| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is cysQ [H]
Identifier: 77456513
GI number: 77456513
Start: 331172
End: 331999
Strand: Direct
Name: cysQ [H]
Synonym: Pfl01_0285
Alternate gene names: 77456513
Gene position: 331172-331999 (Clockwise)
Preceding gene: 77456512
Following gene: 77456518
Centisome position: 5.14
GC content: 64.37
Gene sequence:
>828_bases ATGAATTTTCCCCATCCGTTGATGGCGCCGGTGGTCGAGCTGGCATTGCGGGCCGGTGAGGCGATTTTGCCGTTCTGGCG TGCCGATGTGGCCGTCACCGCCAAGTCCGATGATTCACCGGTGACGGCGGCGGACATGGCCGCTCACCACGTGATCGTGG CCGGCCTGACAGCGCTGGATCCGAGCATTCCGGTGCTGTCCGAAGAGGACGCCGACATCCCGCAAAGCGTGCGTGCAGGC TGGCAGCGCTGGTGGCTGGTGGACCCGCTGGATGGCACCAAGGAGTTCATCAGCGGCAGCGAAGAATTCACCGTCAATAT CGCGTTGATCGAGAATGGCCGGGTGGTGTTCGGTGTGGTGTCGATGCCGACCAACGGTCGCTTCTACGTTGGCGGAGCCG GGCTCGGTGCCTGGCGCGGCGACACGGGCGGCACGCCGGTGGCGATTCAGGTGCGTGATGTGCCGGGGCCGGGCGAAGCG TTCACCGTGGTTGCCAGCCGCCGTCATTCGAGTCCGGAGCAGGAACGCTTGCTGGCCGGATTGAGTGCCAGCCTTGGCGA GTTGCAACTGGCCAACATCGGCAGTTCGCTGAAGTTCTGTCTGCTCGCCGAAGGGGCGGCCGATTGTTACCCGCGACTGG CGCCGACGTCCCAGTGGGACACAGCGGCGGCGCAGGGCGTTCTGGAAGGCGCCGGCGGCGAGGTTCTGGATTTGAACGGT GACGCGTTCTGCTATCCACCACGGGATTCGTTACGCAACGCGTTCTTTCTTGCACTGCCGGCAAAAGCGGCGTGGCGTTC GAAGTTGCTGGAACTGGCCCATTCGTAA
Upstream 100 bases:
>100_bases AGAATCCGAATTTCAGTGAGGGGCGCGCCCTGGCGGCGCTATACCTGACCCGCGACCTGCTGACCCAGCGCGGATTTTTC CAGTCATGAGTGAGATGCCA
Downstream 100 bases:
>100_bases CAGCGCTCCCGGCCCGGAGCGCCAAGCCCTCAGCGGTGCAGGACGTACTGCCCGCTGAAGGTCACTGCATCCTCATTGCT ACCGGCATTGACGACCCGCG
Product: 3(2),5 -bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNFPHPLMAPVVELALRAGEAILPFWRADVAVTAKSDDSPVTAADMAAHHVIVAGLTALDPSIPVLSEEDADIPQSVRAG WQRWWLVDPLDGTKEFISGSEEFTVNIALIENGRVVFGVVSMPTNGRFYVGGAGLGAWRGDTGGTPVAIQVRDVPGPGEA FTVVASRRHSSPEQERLLAGLSASLGELQLANIGSSLKFCLLAEGAADCYPRLAPTSQWDTAAAQGVLEGAGGEVLDLNG DAFCYPPRDSLRNAFFLALPAKAAWRSKLLELAHS
Sequences:
>Translated_275_residues MNFPHPLMAPVVELALRAGEAILPFWRADVAVTAKSDDSPVTAADMAAHHVIVAGLTALDPSIPVLSEEDADIPQSVRAG WQRWWLVDPLDGTKEFISGSEEFTVNIALIENGRVVFGVVSMPTNGRFYVGGAGLGAWRGDTGGTPVAIQVRDVPGPGEA FTVVASRRHSSPEQERLLAGLSASLGELQLANIGSSLKFCLLAEGAADCYPRLAPTSQWDTAAAQGVLEGAGGEVLDLNG DAFCYPPRDSLRNAFFLALPAKAAWRSKLLELAHS >Mature_275_residues MNFPHPLMAPVVELALRAGEAILPFWRADVAVTAKSDDSPVTAADMAAHHVIVAGLTALDPSIPVLSEEDADIPQSVRAG WQRWWLVDPLDGTKEFISGSEEFTVNIALIENGRVVFGVVSMPTNGRFYVGGAGLGAWRGDTGGTPVAIQVRDVPGPGEA FTVVASRRHSSPEQERLLAGLSASLGELQLANIGSSLKFCLLAEGAADCYPRLAPTSQWDTAAAQGVLEGAGGEVLDLNG DAFCYPPRDSLRNAFFLALPAKAAWRSKLLELAHS
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=252, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI221625487, Length=246, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI7657236, Length=237, Percent_Identity=29.535864978903, Blast_Score=75, Evalue=7e-14, Organism=Escherichia coli, GI1790659, Length=252, Percent_Identity=48.4126984126984, Blast_Score=191, Evalue=4e-50, Organism=Escherichia coli, GI1788882, Length=247, Percent_Identity=26.7206477732794, Blast_Score=64, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71995905, Length=250, Percent_Identity=25.2, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71995897, Length=250, Percent_Identity=25.2, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324508, Length=281, Percent_Identity=24.9110320284698, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI24651149, Length=274, Percent_Identity=29.1970802919708, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24664918, Length=248, Percent_Identity=28.2258064516129, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24641722, Length=275, Percent_Identity=26.1818181818182, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 29097; Mature: 29097
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFPHPLMAPVVELALRAGEAILPFWRADVAVTAKSDDSPVTAADMAAHHVIVAGLTALD CCCCCHHHHHHHHHHHHCCCEECCEEECCEEEEECCCCCCCCHHHHHHHHHEEEHHHHCC PSIPVLSEEDADIPQSVRAGWQRWWLVDPLDGTKEFISGSEEFTVNIALIENGRVVFGVV CCCCCCCCCCCCCCHHHHCCHHEEEEECCCCCHHHHHCCCCEEEEEEEEEECCEEEEEEE SMPTNGRFYVGGAGLGAWRGDTGGTPVAIQVRDVPGPGEAFTVVASRRHSSPEQERLLAG ECCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHH LSASLGELQLANIGSSLKFCLLAEGAADCYPRLAPTSQWDTAAAQGVLEGAGGEVLDLNG HCCCCCCEEEECCCCCEEEEEEECCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCC DAFCYPPRDSLRNAFFLALPAKAAWRSKLLELAHS CEEEECCHHHHCCEEEEEECCHHHHHHHHHHHHCC >Mature Secondary Structure MNFPHPLMAPVVELALRAGEAILPFWRADVAVTAKSDDSPVTAADMAAHHVIVAGLTALD CCCCCHHHHHHHHHHHHCCCEECCEEECCEEEEECCCCCCCCHHHHHHHHHEEEHHHHCC PSIPVLSEEDADIPQSVRAGWQRWWLVDPLDGTKEFISGSEEFTVNIALIENGRVVFGVV CCCCCCCCCCCCCCHHHHCCHHEEEEECCCCCHHHHHCCCCEEEEEEEEEECCEEEEEEE SMPTNGRFYVGGAGLGAWRGDTGGTPVAIQVRDVPGPGEAFTVVASRRHSSPEQERLLAG ECCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHH LSASLGELQLANIGSSLKFCLLAEGAADCYPRLAPTSQWDTAAAQGVLEGAGGEVLDLNG HCCCCCCEEEECCCCCEEEEEEECCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCC DAFCYPPRDSLRNAFFLALPAKAAWRSKLLELAHS CEEEECCHHHHCCEEEEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]