Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77456522

Identifier: 77456522

GI number: 77456522

Start: 343619

End: 344287

Strand: Direct

Name: 77456522

Synonym: Pfl01_0294

Alternate gene names: NA

Gene position: 343619-344287 (Clockwise)

Preceding gene: 77456520

Following gene: 77456523

Centisome position: 5.34

GC content: 57.1

Gene sequence:

>669_bases
ATGACCCTTCATTACATCTACGACCCGCTGTGCGGCTGGTGCTATGGCGCCAAACCACTGGTGCAGGCCGCGCAACAAGT
GCTGCCGGTAATCGCCCACGCCGGCGGCATGATGACCGGTGCCAACCGCCAGAGCGTTTCGCCGCAACTGCGCAATTACG
TGATGCCTCATGACCGGCGCATCGCTGAATACACCGGTCAGCCATTCGGCGAAGCTTATTTCGAAGGTCTTTTGCGTGAT
CAATCGGCGTTGTTTGATTCGGCACCTCCGATTGCCGCTGTGATGGCAGCGGAAAAAATCGACGGTCGTGGCCTGGAACT
GCTTGGCCGTTTGCAGACTGCGCACTATGTGGAAGGGCGGCGAATTGCCGATGAAAGTGTGCTTGTGGAATATGCAGTAG
AGCAGGGCTACAACGCCGATATGTTCTTGAATGCCTTGCAGTCCGTCGACACCGAACAACATATAAAGAACAGCCGTGCC
CTGTTGGCAAAACTGGGTGGGCAGGGTTTTCCAACTTTTGCGCTGGAACAGGACGGACGATTCACGCTGGTTGATATCGG
GCCGTGGCTCGGCAAACCAGAAGCCTTCGCCCAATGGTTGAGCGAGTCGTTTACGCCTGCGCCAGGGACTGAAACCCTGC
CGGTCTGTGGCCTCGATGGTTGCGCGTAA

Upstream 100 bases:

>100_bases
TTGCCGAAACAGACTGAAAGCCATTCCGGCGTTTTTCCGCAACGACCGAGGGACTAATGTGCCGACATTATTTTTCTCAC
CTTCTTGCCGGAGTTTTCCG

Downstream 100 bases:

>100_bases
TCCAGCATCAAAATCCCTGACTGCGGGCAATTCCGTGCACGAAGCCACCGCAAAATTTACTTTTTTTAGACGTTTTTCGC
CTATTTAAAGACGATTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: DSBA Oxidoreductase; Thioredoxin Domain-Containing Protein; Thioredoxin; Thioredoxin Domain Protein DsbA Family; DSBA-Like Thioredoxin Domain-Containing Protein; Dsba Oxidoreductase; Thioredoxin Domain-Containing Protein DsbA Family; Thioredoxin-Like Fold; Dithiol-Disulfide Isomerase

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTLHYIYDPLCGWCYGAKPLVQAAQQVLPVIAHAGGMMTGANRQSVSPQLRNYVMPHDRRIAEYTGQPFGEAYFEGLLRD
QSALFDSAPPIAAVMAAEKIDGRGLELLGRLQTAHYVEGRRIADESVLVEYAVEQGYNADMFLNALQSVDTEQHIKNSRA
LLAKLGGQGFPTFALEQDGRFTLVDIGPWLGKPEAFAQWLSESFTPAPGTETLPVCGLDGCA

Sequences:

>Translated_222_residues
MTLHYIYDPLCGWCYGAKPLVQAAQQVLPVIAHAGGMMTGANRQSVSPQLRNYVMPHDRRIAEYTGQPFGEAYFEGLLRD
QSALFDSAPPIAAVMAAEKIDGRGLELLGRLQTAHYVEGRRIADESVLVEYAVEQGYNADMFLNALQSVDTEQHIKNSRA
LLAKLGGQGFPTFALEQDGRFTLVDIGPWLGKPEAFAQWLSESFTPAPGTETLPVCGLDGCA
>Mature_221_residues
TLHYIYDPLCGWCYGAKPLVQAAQQVLPVIAHAGGMMTGANRQSVSPQLRNYVMPHDRRIAEYTGQPFGEAYFEGLLRDQ
SALFDSAPPIAAVMAAEKIDGRGLELLGRLQTAHYVEGRRIADESVLVEYAVEQGYNADMFLNALQSVDTEQHIKNSRAL
LAKLGGQGFPTFALEQDGRFTLVDIGPWLGKPEAFAQWLSESFTPAPGTETLPVCGLDGCA

Specific function: Unknown

COG id: COG3531

COG function: function code O; Predicted protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24220; Mature: 24089

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHYIYDPLCGWCYGAKPLVQAAQQVLPVIAHAGGMMTGANRQSVSPQLRNYVMPHDRR
CEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCH
IAEYTGQPFGEAYFEGLLRDQSALFDSAPPIAAVMAAEKIDGRGLELLGRLQTAHYVEGR
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
RIADESVLVEYAVEQGYNADMFLNALQSVDTEQHIKNSRALLAKLGGQGFPTFALEQDGR
HHCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
FTLVDIGPWLGKPEAFAQWLSESFTPAPGTETLPVCGLDGCA
EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLHYIYDPLCGWCYGAKPLVQAAQQVLPVIAHAGGMMTGANRQSVSPQLRNYVMPHDRR
EEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCH
IAEYTGQPFGEAYFEGLLRDQSALFDSAPPIAAVMAAEKIDGRGLELLGRLQTAHYVEGR
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
RIADESVLVEYAVEQGYNADMFLNALQSVDTEQHIKNSRALLAKLGGQGFPTFALEQDGR
HHCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
FTLVDIGPWLGKPEAFAQWLSESFTPAPGTETLPVCGLDGCA
EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA