| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456579
Identifier: 77456579
GI number: 77456579
Start: 400452
End: 401816
Strand: Direct
Name: 77456579
Synonym: Pfl01_0351
Alternate gene names: NA
Gene position: 400452-401816 (Clockwise)
Preceding gene: 77456578
Following gene: 77456580
Centisome position: 6.22
GC content: 64.91
Gene sequence:
>1365_bases TTGAGTCGCAAGCTTAATTTCGGGTGGCTGTTGCTGGGCGTGGCCATGACGGCCGGCGCCCAGGAAAAACCGGCGGACTT CGCCGCGCAGGTGCCGTTGTCGGTCAGTGGCGCAGGCCCGTGGTATCGCCTCGAACTGCCGCTGAACGTGCAGTTGCAGG CGCGTCAGACTGATCTCAGCGATCTGCGGGTGTTCAACGCCGCCGGAGAACCGCAGGCCTATGCGCTGGCCCGGGAATCG GCGCAGACCCGCGACGATGGCCAATTGCATGAGGTGAAGTGGTTCCCGCTGTACAACTCGGCGGATGCCACCGAACGTGC GCCGAGCGTTCGCGTGCAATCCACCACCACCGGCACGCTGGTGGAAGTGCAGCCGTCCAGTCAACTTGAAGCCGGTGAAG AAGTACTGCGCGGCTGGCTGCTCGACGCCAGTGCGATCAAGGCGCCGTTGCAGCAACTTTTCCTCGACTGGACCAGCGAG CGCGACGGCTTCCAGCGTTTCAGCATCGAGGCCAGCGACGACCTGCAGCACTGGCAAGCCTGGGGCGAAGGCCAGGTCGC GCGCCTGACCTTTGCCGACGAACGGGTCGAGCAGCATGAAGTCGCGCTGCCAGGGCAATCGGCGCGGTATCTGCGTCTGC TTTGGGATTCACCGGCCTCGGCGCCGGTCCTGACGTCAGCGCAACTGAAAAGCAGCGACCCGCGCAACTTGCCGCTGCCA TTGGTCTGGTCGCCAGCGTTGGCCGGCAGCAGCGGCAAGCCCGGCGAATACACCTGGCAGTTGCCGATGGGGCTGAACAT CGAGCGGGTGCAGGTCGAGCTGAAGCAAGCCAACAGCCTCGCGCCGGTGACACTTTCGGGGCGTCGCGAAAGCAGTCTGC CGTGGCAAGCGATTAGCAGCGGCTTGCTCTATCGCTTGACCCAGAATGGCCAGGACGTGGTGCAGAACGAATTGCAGCTG TACGGGCAGACCGTGCAGCAGTTGAAACTCACGGTCGACGAACGCGGCGGCGGTCTCGGCGAGCAGGCACCGAGCGTGAA ATACGCGGTGCGCGCCACTCAGGTGATCTTCCTCGCGCGCGGCGACGGGCCTTACAGCCTGGCGCTGGGCAGTCCGACGG TGAAGACGGCGAACCTGCCGCTGACCACGCTGATCCCCGATTTCAAACCGGAGAAACTGGCCACGCTGGGCAAGGCCACG GTGCAGGGTGAAGCGCTGGCGACTCAGACCTCGACGGCCACCACGGCTGCGACCACCGACACCCACTGGAAGAGGTTCGG CCTGTGGGCTGTGTTGCTGCTCAGTGTGCTGTTTCTGGCGGCGATGGCCTTCAGTCTGCTGCGCAAGCCGCCGGCCAAAT CCTGA
Upstream 100 bases:
>100_bases TGTTGCTGGTGGTGGGCTACTTTGCGCCGCTGCCGCCCAAACGCGTTGACGCTGCACCGGCGGCGGACAAACCGGCCCCG GAAACCGAAGGAGTGTCGTC
Downstream 100 bases:
>100_bases ATATGAAGGGTGTGGCCTCTACACCCGTCGGGTTTCCAACTACGCTGAATCCGGTGCCTGAACTCTCTGGGTTCGATCAC GTCTGATAGCAGGAATTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSRKLNFGWLLLGVAMTAGAQEKPADFAAQVPLSVSGAGPWYRLELPLNVQLQARQTDLSDLRVFNAAGEPQAYALARES AQTRDDGQLHEVKWFPLYNSADATERAPSVRVQSTTTGTLVEVQPSSQLEAGEEVLRGWLLDASAIKAPLQQLFLDWTSE RDGFQRFSIEASDDLQHWQAWGEGQVARLTFADERVEQHEVALPGQSARYLRLLWDSPASAPVLTSAQLKSSDPRNLPLP LVWSPALAGSSGKPGEYTWQLPMGLNIERVQVELKQANSLAPVTLSGRRESSLPWQAISSGLLYRLTQNGQDVVQNELQL YGQTVQQLKLTVDERGGGLGEQAPSVKYAVRATQVIFLARGDGPYSLALGSPTVKTANLPLTTLIPDFKPEKLATLGKAT VQGEALATQTSTATTAATTDTHWKRFGLWAVLLLSVLFLAAMAFSLLRKPPAKS
Sequences:
>Translated_454_residues MSRKLNFGWLLLGVAMTAGAQEKPADFAAQVPLSVSGAGPWYRLELPLNVQLQARQTDLSDLRVFNAAGEPQAYALARES AQTRDDGQLHEVKWFPLYNSADATERAPSVRVQSTTTGTLVEVQPSSQLEAGEEVLRGWLLDASAIKAPLQQLFLDWTSE RDGFQRFSIEASDDLQHWQAWGEGQVARLTFADERVEQHEVALPGQSARYLRLLWDSPASAPVLTSAQLKSSDPRNLPLP LVWSPALAGSSGKPGEYTWQLPMGLNIERVQVELKQANSLAPVTLSGRRESSLPWQAISSGLLYRLTQNGQDVVQNELQL YGQTVQQLKLTVDERGGGLGEQAPSVKYAVRATQVIFLARGDGPYSLALGSPTVKTANLPLTTLIPDFKPEKLATLGKAT VQGEALATQTSTATTAATTDTHWKRFGLWAVLLLSVLFLAAMAFSLLRKPPAKS >Mature_453_residues SRKLNFGWLLLGVAMTAGAQEKPADFAAQVPLSVSGAGPWYRLELPLNVQLQARQTDLSDLRVFNAAGEPQAYALARESA QTRDDGQLHEVKWFPLYNSADATERAPSVRVQSTTTGTLVEVQPSSQLEAGEEVLRGWLLDASAIKAPLQQLFLDWTSER DGFQRFSIEASDDLQHWQAWGEGQVARLTFADERVEQHEVALPGQSARYLRLLWDSPASAPVLTSAQLKSSDPRNLPLPL VWSPALAGSSGKPGEYTWQLPMGLNIERVQVELKQANSLAPVTLSGRRESSLPWQAISSGLLYRLTQNGQDVVQNELQLY GQTVQQLKLTVDERGGGLGEQAPSVKYAVRATQVIFLARGDGPYSLALGSPTVKTANLPLTTLIPDFKPEKLATLGKATV QGEALATQTSTATTAATTDTHWKRFGLWAVLLLSVLFLAAMAFSLLRKPPAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49480; Mature: 49348
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKLNFGWLLLGVAMTAGAQEKPADFAAQVPLSVSGAGPWYRLELPLNVQLQARQTDLS CCCCCCCHHHEEHHHHHCCCCCCCCCHHEECCEEEECCCCEEEEEECCEEEEEECCCCHH DLRVFNAAGEPQAYALARESAQTRDDGQLHEVKWFPLYNSADATERAPSVRVQSTTTGTL HHEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCEE VEVQPSSQLEAGEEVLRGWLLDASAIKAPLQQLFLDWTSERDGFQRFSIEASDDLQHWQA EEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH WGEGQVARLTFADERVEQHEVALPGQSARYLRLLWDSPASAPVLTSAQLKSSDPRNLPLP CCCCCEEEEEECHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEHHHCCCCCCCCCCC LVWSPALAGSSGKPGEYTWQLPMGLNIERVQVELKQANSLAPVTLSGRRESSLPWQAISS EEECCCCCCCCCCCCCEEEECCCCCCHHHEEEEEHHCCCCCCEEECCCCCCCCCHHHHCC GLLYRLTQNGQDVVQNELQLYGQTVQQLKLTVDERGGGLGEQAPSVKYAVRATQVIFLAR CEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEE GDGPYSLALGSPTVKTANLPLTTLIPDFKPEKLATLGKATVQGEALATQTSTATTAATTD CCCCEEEEECCCCEEECCCCHHHCCCCCCCHHHHHHCCHHCCCCEEEECCCCCEEECCCC THWKRFGLWAVLLLSVLFLAAMAFSLLRKPPAKS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRKLNFGWLLLGVAMTAGAQEKPADFAAQVPLSVSGAGPWYRLELPLNVQLQARQTDLS CCCCCCHHHEEHHHHHCCCCCCCCCHHEECCEEEECCCCEEEEEECCEEEEEECCCCHH DLRVFNAAGEPQAYALARESAQTRDDGQLHEVKWFPLYNSADATERAPSVRVQSTTTGTL HHEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCEE VEVQPSSQLEAGEEVLRGWLLDASAIKAPLQQLFLDWTSERDGFQRFSIEASDDLQHWQA EEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH WGEGQVARLTFADERVEQHEVALPGQSARYLRLLWDSPASAPVLTSAQLKSSDPRNLPLP CCCCCEEEEEECHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEHHHCCCCCCCCCCC LVWSPALAGSSGKPGEYTWQLPMGLNIERVQVELKQANSLAPVTLSGRRESSLPWQAISS EEECCCCCCCCCCCCCEEEECCCCCCHHHEEEEEHHCCCCCCEEECCCCCCCCCHHHHCC GLLYRLTQNGQDVVQNELQLYGQTVQQLKLTVDERGGGLGEQAPSVKYAVRATQVIFLAR CEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEE GDGPYSLALGSPTVKTANLPLTTLIPDFKPEKLATLGKATVQGEALATQTSTATTAATTD CCCCEEEEECCCCEEECCCCHHHCCCCCCCHHHHHHCCHHCCCCEEEECCCCCEEECCCC THWKRFGLWAVLLLSVLFLAAMAFSLLRKPPAKS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA