Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77456556

Identifier: 77456556

GI number: 77456556

Start: 372691

End: 373446

Strand: Direct

Name: 77456556

Synonym: Pfl01_0328

Alternate gene names: NA

Gene position: 372691-373446 (Clockwise)

Preceding gene: 77456555

Following gene: 77456562

Centisome position: 5.79

GC content: 59.26

Gene sequence:

>756_bases
ATGATCAAACGCCTGCTTCTCGCCCTCGCCAGTGCCTCCGTGTTGTTGATCAACACCGGCCACGCCGAGGAAAGTCCCGA
CACCGATCTGGTGCTCCTCACCGAAAACTTCCCGCCGTACAACATGGCGAAGAACGGCAAGAATTTCGCCCAGGATGAAA
ACATCAACGGCATCGCCACGGACATCGTGCGCGAGATGTTCAAGCGTGCCGGCATCACTTACAGCCTGACCCTGCGCTTC
CCCTGGGAGCGGGTCTACAAGCTGGCGCTGGAAAATCCCGGTTACGGTGCGTTCGTCATGGCGCGGCTGCCGGATCGCGA
AAAGCTCTTCAAATGGGTCGGCCCGATCGGCCCGGACGACTGGGTCATGTTGGCCAAGGCCGACAGCAAGATCACCCTCG
AAACCCTCAATGATGCGCGCAAGTACAAGATCGGCGCCTACAAGGGTGATGCGATTGCCGAGACTTTGACCAAACAGGGG
CTGAAGCCGGTGGTGGTGCTGCGTGATCAGGACAACGCCAGGAAACTCGTCAGCGGTCAGATCGATCTGTGGGCCACCGG
CGATCCTGCCGGCCGTTATCTGGCACGGCAGGATGGCGTGACCGGGTTGAAAACCGTACTGCGCTTCAACAGTGCCGAAC
TGTATCTGGCACTGAACAAAGACGTGCCCGATGCAACGGTTGCCCGGTTGCAGGCCGAGCTGGATCAGATGCGCAAGGAC
GGTGTGGTCGATGAGATCATGGGACGGTATTTGTAG

Upstream 100 bases:

>100_bases
AAACGCGGCATCGTAATGCGTTAAACATCCATACAGGCCAGTGGACAGCATGGCGTACCCAAGGCACTCTTGGGCACGCC
ATGGATTTCGGTAGCCCGAC

Downstream 100 bases:

>100_bases
CGACTTCTTCCTCTGTCGTCGGCTGAGGGGCGAAACCGATATTGTCGCGGTCACTGTCTGAATGGCCTTCGCTTGATGGC
GGCTCTGTCGCCAGTTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Periplasmic Protein; ABC-Type Amino Acid Transport/Signal Transduction Systems; ABC-Type Amino Acid Transporter; Amino Acid ABC Transporter; ABC Amino Acid Transporter Periplasmic Protein; Cache Sensor Protein

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFAQDENINGIATDIVREMFKRAGITYSLTLRF
PWERVYKLALENPGYGAFVMARLPDREKLFKWVGPIGPDDWVMLAKADSKITLETLNDARKYKIGAYKGDAIAETLTKQG
LKPVVVLRDQDNARKLVSGQIDLWATGDPAGRYLARQDGVTGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKD
GVVDEIMGRYL

Sequences:

>Translated_251_residues
MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFAQDENINGIATDIVREMFKRAGITYSLTLRF
PWERVYKLALENPGYGAFVMARLPDREKLFKWVGPIGPDDWVMLAKADSKITLETLNDARKYKIGAYKGDAIAETLTKQG
LKPVVVLRDQDNARKLVSGQIDLWATGDPAGRYLARQDGVTGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKD
GVVDEIMGRYL
>Mature_251_residues
MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFAQDENINGIATDIVREMFKRAGITYSLTLRF
PWERVYKLALENPGYGAFVMARLPDREKLFKWVGPIGPDDWVMLAKADSKITLETLNDARKYKIGAYKGDAIAETLTKQG
LKPVVVLRDQDNARKLVSGQIDLWATGDPAGRYLARQDGVTGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKD
GVVDEIMGRYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28003; Mature: 28003

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFAQDENINGIAT
CHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH
DIVREMFKRAGITYSLTLRFPWERVYKLALENPGYGAFVMARLPDREKLFKWVGPIGPDD
HHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCC
WVMLAKADSKITLETLNDARKYKIGAYKGDAIAETLTKQGLKPVVVLRDQDNARKLVSGQ
EEEEEECCCEEEEEECCCCHHEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHCCC
IDLWATGDPAGRYLARQDGVTGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKD
EEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHC
GVVDEIMGRYL
CCHHHHHHHCC
>Mature Secondary Structure
MIKRLLLALASASVLLINTGHAEESPDTDLVLLTENFPPYNMAKNGKNFAQDENINGIAT
CHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH
DIVREMFKRAGITYSLTLRFPWERVYKLALENPGYGAFVMARLPDREKLFKWVGPIGPDD
HHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCC
WVMLAKADSKITLETLNDARKYKIGAYKGDAIAETLTKQGLKPVVVLRDQDNARKLVSGQ
EEEEEECCCEEEEEECCCCHHEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHCCC
IDLWATGDPAGRYLARQDGVTGLKTVLRFNSAELYLALNKDVPDATVARLQAELDQMRKD
EEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHC
GVVDEIMGRYL
CCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA