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The map label for this gene is ynfM [H]

Identifier: 77456644

GI number: 77456644

Start: 477548

End: 478822

Strand: Reverse

Name: ynfM [H]

Synonym: Pfl01_0416

Alternate gene names: 77456644

Gene position: 478822-477548 (Counterclockwise)

Preceding gene: 77456646

Following gene: 77456632

Centisome position: 7.44

GC content: 63.76

Gene sequence:

>1275_bases
GTGAAAACCGCCGTCGCTCCACTGGCCCATGAAGTCCCGCCCGCTGCGGCGGACGATGTGATGACCGAACTGCAAGAGAT
CTACATCGAGAAAGGCACGCCCGCGTTCATGCGCACGGTGCTCGCGCTGTTCAGCGGAGGCTTCGCCACCTTCGCCCTGC
TGTACTGCGTGCAGCCGATGATGCCGCTGCTGTCCCACGAGTATTCGATCAACGCTGCGCAGAGCAGCCTGATCCTGTCG
GTGGCCACCGGCATGCTGGCGTTCGGTCTGCTGATCACCGGCCCGATTTCCGATCGGGTCGGGCGCAAACCGGTGATGGT
CGCCGCGCTGTTTGCTGCTGCGCTATGCACCATCGCCAGTTCGATGATGCCGAGCTGGCACGGCGTGCTGATCATGCGCG
CGCTGATCGGGCTGTCATTGAGTGGCCTGGCGGCGGTGGCGATGACGTACCTGAGCGAGGAAATCCATCCGCAGCACATC
GGGCTGGCGATGGGTTTGTACATCGGCGGCAACGCGATTGGCGGCATGAGCGGGCGGTTGATCACCGGTGTGCTGATCGA
CTTCGTCAGCTGGCACACCGCGATGATGGTGATCGGTGGGCTCGCGCTGATTGCGGCGGCGGTGTTCTGGAAAATCCTGC
CGGAATCGCGCAACTTCCGCTCCCGCTCGCTGCATCCGCGCAGCCTGCTCGACGGCTTCACCATGCACTTTCGCGATGCC
GGCCTGCCGTTGCTGTTCCTTGAGGCGTTCGTGCTGATGGGCGCCTTCGTCACCCTGTTCAACTACATCGGTTACCGCCT
GCTGGCCGAGCCGTATCACATGGATCAAGTGTTCGTGGGACTGCTGTCGGTGGTGTACCTGTCGGGCATCTACAGCTCGG
CGAAAATCGGTTCGCTGGCCGACAAACTGGGACGCCGCAAAGTGCTGTGGGCCACCATCGCCCTGATGTTCGCCGGCCTC
GCCCTGACCATGTTCACACCGCTGCCGCTGGTGATCATTGGCATGCTGATCTTCACCTTTGGCTTCTTCGGCGCCCACTC
GGTGGCCAGCAGCTGGATCGGCCGCCGGGCGCTCAAGGCCAAGGGCCAGGCGTCGTCGTTGTACCTGTTCAGCTATTACG
CCGGGTCGAGCATCGCCGGGACAGCGGGCGGGGTGTTCTGGCACATGGCCGGGTGGAACGGGATTGGCCTGTTCATCGGC
GCGCTGTTGCTGGTGGCGCTGTTGGTGGCGTTGAAGCTGGCGAAGCTGCCGCCGCTCGGTGGCGTCAAAGCCTGA

Upstream 100 bases:

>100_bases
TAAAAGCTATCAAACAGGTCGAACAATATATTGGATAGAAACATTAGCCAGCTATATGATTTTTTCATTGCCTGTCTGCC
CGCGCCCTCCGAGGTCTGAT

Downstream 100 bases:

>100_bases
TTCACGCCCACAAAAAACGCCCGGCATAATCCGGGCGTTTTTTCTACCATCAGAGCTGAGCGCCGATCACTCGTGATACT
GCGCCGACAACTCGTGCACC

Product: general substrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKTAVAPLAHEVPPAAADDVMTELQEIYIEKGTPAFMRTVLALFSGGFATFALLYCVQPMMPLLSHEYSINAAQSSLILS
VATGMLAFGLLITGPISDRVGRKPVMVAALFAAALCTIASSMMPSWHGVLIMRALIGLSLSGLAAVAMTYLSEEIHPQHI
GLAMGLYIGGNAIGGMSGRLITGVLIDFVSWHTAMMVIGGLALIAAAVFWKILPESRNFRSRSLHPRSLLDGFTMHFRDA
GLPLLFLEAFVLMGAFVTLFNYIGYRLLAEPYHMDQVFVGLLSVVYLSGIYSSAKIGSLADKLGRRKVLWATIALMFAGL
ALTMFTPLPLVIIGMLIFTFGFFGAHSVASSWIGRRALKAKGQASSLYLFSYYAGSSIAGTAGGVFWHMAGWNGIGLFIG
ALLLVALLVALKLAKLPPLGGVKA

Sequences:

>Translated_424_residues
MKTAVAPLAHEVPPAAADDVMTELQEIYIEKGTPAFMRTVLALFSGGFATFALLYCVQPMMPLLSHEYSINAAQSSLILS
VATGMLAFGLLITGPISDRVGRKPVMVAALFAAALCTIASSMMPSWHGVLIMRALIGLSLSGLAAVAMTYLSEEIHPQHI
GLAMGLYIGGNAIGGMSGRLITGVLIDFVSWHTAMMVIGGLALIAAAVFWKILPESRNFRSRSLHPRSLLDGFTMHFRDA
GLPLLFLEAFVLMGAFVTLFNYIGYRLLAEPYHMDQVFVGLLSVVYLSGIYSSAKIGSLADKLGRRKVLWATIALMFAGL
ALTMFTPLPLVIIGMLIFTFGFFGAHSVASSWIGRRALKAKGQASSLYLFSYYAGSSIAGTAGGVFWHMAGWNGIGLFIG
ALLLVALLVALKLAKLPPLGGVKA
>Mature_424_residues
MKTAVAPLAHEVPPAAADDVMTELQEIYIEKGTPAFMRTVLALFSGGFATFALLYCVQPMMPLLSHEYSINAAQSSLILS
VATGMLAFGLLITGPISDRVGRKPVMVAALFAAALCTIASSMMPSWHGVLIMRALIGLSLSGLAAVAMTYLSEEIHPQHI
GLAMGLYIGGNAIGGMSGRLITGVLIDFVSWHTAMMVIGGLALIAAAVFWKILPESRNFRSRSLHPRSLLDGFTMHFRDA
GLPLLFLEAFVLMGAFVTLFNYIGYRLLAEPYHMDQVFVGLLSVVYLSGIYSSAKIGSLADKLGRRKVLWATIALMFAGL
ALTMFTPLPLVIIGMLIFTFGFFGAHSVASSWIGRRALKAKGQASSLYLFSYYAGSSIAGTAGGVFWHMAGWNGIGLFIG
ALLLVALLVALKLAKLPPLGGVKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=403, Percent_Identity=60.7940446650124, Blast_Score=498, Evalue=1e-142,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45230; Mature: 45230

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAVAPLAHEVPPAAADDVMTELQEIYIEKGTPAFMRTVLALFSGGFATFALLYCVQPM
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
MPLLSHEYSINAAQSSLILSVATGMLAFGLLITGPISDRVGRKPVMVAALFAAALCTIAS
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHH
SMMPSWHGVLIMRALIGLSLSGLAAVAMTYLSEEIHPQHIGLAMGLYIGGNAIGGMSGRL
HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCHHH
ITGVLIDFVSWHTAMMVIGGLALIAAAVFWKILPESRNFRSRSLHPRSLLDGFTMHFRDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GLPLLFLEAFVLMGAFVTLFNYIGYRLLAEPYHMDQVFVGLLSVVYLSGIYSSAKIGSLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLGRRKVLWATIALMFAGLALTMFTPLPLVIIGMLIFTFGFFGAHSVASSWIGRRALKA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KGQASSLYLFSYYAGSSIAGTAGGVFWHMAGWNGIGLFIGALLLVALLVALKLAKLPPLG
CCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVKA
CCCC
>Mature Secondary Structure
MKTAVAPLAHEVPPAAADDVMTELQEIYIEKGTPAFMRTVLALFSGGFATFALLYCVQPM
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
MPLLSHEYSINAAQSSLILSVATGMLAFGLLITGPISDRVGRKPVMVAALFAAALCTIAS
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHH
SMMPSWHGVLIMRALIGLSLSGLAAVAMTYLSEEIHPQHIGLAMGLYIGGNAIGGMSGRL
HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCHHH
ITGVLIDFVSWHTAMMVIGGLALIAAAVFWKILPESRNFRSRSLHPRSLLDGFTMHFRDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
GLPLLFLEAFVLMGAFVTLFNYIGYRLLAEPYHMDQVFVGLLSVVYLSGIYSSAKIGSLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLGRRKVLWATIALMFAGLALTMFTPLPLVIIGMLIFTFGFFGAHSVASSWIGRRALKA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KGQASSLYLFSYYAGSSIAGTAGGVFWHMAGWNGIGLFIGALLLVALLVALKLAKLPPLG
CCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVKA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]