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The map label for this gene is dcyD [H]

Identifier: 77456473

GI number: 77456473

Start: 288046

End: 289050

Strand: Reverse

Name: dcyD [H]

Synonym: Pfl01_0245

Alternate gene names: 77456473

Gene position: 289050-288046 (Counterclockwise)

Preceding gene: 77456476

Following gene: 77456472

Centisome position: 4.49

GC content: 64.58

Gene sequence:

>1005_bases
ATGTCCACACAACCGATCAAACAACAGCTGCAACGCTTCAACCGCCTCGACCTGCTCGGCCAACCGACCCCACTGGAAAA
GCTCGAGCGTCTGTCCACCTGGCTCGGCCGCGATGTCTACATCAAACGCGATGACCTGACGCCTTTGGCCATGGGCGGCA
ACAAGCTGCGCAAGCTCGAATACCTCGCCGCCGATGCCATCGCCCAAGGCGCGGATACCCTGATCACCGCCGGTGCACTG
CAATCGAACCACGTTCGCCAGACTGCCGCGCTGGCCGCCAAACTGGGCCTGGGTTGCGTAGCGCTGCTGGAAAACCCGCT
GGGCACCGACGACAGCAACTACACCGGCAACGGCAACCGCCTGCTGCTGGACCTGTTCGACACCAAGGTCGAGCTGGTCG
ACAACCTCGACAACGCCGACGAACAACTGGCCGCCCTCGCCGTGCGCCTGCGCAGCAACGGCAAGAAGCCGTATCTGGTG
CCGATCGGTGGCTCCAACGCCATCGGTGCGCTGGGTTATGTGCGCGCCGGTCTGGAGCTGGCAGAACAGATCAAGGACAC
CGGCCTGCAATTCTCCGCCGTCGTTTTGGCCTCTGGCAGCGCCGGTACTCACAGCGGTCTGGCGCTGGCCCTGAGCGAAG
CCCTGCCACAACTGCCGGTGATTGGCGTGACGGTGTCGCGCAGCGAAGAAGATCAGCGCCCGAAAGTCCAGGGCCTCGCC
GAACGCACCGCCGACCTGCTGGGTGTGGCGCTGCCGGACAGCTTCAAGGTCGAGTTGTGGGACGAATACTTCGGCCCGCG
CTATGGTGAGCCGAATGCCGGGACGCTGTCGGCGGTGAAGCTGCTGGCCAGCCAGGACGCCGTGTTGCTCGATCCGGTCT
ACACCGGCAAGGCCATGGCCGGACTGCTCGACGGCATCGGTCGCGGGCGTTTCGACGACGGCCCGATCATCTTCCTGCAC
ACCGGCGGCGCCCCGGCGTTGTTTGCGTACAAGGATTTTCTCTGA

Upstream 100 bases:

>100_bases
TAGTGCTGGACTAAGCACATTTGGCTATAAGCGATTGACGGTTGCCGCGGTAAATCGGCGTGCCTATAGTCCGGTGATCT
TCCTCCGCCAGTACGGAACC

Downstream 100 bases:

>100_bases
CGCGCTCGCTCCCACGCTCTGCGTGGGAACACAGCCCGGAATACGAAAAACGCATATTCCGCAGATGAATAACAAATGGA
AAATTCATTATTTTCCATTC

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSTQPIKQQLQRFNRLDLLGQPTPLEKLERLSTWLGRDVYIKRDDLTPLAMGGNKLRKLEYLAADAIAQGADTLITAGAL
QSNHVRQTAALAAKLGLGCVALLENPLGTDDSNYTGNGNRLLLDLFDTKVELVDNLDNADEQLAALAVRLRSNGKKPYLV
PIGGSNAIGALGYVRAGLELAEQIKDTGLQFSAVVLASGSAGTHSGLALALSEALPQLPVIGVTVSRSEEDQRPKVQGLA
ERTADLLGVALPDSFKVELWDEYFGPRYGEPNAGTLSAVKLLASQDAVLLDPVYTGKAMAGLLDGIGRGRFDDGPIIFLH
TGGAPALFAYKDFL

Sequences:

>Translated_334_residues
MSTQPIKQQLQRFNRLDLLGQPTPLEKLERLSTWLGRDVYIKRDDLTPLAMGGNKLRKLEYLAADAIAQGADTLITAGAL
QSNHVRQTAALAAKLGLGCVALLENPLGTDDSNYTGNGNRLLLDLFDTKVELVDNLDNADEQLAALAVRLRSNGKKPYLV
PIGGSNAIGALGYVRAGLELAEQIKDTGLQFSAVVLASGSAGTHSGLALALSEALPQLPVIGVTVSRSEEDQRPKVQGLA
ERTADLLGVALPDSFKVELWDEYFGPRYGEPNAGTLSAVKLLASQDAVLLDPVYTGKAMAGLLDGIGRGRFDDGPIIFLH
TGGAPALFAYKDFL
>Mature_333_residues
STQPIKQQLQRFNRLDLLGQPTPLEKLERLSTWLGRDVYIKRDDLTPLAMGGNKLRKLEYLAADAIAQGADTLITAGALQ
SNHVRQTAALAAKLGLGCVALLENPLGTDDSNYTGNGNRLLLDLFDTKVELVDNLDNADEQLAALAVRLRSNGKKPYLVP
IGGSNAIGALGYVRAGLELAEQIKDTGLQFSAVVLASGSAGTHSGLALALSEALPQLPVIGVTVSRSEEDQRPKVQGLAE
RTADLLGVALPDSFKVELWDEYFGPRYGEPNAGTLSAVKLLASQDAVLLDPVYTGKAMAGLLDGIGRGRFDDGPIIFLHT
GGAPALFAYKDFL

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=325, Percent_Identity=61.8461538461539, Blast_Score=402, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 35560; Mature: 35429

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQPIKQQLQRFNRLDLLGQPTPLEKLERLSTWLGRDVYIKRDDLTPLAMGGNKLRKLE
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEECCCCHHHHHH
YLAADAIAQGADTLITAGALQSNHVRQTAALAAKLGLGCVALLENPLGTDDSNYTGNGNR
HHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCE
LLLDLFDTKVELVDNLDNADEQLAALAVRLRSNGKKPYLVPIGGSNAIGALGYVRAGLEL
EEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH
AEQIKDTGLQFSAVVLASGSAGTHSGLALALSEALPQLPVIGVTVSRSEEDQRPKVQGLA
HHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH
ERTADLLGVALPDSFKVELWDEYFGPRYGEPNAGTLSAVKLLASQDAVLLDPVYTGKAMA
HHHHHHHEEECCCCCEEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHH
GLLDGIGRGRFDDGPIIFLHTGGAPALFAYKDFL
HHHHHHCCCCCCCCCEEEEECCCCCEEHHHHHCC
>Mature Secondary Structure 
STQPIKQQLQRFNRLDLLGQPTPLEKLERLSTWLGRDVYIKRDDLTPLAMGGNKLRKLE
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEECCCCHHHHHH
YLAADAIAQGADTLITAGALQSNHVRQTAALAAKLGLGCVALLENPLGTDDSNYTGNGNR
HHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCE
LLLDLFDTKVELVDNLDNADEQLAALAVRLRSNGKKPYLVPIGGSNAIGALGYVRAGLEL
EEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH
AEQIKDTGLQFSAVVLASGSAGTHSGLALALSEALPQLPVIGVTVSRSEEDQRPKVQGLA
HHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH
ERTADLLGVALPDSFKVELWDEYFGPRYGEPNAGTLSAVKLLASQDAVLLDPVYTGKAMA
HHHHHHHEEECCCCCEEEEEHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCHHHH
GLLDGIGRGRFDDGPIIFLHTGGAPALFAYKDFL
HHHHHHCCCCCCCCCEEEEECCCCCEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA