| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is oxlT [H]
Identifier: 77456550
GI number: 77456550
Start: 367689
End: 369353
Strand: Direct
Name: oxlT [H]
Synonym: Pfl01_0322
Alternate gene names: 77456550
Gene position: 367689-369353 (Clockwise)
Preceding gene: 77456545
Following gene: 77456551
Centisome position: 5.71
GC content: 62.7
Gene sequence:
>1665_bases ATGAGCACGACCATTACGGCGGACGGCCTCAAAGCCGATCAGCCCGGGTTCCTGTCCAAGGAACGCATCATCGCCAAGCC CGGTTTCAACCGTTGGCTGGTTCCACCGGCCGCTCTGGCCATTCACCTGTGCATCGGCATGGCCTACGGCTTCTCGGTGT TCTGGTTGCCGCTGTCCAAGGCACTGGGCGTCACCGCTCCGGTGGCTTGCGCACCGGACATGAGCTTCATCGCACAAGTC TTCTCGTCGCAATGTGACTGGCCGATCTCCATGCTCGGCTGGATCTACACCCTGTTCTTCATCTTCCTCGGCTGCTCGGC AGCGATCTGGGGTGGCTGGCTTGAACACGCAGGACCACGCAAGGCCGGCGTTGTATCGGCATTGTGCTGGTGCGGCGGTC TGCTGATTTCTGCGCTGGGTATCTATACCCACCAGATCTGGCTGATGTGGATCGGCTCCGGTGTGATCGGCGGTATCGGT CTGGGTCTGGGCTACATCTCGCCGGTCTCGACCCTGATCAAGTGGTTCCCGGACAAGCGCGGCATGGCGACCGGCATGGC GATCATGGGCTTCGGCGGTGGCGCGATGGTTGGTGCACCACTGGCGACCGCTCTGATGAGCCATTTCGCTTCGCCGACTG GCGTGGGCGTGTGGCAGAGCTTCGTGGCCATGGCTGCGATCTACTTCGTGTTCATGATCGGTGGCGCGCTGGCTTACCGC GTACCGCCAACCGGCTGGAAGCCTGAAGGCTGGACCGCGCCAGCGAAAAAAGCCTCGAACGCGATGATCACCCACCGTCA CGTTCACGTGAATGTGGCGTGGAAAACCCCGCAATTCCGCCTGGTGTGGCTGGTGCTGTGCCTGAACGTGTCTGCCGGTA TCGGCATCCTCGGCATGGCTTCGCCACTGTTGCAGGAAGTGTTCGGTGGCAAGCTGCTGGGCAACGATCTGCCGTTCGGT CAGCTGGATGCCGGTCAACTGGCTTCCATCGCAGCGATTGCGGCCGGTTTCACCGGTCTGCTGAGCCTGTTCAACATCGG CGGTCGCTTCTTCTGGGCGTCGTTCTCGGACTACCTGGGCCGCAAGAACACTTACTTCGTGTTCTTCGCACTGGGCTTTG CGCTGTACGCACTGATCCCGAACCTCGGTCACCTGGGCAACGTTGCGCTGTTCGTGGCGGCGTTCTGCATCATCCTGTCG ATGTACGGCGGCGGTTTCGCGACCGTGCCGGCGTATCTGGCCGACCTGTTCGGTACGCAGATGGTCGGCGCGATCCACGG TCGTCTGCTGACGGCCTGGGCTGCCGCTGGCGTGCTGGGTCCGGTGCTGGTGAACTACCTGCGTGAGTATCAGCTGAGCA TCGGCGTTGAACGCGCCGCCGCTTACGACATCACCCTGTACATCCTCGCCGGCCTGCTGGTGCTGGGCTTCCTGTGCAAC CTGCTGGTGCGCCCGGTGGCGGACAAGTACTTCATGACTGACGCCGAACTGGCTGCCGAACAGGCGCTGGGTCACGACAA GGGTGCTGATGGCAGCACCGTGCTGGAGTGGAAAGCCGCGCCGGGCAGCAAGCCGCTGGCGATCGCTGCGTGGCTGGTGG TGGGAATTCCGTTGGCGTGGGGTGTGTGGGTGACCCTGCAGAAGACGGCGGTTCTGTTCCACTAA
Upstream 100 bases:
>100_bases TTTCAAGGAGCTTCACCCGTAAAAAACGGTCATGCCTGCGTGCATAAAGGCCGGGGTGGGCAGTGGCTGGCGAACCATAC TAATAATTGGGGGATACACA
Downstream 100 bases:
>100_bases GTAACCGTTAAAACGCAGAACCCCTGTGGGAGCGGGCTTGCCCGCTCCCACATTTGTTTCCGGGTGCCTGTAATGGCTTG TATGGACATGTCTACCCGCG
Product: major facilitator transporter
Products: NA
Alternate protein names: OFA; Oxalate:formate antiport protein; Oxalate:formate exchange protein [H]
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MSTTITADGLKADQPGFLSKERIIAKPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKALGVTAPVACAPDMSFIAQV FSSQCDWPISMLGWIYTLFFIFLGCSAAIWGGWLEHAGPRKAGVVSALCWCGGLLISALGIYTHQIWLMWIGSGVIGGIG LGLGYISPVSTLIKWFPDKRGMATGMAIMGFGGGAMVGAPLATALMSHFASPTGVGVWQSFVAMAAIYFVFMIGGALAYR VPPTGWKPEGWTAPAKKASNAMITHRHVHVNVAWKTPQFRLVWLVLCLNVSAGIGILGMASPLLQEVFGGKLLGNDLPFG QLDAGQLASIAAIAAGFTGLLSLFNIGGRFFWASFSDYLGRKNTYFVFFALGFALYALIPNLGHLGNVALFVAAFCIILS MYGGGFATVPAYLADLFGTQMVGAIHGRLLTAWAAAGVLGPVLVNYLREYQLSIGVERAAAYDITLYILAGLLVLGFLCN LLVRPVADKYFMTDAELAAEQALGHDKGADGSTVLEWKAAPGSKPLAIAAWLVVGIPLAWGVWVTLQKTAVLFH
Sequences:
>Translated_554_residues MSTTITADGLKADQPGFLSKERIIAKPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKALGVTAPVACAPDMSFIAQV FSSQCDWPISMLGWIYTLFFIFLGCSAAIWGGWLEHAGPRKAGVVSALCWCGGLLISALGIYTHQIWLMWIGSGVIGGIG LGLGYISPVSTLIKWFPDKRGMATGMAIMGFGGGAMVGAPLATALMSHFASPTGVGVWQSFVAMAAIYFVFMIGGALAYR VPPTGWKPEGWTAPAKKASNAMITHRHVHVNVAWKTPQFRLVWLVLCLNVSAGIGILGMASPLLQEVFGGKLLGNDLPFG QLDAGQLASIAAIAAGFTGLLSLFNIGGRFFWASFSDYLGRKNTYFVFFALGFALYALIPNLGHLGNVALFVAAFCIILS MYGGGFATVPAYLADLFGTQMVGAIHGRLLTAWAAAGVLGPVLVNYLREYQLSIGVERAAAYDITLYILAGLLVLGFLCN LLVRPVADKYFMTDAELAAEQALGHDKGADGSTVLEWKAAPGSKPLAIAAWLVVGIPLAWGVWVTLQKTAVLFH >Mature_553_residues STTITADGLKADQPGFLSKERIIAKPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKALGVTAPVACAPDMSFIAQVF SSQCDWPISMLGWIYTLFFIFLGCSAAIWGGWLEHAGPRKAGVVSALCWCGGLLISALGIYTHQIWLMWIGSGVIGGIGL GLGYISPVSTLIKWFPDKRGMATGMAIMGFGGGAMVGAPLATALMSHFASPTGVGVWQSFVAMAAIYFVFMIGGALAYRV PPTGWKPEGWTAPAKKASNAMITHRHVHVNVAWKTPQFRLVWLVLCLNVSAGIGILGMASPLLQEVFGGKLLGNDLPFGQ LDAGQLASIAAIAAGFTGLLSLFNIGGRFFWASFSDYLGRKNTYFVFFALGFALYALIPNLGHLGNVALFVAAFCIILSM YGGGFATVPAYLADLFGTQMVGAIHGRLLTAWAAAGVLGPVLVNYLREYQLSIGVERAAAYDITLYILAGLLVLGFLCNL LVRPVADKYFMTDAELAAEQALGHDKGADGSTVLEWKAAPGSKPLAIAAWLVVGIPLAWGVWVTLQKTAVLFH
Specific function: Anion transporter that carries out the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation, at the plasma membrane, and in doing so catalyzes the vectorial portion of a proton-motive metabolic cycle that drives ATP
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. OFA (TC 2.A.1.11) family [H]
Homologues:
Organism=Escherichia coli, GI1789969, Length=365, Percent_Identity=21.6438356164384, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 58900; Mature: 58769
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTITADGLKADQPGFLSKERIIAKPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSK CCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALGVTAPVACAPDMSFIAQVFSSQCDWPISMLGWIYTLFFIFLGCSAAIWGGWLEHAGPR HCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KAGVVSALCWCGGLLISALGIYTHQIWLMWIGSGVIGGIGLGLGYISPVSTLIKWFPDKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GMATGMAIMGFGGGAMVGAPLATALMSHFASPTGVGVWQSFVAMAAIYFVFMIGGALAYR CCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEE VPPTGWKPEGWTAPAKKASNAMITHRHVHVNVAWKTPQFRLVWLVLCLNVSAGIGILGMA CCCCCCCCCCCCCCHHHCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHH SPLLQEVFGGKLLGNDLPFGQLDAGQLASIAAIAAGFTGLLSLFNIGGRFFWASFSDYLG HHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCC RKNTYFVFFALGFALYALIPNLGHLGNVALFVAAFCIILSMYGGGFATVPAYLADLFGTQ CCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH MVGAIHGRLLTAWAAAGVLGPVLVNYLREYQLSIGVERAAAYDITLYILAGLLVLGFLCN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LLVRPVADKYFMTDAELAAEQALGHDKGADGSTVLEWKAAPGSKPLAIAAWLVVGIPLAW HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH GVWVTLQKTAVLFH HHHHEEEHHHEECC >Mature Secondary Structure STTITADGLKADQPGFLSKERIIAKPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSK CCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALGVTAPVACAPDMSFIAQVFSSQCDWPISMLGWIYTLFFIFLGCSAAIWGGWLEHAGPR HCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KAGVVSALCWCGGLLISALGIYTHQIWLMWIGSGVIGGIGLGLGYISPVSTLIKWFPDKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GMATGMAIMGFGGGAMVGAPLATALMSHFASPTGVGVWQSFVAMAAIYFVFMIGGALAYR CCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEE VPPTGWKPEGWTAPAKKASNAMITHRHVHVNVAWKTPQFRLVWLVLCLNVSAGIGILGMA CCCCCCCCCCCCCCHHHCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHH SPLLQEVFGGKLLGNDLPFGQLDAGQLASIAAIAAGFTGLLSLFNIGGRFFWASFSDYLG HHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHCC RKNTYFVFFALGFALYALIPNLGHLGNVALFVAAFCIILSMYGGGFATVPAYLADLFGTQ CCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH MVGAIHGRLLTAWAAAGVLGPVLVNYLREYQLSIGVERAAAYDITLYILAGLLVLGFLCN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LLVRPVADKYFMTDAELAAEQALGHDKGADGSTVLEWKAAPGSKPLAIAAWLVVGIPLAW HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH GVWVTLQKTAVLFH HHHHEEEHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8636101; 9651403; 11919184; 11113128; 11274108; 11500368 [H]