Click here to switch to the map view.

The map label for this gene is tatC [H]

Identifier: 77456608

GI number: 77456608

Start: 435834

End: 436628

Strand: Reverse

Name: tatC [H]

Synonym: Pfl01_0380

Alternate gene names: 77456608

Gene position: 436628-435834 (Counterclockwise)

Preceding gene: 77456609

Following gene: 77456607

Centisome position: 6.78

GC content: 60.88

Gene sequence:

>795_bases
ATGACAGGCCCTAGCCTCCCCGAAAACGACCAGCACATGCCGCTGGTTTCGCACCTCACCGAGTTGCGCACCCGCCTGCT
GCGTTGCGTGGCGGCGATCTTCATCATCTTTGCCGGGCTGTTTGCCTTCACCCAGCAGATCTACACCTTCGTCTCGACGC
CGCTGCGCGAATACCTGCCGGCCGGCGCGACGATGATCGCCACCGACGTGTCGTCGCCGTTCCTGACGCCGCTGAAACTG
ACGATGATGGTCTCACTGTTCCTGGCGATTCCGGTGATCCTGCATCAGATCTGGGGCTTCATCGCACCGGGTCTGTACAA
GCACGAGAAGCGTGTCGCAGTGCCGTTGCTGATCTCCAGCATCCTGCTGTTCTACACCGGCATGGCGTTCGCCTACTTCT
TCGTGTTCCCGCTGATCTTCAAGTTCTTCGCCTCGGCCACCCCGGCCGGCGTGGAAATGATGACCGACATCACCAGTTAC
CTCGATTTCGTCATGACGCTGTTCTTCGCCTTCGGCGTGGCGTTCGAAATCCCGGTGGCCGTGGTGCTGCTGGTGTGGAT
CGGCGTGGTCGACGTCAAATACCTGAAGAAGATCCGTCCGTACGTGATCATCGGCTGCTTCGTGGTCGGCATGATCCTGA
CCCCGCCGGACATCTTCTCCCAGACCCTGCTGGCCGTGCCGATGTGGATGCTGTTCGAAGTCGGCATCCTCTTCGGCAGT
CTGGTCAGCAAGCGCGAGCGCCCGGAAGAAACCGCCGACGATCACAACGACCAGCCGCCAGCGACTCAGCCATGA

Upstream 100 bases:

>100_bases
GCAGGGCTGCGTTACTCGTTGCTTATTTGAAACGCCAAACTACGCGCCTCGCGCCTTGCCCTGCGCAAATACGGGCTCGG
CGCGACACAGGAAATGACCG

Downstream 100 bases:

>100_bases
ACCTGCTGCTGCTCGAAGAGGCCGACTTCATTGCGGCCGACCGCGTCGTGCTGCGTGATCGGCGCCTGACCCACATGCAG
GAAGTCCACCGTTCGGAAGT

Product: Sec-independent periplasmic protein translocase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTGPSLPENDQHMPLVSHLTELRTRLLRCVAAIFIIFAGLFAFTQQIYTFVSTPLREYLPAGATMIATDVSSPFLTPLKL
TMMVSLFLAIPVILHQIWGFIAPGLYKHEKRVAVPLLISSILLFYTGMAFAYFFVFPLIFKFFASATPAGVEMMTDITSY
LDFVMTLFFAFGVAFEIPVAVVLLVWIGVVDVKYLKKIRPYVIIGCFVVGMILTPPDIFSQTLLAVPMWMLFEVGILFGS
LVSKRERPEETADDHNDQPPATQP

Sequences:

>Translated_264_residues
MTGPSLPENDQHMPLVSHLTELRTRLLRCVAAIFIIFAGLFAFTQQIYTFVSTPLREYLPAGATMIATDVSSPFLTPLKL
TMMVSLFLAIPVILHQIWGFIAPGLYKHEKRVAVPLLISSILLFYTGMAFAYFFVFPLIFKFFASATPAGVEMMTDITSY
LDFVMTLFFAFGVAFEIPVAVVLLVWIGVVDVKYLKKIRPYVIIGCFVVGMILTPPDIFSQTLLAVPMWMLFEVGILFGS
LVSKRERPEETADDHNDQPPATQP
>Mature_263_residues
TGPSLPENDQHMPLVSHLTELRTRLLRCVAAIFIIFAGLFAFTQQIYTFVSTPLREYLPAGATMIATDVSSPFLTPLKLT
MMVSLFLAIPVILHQIWGFIAPGLYKHEKRVAVPLLISSILLFYTGMAFAYFFVFPLIFKFFASATPAGVEMMTDITSYL
DFVMTLFFAFGVAFEIPVAVVLLVWIGVVDVKYLKKIRPYVIIGCFVVGMILTPPDIFSQTLLAVPMWMLFEVGILFGSL
VSKRERPEETADDHNDQPPATQP

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG0805

COG function: function code U; Sec-independent protein secretion pathway component TatC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatC family [H]

Homologues:

Organism=Escherichia coli, GI2367313, Length=254, Percent_Identity=58.2677165354331, Blast_Score=310, Evalue=4e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002033
- InterPro:   IPR019820
- InterPro:   IPR019822 [H]

Pfam domain/function: PF00902 TatC [H]

EC number: NA

Molecular weight: Translated: 29558; Mature: 29426

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS01218 TATC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TGPSLPENDQHMPLVSHLTELRTRLLRCVAAIFIIFAGLFAFTQQIYTFVSTPLREYLP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGATMIATDVSSPFLTPLKLTMMVSLFLAIPVILHQIWGFIAPGLYKHEKRVAVPLLISS
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ILLFYTGMAFAYFFVFPLIFKFFASATPAGVEMMTDITSYLDFVMTLFFAFGVAFEIPVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLLVWIGVVDVKYLKKIRPYVIIGCFVVGMILTPPDIFSQTLLAVPMWMLFEVGILFGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVSKRERPEETADDHNDQPPATQP
HHHHHCCCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA