| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456522
Identifier: 77456522
GI number: 77456522
Start: 343619
End: 344287
Strand: Direct
Name: 77456522
Synonym: Pfl01_0294
Alternate gene names: NA
Gene position: 343619-344287 (Clockwise)
Preceding gene: 77456520
Following gene: 77456523
Centisome position: 5.34
GC content: 57.1
Gene sequence:
>669_bases ATGACCCTTCATTACATCTACGACCCGCTGTGCGGCTGGTGCTATGGCGCCAAACCACTGGTGCAGGCCGCGCAACAAGT GCTGCCGGTAATCGCCCACGCCGGCGGCATGATGACCGGTGCCAACCGCCAGAGCGTTTCGCCGCAACTGCGCAATTACG TGATGCCTCATGACCGGCGCATCGCTGAATACACCGGTCAGCCATTCGGCGAAGCTTATTTCGAAGGTCTTTTGCGTGAT CAATCGGCGTTGTTTGATTCGGCACCTCCGATTGCCGCTGTGATGGCAGCGGAAAAAATCGACGGTCGTGGCCTGGAACT GCTTGGCCGTTTGCAGACTGCGCACTATGTGGAAGGGCGGCGAATTGCCGATGAAAGTGTGCTTGTGGAATATGCAGTAG AGCAGGGCTACAACGCCGATATGTTCTTGAATGCCTTGCAGTCCGTCGACACCGAACAACATATAAAGAACAGCCGTGCC CTGTTGGCAAAACTGGGTGGGCAGGGTTTTCCAACTTTTGCGCTGGAACAGGACGGACGATTCACGCTGGTTGATATCGG GCCGTGGCTCGGCAAACCAGAAGCCTTCGCCCAATGGTTGAGCGAGTCGTTTACGCCTGCGCCAGGGACTGAAACCCTGC CGGTCTGTGGCCTCGATGGTTGCGCGTAA
Upstream 100 bases:
>100_bases TTGCCGAAACAGACTGAAAGCCATTCCGGCGTTTTTCCGCAACGACCGAGGGACTAATGTGCCGACATTATTTTTCTCAC CTTCTTGCCGGAGTTTTCCG
Downstream 100 bases:
>100_bases TCCAGCATCAAAATCCCTGACTGCGGGCAATTCCGTGCACGAAGCCACCGCAAAATTTACTTTTTTTAGACGTTTTTCGC CTATTTAAAGACGATTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: DSBA Oxidoreductase; Thioredoxin Domain-Containing Protein; Thioredoxin; Thioredoxin Domain Protein DsbA Family; DSBA-Like Thioredoxin Domain-Containing Protein; Dsba Oxidoreductase; Thioredoxin Domain-Containing Protein DsbA Family; Thioredoxin-Like Fold; Dithiol-Disulfide Isomerase
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTLHYIYDPLCGWCYGAKPLVQAAQQVLPVIAHAGGMMTGANRQSVSPQLRNYVMPHDRRIAEYTGQPFGEAYFEGLLRD QSALFDSAPPIAAVMAAEKIDGRGLELLGRLQTAHYVEGRRIADESVLVEYAVEQGYNADMFLNALQSVDTEQHIKNSRA LLAKLGGQGFPTFALEQDGRFTLVDIGPWLGKPEAFAQWLSESFTPAPGTETLPVCGLDGCA
Sequences:
>Translated_222_residues MTLHYIYDPLCGWCYGAKPLVQAAQQVLPVIAHAGGMMTGANRQSVSPQLRNYVMPHDRRIAEYTGQPFGEAYFEGLLRD QSALFDSAPPIAAVMAAEKIDGRGLELLGRLQTAHYVEGRRIADESVLVEYAVEQGYNADMFLNALQSVDTEQHIKNSRA LLAKLGGQGFPTFALEQDGRFTLVDIGPWLGKPEAFAQWLSESFTPAPGTETLPVCGLDGCA >Mature_221_residues TLHYIYDPLCGWCYGAKPLVQAAQQVLPVIAHAGGMMTGANRQSVSPQLRNYVMPHDRRIAEYTGQPFGEAYFEGLLRDQ SALFDSAPPIAAVMAAEKIDGRGLELLGRLQTAHYVEGRRIADESVLVEYAVEQGYNADMFLNALQSVDTEQHIKNSRAL LAKLGGQGFPTFALEQDGRFTLVDIGPWLGKPEAFAQWLSESFTPAPGTETLPVCGLDGCA
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24220; Mature: 24089
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHYIYDPLCGWCYGAKPLVQAAQQVLPVIAHAGGMMTGANRQSVSPQLRNYVMPHDRR CEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCH IAEYTGQPFGEAYFEGLLRDQSALFDSAPPIAAVMAAEKIDGRGLELLGRLQTAHYVEGR HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC RIADESVLVEYAVEQGYNADMFLNALQSVDTEQHIKNSRALLAKLGGQGFPTFALEQDGR HHCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC FTLVDIGPWLGKPEAFAQWLSESFTPAPGTETLPVCGLDGCA EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLHYIYDPLCGWCYGAKPLVQAAQQVLPVIAHAGGMMTGANRQSVSPQLRNYVMPHDRR EEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCH IAEYTGQPFGEAYFEGLLRDQSALFDSAPPIAAVMAAEKIDGRGLELLGRLQTAHYVEGR HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC RIADESVLVEYAVEQGYNADMFLNALQSVDTEQHIKNSRALLAKLGGQGFPTFALEQDGR HHCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCC FTLVDIGPWLGKPEAFAQWLSESFTPAPGTETLPVCGLDGCA EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA