| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is tauA [H]
Identifier: 77456484
GI number: 77456484
Start: 301537
End: 302514
Strand: Reverse
Name: tauA [H]
Synonym: Pfl01_0256
Alternate gene names: 77456484
Gene position: 302514-301537 (Counterclockwise)
Preceding gene: 77456485
Following gene: 77456483
Centisome position: 4.7
GC content: 62.78
Gene sequence:
>978_bases ATGAAACTGAATTTCCCGCTTCGCCTGCTGGCCGTGGCCTCTCTGGCCGCTGCGAGTTTCCTGGCTCAGGCCGCCGACCT CACCGTCGCCTACCAGACCACCGTTGACCCGGCGAAAGTCGCCCAGGCCGACGGTGCCTACGAGAAAGCCACCAAGGCTG ACATCAACTGGCGCAAATTCGATAACGGCGCCGACATCATTGCCGCCATCGCGTCCGGTGACGTGCAGATCGGTTACCTC GGTTCCAGCCCGCTGACCGCCGCGATCACCCGCAAAGTTCCGGTGGAAACCTTCCTCATCGCCACCCAGATCGGCGCCGC CGAAGCACTGGTCGCCCGCGACGGCTCTGGCATCAAGACGCCGCAGGATCTGGTCGGCAAGAAAATCGCCGTGCCGTTCG TGTCCACCGGTCACTACAGCCTGCTGGCCGCGCTGAAGCACTGGAACATCGATCCATCGAAAGTCACCGTCCTCAACCTC GCCCCGCCAGCGATCATTGCTGCGTGGAAACGCGGTGACATCGACGCTACCTACGTCTGGGATCCGGCGCTGGGTGTGGC CAAGGAAAACGGCAAAGTGCTGATCACATCCGGTGAACTGGCCAAGTTCGGCGCGCCGACCTTCGACGCCTGGATCGTGC GCAAGGACTTCGCCGAGAAGCACCCGGAAATCGTCACCGCCTTCGCCAAGGTCACCCTCGACGCCTACGCCGACTACCGC AAGGATCCGAAAGCCTGGCTCGCCAACCAGAGCAACGTCGACAAGCTGGTGAAGCTCTCCGGCGCCAAGGCCAGCGACAT CCCATTGCTGCTGCAAGGTAACGTCTACCCGCTGGCGGCGGATCAGGTCAGTGACCTCGGCGCGCCGACCACCAAAGCCA TCACCGATACCGCCACGTTCCTCAAAGAACAAGGCAAGGTCGAAGCGGTGCTGCCGGACTACGCGCCGTACGTCAGCGCC AAGTACATCACCAACTGA
Upstream 100 bases:
>100_bases CGCTCATAAGCTCATTCTAAAAAGTTATTTATTTTTAGATTCTTAGATCATTTAGTCTCCTTTCACGCCGACGCTCGGTC GCCTGATATGGAGCTCTTCA
Downstream 100 bases:
>100_bases TCGGGAGTTAATCGCGATGGCCTTGCTACAGCTGGAGCGCATCAGCGCACAGTATCCCGGCAGCCCGGAACCGGTACTGT CCGACATTTCCCTGACCCTC
Product: taurine ABC transporter, periplasmic binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKLNFPLRLLAVASLAAASFLAQAADLTVAYQTTVDPAKVAQADGAYEKATKADINWRKFDNGADIIAAIASGDVQIGYL GSSPLTAAITRKVPVETFLIATQIGAAEALVARDGSGIKTPQDLVGKKIAVPFVSTGHYSLLAALKHWNIDPSKVTVLNL APPAIIAAWKRGDIDATYVWDPALGVAKENGKVLITSGELAKFGAPTFDAWIVRKDFAEKHPEIVTAFAKVTLDAYADYR KDPKAWLANQSNVDKLVKLSGAKASDIPLLLQGNVYPLAADQVSDLGAPTTKAITDTATFLKEQGKVEAVLPDYAPYVSA KYITN
Sequences:
>Translated_325_residues MKLNFPLRLLAVASLAAASFLAQAADLTVAYQTTVDPAKVAQADGAYEKATKADINWRKFDNGADIIAAIASGDVQIGYL GSSPLTAAITRKVPVETFLIATQIGAAEALVARDGSGIKTPQDLVGKKIAVPFVSTGHYSLLAALKHWNIDPSKVTVLNL APPAIIAAWKRGDIDATYVWDPALGVAKENGKVLITSGELAKFGAPTFDAWIVRKDFAEKHPEIVTAFAKVTLDAYADYR KDPKAWLANQSNVDKLVKLSGAKASDIPLLLQGNVYPLAADQVSDLGAPTTKAITDTATFLKEQGKVEAVLPDYAPYVSA KYITN >Mature_325_residues MKLNFPLRLLAVASLAAASFLAQAADLTVAYQTTVDPAKVAQADGAYEKATKADINWRKFDNGADIIAAIASGDVQIGYL GSSPLTAAITRKVPVETFLIATQIGAAEALVARDGSGIKTPQDLVGKKIAVPFVSTGHYSLLAALKHWNIDPSKVTVLNL APPAIIAAWKRGDIDATYVWDPALGVAKENGKVLITSGELAKFGAPTFDAWIVRKDFAEKHPEIVTAFAKVTLDAYADYR KDPKAWLANQSNVDKLVKLSGAKASDIPLLLQGNVYPLAADQVSDLGAPTTKAITDTATFLKEQGKVEAVLPDYAPYVSA KYITN
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG4521
COG function: function code P; ABC-type taurine transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=316, Percent_Identity=55.0632911392405, Blast_Score=363, Evalue=1e-102, Organism=Escherichia coli, GI87081803, Length=220, Percent_Identity=27.2727272727273, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 34537; Mature: 34537
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNFPLRLLAVASLAAASFLAQAADLTVAYQTTVDPAKVAQADGAYEKATKADINWRKF CCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHCCCCHHHHHHCCCCEEEE DNGADIIAAIASGDVQIGYLGSSPLTAAITRKVPVETFLIATQIGAAEALVARDGSGIKT CCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCHHHEEEEECCCCHHEEEECCCCCCCC PQDLVGKKIAVPFVSTGHYSLLAALKHWNIDPSKVTVLNLAPPAIIAAWKRGDIDATYVW CHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEE DPALGVAKENGKVLITSGELAKFGAPTFDAWIVRKDFAEKHPEIVTAFAKVTLDAYADYR CCCCCEEECCCEEEEECCCHHHCCCCCHHHHHEEHHHHHHCHHHHHHHHHHHHHHHHHCC KDPKAWLANQSNVDKLVKLSGAKASDIPLLLQGNVYPLAADQVSDLGAPTTKAITDTATF CCCHHHHCCCCCHHHHHHCCCCCCCCCCEEEECCEEEEEHHHHHHCCCCCHHHHHHHHHH LKEQGKVEAVLPDYAPYVSAKYITN HHHCCCEEEECCCCCCCCCEEECCC >Mature Secondary Structure MKLNFPLRLLAVASLAAASFLAQAADLTVAYQTTVDPAKVAQADGAYEKATKADINWRKF CCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHCCCCHHHHHHCCCCEEEE DNGADIIAAIASGDVQIGYLGSSPLTAAITRKVPVETFLIATQIGAAEALVARDGSGIKT CCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCHHHEEEEECCCCHHEEEECCCCCCCC PQDLVGKKIAVPFVSTGHYSLLAALKHWNIDPSKVTVLNLAPPAIIAAWKRGDIDATYVW CHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEE DPALGVAKENGKVLITSGELAKFGAPTFDAWIVRKDFAEKHPEIVTAFAKVTLDAYADYR CCCCCEEECCCEEEEECCCHHHCCCCCHHHHHEEHHHHHHCHHHHHHHHHHHHHHHHHCC KDPKAWLANQSNVDKLVKLSGAKASDIPLLLQGNVYPLAADQVSDLGAPTTKAITDTATF CCCHHHHCCCCCHHHHHHCCCCCCCCCCEEEECCEEEEEHHHHHHCCCCCHHHHHHHHHH LKEQGKVEAVLPDYAPYVSAKYITN HHHCCCEEEECCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]