| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456353
Identifier: 77456353
GI number: 77456353
Start: 134574
End: 135041
Strand: Reverse
Name: 77456353
Synonym: Pfl01_0125
Alternate gene names: NA
Gene position: 135041-134574 (Counterclockwise)
Preceding gene: 77456354
Following gene: 77456351
Centisome position: 2.1
GC content: 60.9
Gene sequence:
>468_bases ATGAGCAATCTGCAACCCGACACCCTGATCAAAAACCCTCACGGCTGCCACGTCGTGTCTTCGGTGGAAGTGCCGGTGGA CGCCAGGCAAGTGTGGGCAGTGGTCGGTAAATTCGACGGTTTCGACCGTTTCATTCCGGCGCTGTCGCACATCGAAATGA CCGGCGAAGGCGTGTCTTCGCTGCGCAAGAAGTTCTTCAAGGATGGCAACGTCGTGGTCGAGCAACTCAACTCCCGGGAC GACCAGGCGCTGAGCATGACCTGGACCACCATCTACAACACCCTGGGCGTGGCCAATCTGTGGGCGGCGATGAATGTGGA GTCGCTGGGCGCGGGCAAGTCCCGGGCGACCTGGACGATCATTGCCGAGCCGGCCAGCGGTGGGCCCGAGGCGCTGCCGG GGTTCAAGGATTTCGTGCAGGGGTTTGCCGATGACGCGATGGGCAATGTGCTGAAGCTGTTTGTGTAA
Upstream 100 bases:
>100_bases GCGCGCACTACCCGGAAAAATCCCCGGCGCTGCTGCGTCGCGGCTGCGACTACCTGAAAGAAATCAACTTCATCTGACTC ATCAACCAAGGAGCAACACC
Downstream 100 bases:
>100_bases GGCATGAAAAAGCCCGCTGCGGATCACTCCGCAGCGGGCTGTTTTTTACCGCAAGCGATCAGATCTTGAAGCTGTCGACC AGCTGTTTCAAACGGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSNLQPDTLIKNPHGCHVVSSVEVPVDARQVWAVVGKFDGFDRFIPALSHIEMTGEGVSSLRKKFFKDGNVVVEQLNSRD DQALSMTWTTIYNTLGVANLWAAMNVESLGAGKSRATWTIIAEPASGGPEALPGFKDFVQGFADDAMGNVLKLFV
Sequences:
>Translated_155_residues MSNLQPDTLIKNPHGCHVVSSVEVPVDARQVWAVVGKFDGFDRFIPALSHIEMTGEGVSSLRKKFFKDGNVVVEQLNSRD DQALSMTWTTIYNTLGVANLWAAMNVESLGAGKSRATWTIIAEPASGGPEALPGFKDFVQGFADDAMGNVLKLFV >Mature_154_residues SNLQPDTLIKNPHGCHVVSSVEVPVDARQVWAVVGKFDGFDRFIPALSHIEMTGEGVSSLRKKFFKDGNVVVEQLNSRDD QALSMTWTTIYNTLGVANLWAAMNVESLGAGKSRATWTIIAEPASGGPEALPGFKDFVQGFADDAMGNVLKLFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16798; Mature: 16667
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLQPDTLIKNPHGCHVVSSVEVPVDARQVWAVVGKFDGFDRFIPALSHIEMTGEGVSS CCCCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH LRKKFFKDGNVVVEQLNSRDDQALSMTWTTIYNTLGVANLWAAMNVESLGAGKSRATWTI HHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCEEEE IAEPASGGPEALPGFKDFVQGFADDAMGNVLKLFV EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNLQPDTLIKNPHGCHVVSSVEVPVDARQVWAVVGKFDGFDRFIPALSHIEMTGEGVSS CCCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH LRKKFFKDGNVVVEQLNSRDDQALSMTWTTIYNTLGVANLWAAMNVESLGAGKSRATWTI HHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCEEEE IAEPASGGPEALPGFKDFVQGFADDAMGNVLKLFV EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA