| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is glnP [H]
Identifier: 77456454
GI number: 77456454
Start: 266595
End: 267224
Strand: Direct
Name: glnP [H]
Synonym: Pfl01_0226
Alternate gene names: 77456454
Gene position: 266595-267224 (Clockwise)
Preceding gene: 77456453
Following gene: 77456455
Centisome position: 4.14
GC content: 63.33
Gene sequence:
>630_bases GTGTCGTTGCCGCAATTGGCCAAAGGCGCCGGGCAAACCCTGTCGATCTCGTTCCTCAGTATCGCCATCAGCACCGTCGG CGGCGTGCTCTACGGCGTGCTGCGCACACTCAACGTACGGTGGCTGAACGCGCTGCTGCGGATCTATCTGGAGCTGTTCC GGGCGATCCCGGTGCTGGTCTGGTTATACCTGCTGTTTTTCGGCCTGCCGATTTTCTTCGGCCTGAGCCTGCCGAGCTTC TGGTGCGCGGTGCTGGTGCTGTCGCTGTGGGGCGCCAGCGAGGTCGGCGAAGTGGCGCGCGGTGCGTTGCATTCGTTGCC GCGCGGGCAGCGTGAGGCGGGGTTGTCGATCGGCCTGAACGCGGCGCAGCTCTACGGCTACGTGCTGTTGCCCCAGGCGC TGAAACGCATGACGCCGCCGACCATCAACGTCTACACGCGGATCATCAAGACCAGTTCCCTGGCGGTGCTGATCGGCGTC GTCGATGTGATCAAGGTCGGCCAGCAGATCATCGAACGCACCTACGAATCGGTGCTGATCTACGGCGCGCTGTTCCTGTT TTTCTTTTTCATCTGCTACCCGCTGTCGGCCGCTTCGCGCGTGCTGGAGCGGCGCTGGACGCAAGCATGA
Upstream 100 bases:
>100_bases ACGCTGATCTGCGTGCTGCTGTTCCTGCCGCTGTCGCTGCTGTTGAGCCGTCTGGAAAGGAGGCTCCAGCATGGCCAGTT CGGGTCTTGAACTGCTCTGG
Downstream 100 bases:
>100_bases GCGCATTGATCGAGTTTCAGGGCTTCAACAAATTCTTCGGTGAACAGCAGGTGCTCAAGGGCATCGACCTGCAAGTGAAA TCCGGCGAAGTCATCGTCGT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSLPQLAKGAGQTLSISFLSIAISTVGGVLYGVLRTLNVRWLNALLRIYLELFRAIPVLVWLYLLFFGLPIFFGLSLPSF WCAVLVLSLWGASEVGEVARGALHSLPRGQREAGLSIGLNAAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGV VDVIKVGQQIIERTYESVLIYGALFLFFFFICYPLSAASRVLERRWTQA
Sequences:
>Translated_209_residues MSLPQLAKGAGQTLSISFLSIAISTVGGVLYGVLRTLNVRWLNALLRIYLELFRAIPVLVWLYLLFFGLPIFFGLSLPSF WCAVLVLSLWGASEVGEVARGALHSLPRGQREAGLSIGLNAAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGV VDVIKVGQQIIERTYESVLIYGALFLFFFFICYPLSAASRVLERRWTQA >Mature_208_residues SLPQLAKGAGQTLSISFLSIAISTVGGVLYGVLRTLNVRWLNALLRIYLELFRAIPVLVWLYLLFFGLPIFFGLSLPSFW CAVLVLSLWGASEVGEVARGALHSLPRGQREAGLSIGLNAAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVV DVIKVGQQIIERTYESVLIYGALFLFFFFICYPLSAASRVLERRWTQA
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=36.5853658536585, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=33.4883720930233, Blast_Score=101, Evalue=3e-23, Organism=Escherichia coli, GI1786874, Length=205, Percent_Identity=30.2439024390244, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI87082239, Length=205, Percent_Identity=31.219512195122, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=28.3018867924528, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788645, Length=209, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1786873, Length=213, Percent_Identity=29.1079812206573, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=23.4741784037559, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI48994930, Length=130, Percent_Identity=27.6923076923077, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23141; Mature: 23010
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPQLAKGAGQTLSISFLSIAISTVGGVLYGVLRTLNVRWLNALLRIYLELFRAIPVLV CCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLYLLFFGLPIFFGLSLPSFWCAVLVLSLWGASEVGEVARGALHSLPRGQREAGLSIGLN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCHHCCH AAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVLI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGALFLFFFFICYPLSAASRVLERRWTQA HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLPQLAKGAGQTLSISFLSIAISTVGGVLYGVLRTLNVRWLNALLRIYLELFRAIPVLV CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLYLLFFGLPIFFGLSLPSFWCAVLVLSLWGASEVGEVARGALHSLPRGQREAGLSIGLN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCHHCCH AAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVLI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGALFLFFFFICYPLSAASRVLERRWTQA HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]