Click here to switch to the map view.

The map label for this gene is tonB2 [H]

Identifier: 77456446

GI number: 77456446

Start: 260723

End: 261580

Strand: Direct

Name: tonB2 [H]

Synonym: Pfl01_0218

Alternate gene names: 77456446

Gene position: 260723-261580 (Clockwise)

Preceding gene: 77456444

Following gene: 77456447

Centisome position: 4.05

GC content: 66.43

Gene sequence:

>858_bases
ATGACGCTTCGGGCTTTTCGCAAAGAGACCGCAGGGAGTAAATCAATGGGCAATGTCCAGACCGCCGCCAGCGCACAGGA
GGTGCTGTGGCGCCAGGCGCCGAGCGGCGAGTTGGTCGATCTCGGCCGGCCCCATCGCGTGCCGTTGGGGCAGCTGCGTT
TGCAGCGCGCCCCCAAGGGCATTTTGAGCCGCCGCGAAACGATTCTGCTCGGCGTTCTGGCGCTGGTGGTGCATGGCGCG
GTGATCTACTGGATCAACCAGCATCCGACGCCGGCGCTGCCGATCGTGCCGCCGGAAATTCCACCGATGACCATCGAGTT
TTCTCGCCCGGCGCCACCGGCACCACCTGTAGTTGTGCCGCCGCCACCGGCACCTGTGGTTGAGCCTCCGCCCCCGGTGG
AGGACGAACTGGCAACCAAGCCGCCACCGAAACCAAAGCCGATTCCAAAACCGAAACCGGTCGCCAAACCCGTACCGAAA
CCGGCGCCAAAAGCGGTCGAGCAACCACCGGCTCCGCCACAACCGGCCGCCCCGGTCGCCGCGCCCGCGCCACCTGCACC
ACCGGCACCTGCGCCGGTGACGCCGGCCTCGGCCAACGCGGCGTACCTGAAGAACCCGGCGCCGGAGTATCCGTCGCTGG
CCCAGCGTCGCGGTTGGGAAGGCACGGTGTTGCTCCGGGTGCACGTTCTGGCCAGCGGCAAACCGGGCGAAATCCAGATT
CAGAAAAGCAGTGGCCGGCAACAGCTCGACGACGCGGCGCTGGACGCTGTGAAGCGCTGGAGCTTCGTGCCGGCCAAGCA
GGGTGATGTCGCCCAGGACGGCTGGGTCAGCGTGCCCATCGATTTCAAGATTCATTAA

Upstream 100 bases:

>100_bases
ATTCTTTTTGGTTATATACTTTGTCATAAAAAATACTTTAAGAAATAAGTGTCTGTATCAATGATTCACCAACTGAAACG
TTGTGCGGGGGATGTCAGGC

Downstream 100 bases:

>100_bases
ACCGAAACCAATTTCGCGCTAAACGTTTACACGAGGGAACACATCATGACGTTACTGGCATCTCCACTGGAATCCATCGA
AAGCGCGGTGATCTGGCTGC

Product: TonB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTLRAFRKETAGSKSMGNVQTAASAQEVLWRQAPSGELVDLGRPHRVPLGQLRLQRAPKGILSRRETILLGVLALVVHGA
VIYWINQHPTPALPIVPPEIPPMTIEFSRPAPPAPPVVVPPPPAPVVEPPPPVEDELATKPPPKPKPIPKPKPVAKPVPK
PAPKAVEQPPAPPQPAAPVAAPAPPAPPAPAPVTPASANAAYLKNPAPEYPSLAQRRGWEGTVLLRVHVLASGKPGEIQI
QKSSGRQQLDDAALDAVKRWSFVPAKQGDVAQDGWVSVPIDFKIH

Sequences:

>Translated_285_residues
MTLRAFRKETAGSKSMGNVQTAASAQEVLWRQAPSGELVDLGRPHRVPLGQLRLQRAPKGILSRRETILLGVLALVVHGA
VIYWINQHPTPALPIVPPEIPPMTIEFSRPAPPAPPVVVPPPPAPVVEPPPPVEDELATKPPPKPKPIPKPKPVAKPVPK
PAPKAVEQPPAPPQPAAPVAAPAPPAPPAPAPVTPASANAAYLKNPAPEYPSLAQRRGWEGTVLLRVHVLASGKPGEIQI
QKSSGRQQLDDAALDAVKRWSFVPAKQGDVAQDGWVSVPIDFKIH
>Mature_284_residues
TLRAFRKETAGSKSMGNVQTAASAQEVLWRQAPSGELVDLGRPHRVPLGQLRLQRAPKGILSRRETILLGVLALVVHGAV
IYWINQHPTPALPIVPPEIPPMTIEFSRPAPPAPPVVVPPPPAPVVEPPPPVEDELATKPPPKPKPIPKPKPVAKPVPKP
APKAVEQPPAPPQPAAPVAAPAPPAPPAPAPVTPASANAAYLKNPAPEYPSLAQRRGWEGTVLLRVHVLASGKPGEIQIQ
KSSGRQQLDDAALDAVKRWSFVPAKQGDVAQDGWVSVPIDFKIH

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 30250; Mature: 30119

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRAFRKETAGSKSMGNVQTAASAQEVLWRQAPSGELVDLGRPHRVPLGQLRLQRAPKG
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHCCHH
ILSRRETILLGVLALVVHGAVIYWINQHPTPALPIVPPEIPPMTIEFSRPAPPAPPVVVP
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEC
PPPAPVVEPPPPVEDELATKPPPKPKPIPKPKPVAKPVPKPAPKAVEQPPAPPQPAAPVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
APAPPAPPAPAPVTPASANAAYLKNPAPEYPSLAQRRGWEGTVLLRVHVLASGKPGEIQI
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCEEEE
QKSSGRQQLDDAALDAVKRWSFVPAKQGDVAQDGWVSVPIDFKIH
ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
TLRAFRKETAGSKSMGNVQTAASAQEVLWRQAPSGELVDLGRPHRVPLGQLRLQRAPKG
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHCCHH
ILSRRETILLGVLALVVHGAVIYWINQHPTPALPIVPPEIPPMTIEFSRPAPPAPPVVVP
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEC
PPPAPVVEPPPPVEDELATKPPPKPKPIPKPKPVAKPVPKPAPKAVEQPPAPPQPAAPVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
APAPPAPPAPAPVTPASANAAYLKNPAPEYPSLAQRRGWEGTVLLRVHVLASGKPGEIQI
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCCCEEEE
QKSSGRQQLDDAALDAVKRWSFVPAKQGDVAQDGWVSVPIDFKIH
ECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]