCGCGACA
TCTTCTGCAACGACATCCCGTTGATCTTCCGCCGTGAGCTGTACGCCAGCGTCTCGTTCGCTGCGGCGTGGTGCTACATG
CTCTGTCTGTTCCTGAGTGTGCCGAGCGAACAGGCGATCCTGATCACGTTGTTCGGTGGCTTTCTACTGCGGCTGTTGGC
GATTCGCTTCCACTGGGAAATGCCGAAGTTCGTCTATAACGACGCACCTTGA

Upstream 100 bases:

>100_bases
ATTTCATCAAGTTCTGAGATCGGCACCCTCGCCGGGGCGCCCTCTTTTGGTGCCTCGGCGAAGTGAGTAGACTGCGCGCC
TTCCTGCCAGGATCGCCACC

Downstream 100 bases:

>100_bases
CGGTCGGCGTGTTGTTTCAGCGCCCATTCCACATGTTCACGCACCAGTTCTGACGGGTATTCGCGCCGGGCCTTGAGCGC
TTCCAGCACTGGAATGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLLMLYLVAITAEAMTGAMSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKHPEYLVLTTVAAMITVFTARW
MRHLRSLFLVLDAVGLVAFTLIGCMTALEMGHGMLVASVSGVITGVFGGILRDIFCNDIPLIFRRELYASVSFAAAWCYM
LCLFLSVPSEQAILITLFGGFLLRLLAIRFHWEMPKFVYNDAP

Sequences:

>Translated_203_residues
MLLMLYLVAITAEAMTGAMSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKHPEYLVLTTVAAMITVFTARW
MRHLRSLFLVLDAVGLVAFTLIGCMTALEMGHGMLVASVSGVITGVFGGILRDIFCNDIPLIFRRELYASVSFAAAWCYM
LCLFLSVPSEQAILITLFGGFLLRLLAIRFHWEMPKFVYNDAP
>Mature_203_residues
MLLMLYLVAITAEAMTGAMSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKHPEYLVLTTVAAMITVFTARW
MRHLRSLFLVLDAVGLVAFTLIGCMTALEMGHGMLVASVSGVITGVFGGILRDIFCNDIPLIFRRELYASVSFAAAWCYM
LCLFLSVPSEQAILITLFGGFLLRLLAIRFHWEMPKFVYNDAP

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=200, Percent_Identity=57, Blast_Score=217, Evalue=5e-58,
Organism=Escherichia coli, GI1786352, Length=199, Percent_Identity=40.7035175879397, Blast_Score=117, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22361; Mature: 22361

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLMLYLVAITAEAMTGAMSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKH
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEECC
PEYLVLTTVAAMITVFTARWMRHLRSLFLVLDAVGLVAFTLIGCMTALEMGHGMLVASVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GVITGVFGGILRDIFCNDIPLIFRRELYASVSFAAAWCYMLCLFLSVPSEQAILITLFGG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FLLRLLAIRFHWEMPKFVYNDAP
HHHHHHHHHHHCCCCHHHCCCCC
>Mature Secondary Structure
MLLMLYLVAITAEAMTGAMSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKH
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEECC
PEYLVLTTVAAMITVFTARWMRHLRSLFLVLDAVGLVAFTLIGCMTALEMGHGMLVASVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GVITGVFGGILRDIFCNDIPLIFRRELYASVSFAAAWCYMLCLFLSVPSEQAILITLFGG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FLLRLLAIRFHWEMPKFVYNDAP
HHHHHHHHHHHCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]