| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456279
Identifier: 77456279
GI number: 77456279
Start: 57242
End: 58120
Strand: Reverse
Name: 77456279
Synonym: Pfl01_0051
Alternate gene names: NA
Gene position: 58120-57242 (Counterclockwise)
Preceding gene: 77456280
Following gene: 77456278
Centisome position: 0.9
GC content: 63.37
Gene sequence:
>879_bases ATGCGCCGCTGGGGAACCGAACGCGTCGTTGGCCTGCATGAACCGCAGGTCAACGAGCATCACCTGGAGTCGACGGGCCT GCCCGCAGACAGCCGTCTGCGCTTGCTCAGCTTCAATATTCAGGTCGGCATCAGCACCGAGCGCTATCGGCACTACCTGA CCCGCAGCTGGCAGCATCTGCTGCCGCACCCCGGGCGTTCGAGCAATCTGCAAAAGATCGGCAATCTGCTTGGCGACTTC GATCTGGTCGCCCTGCAGGAAGCCGATGGCGGCAGCCTGCGTTCAGGTTACGTCAATCAGGTCGAACACCTGGCCCAGCT CGGTGCCTTCCCCTACTGGTATCAACAACTCAATCGCAACCTTGGCCGACTGGCCCAGCACAGCAATGGCGTGCTCAGTC GCCTGCGGCCGTGGGCGATCGAAGACCACCCGCTGCCGGGTCCGAAGGGACGCGGGGCGATTCTGGTGCGTTTTGGCGAA GGCCCTGAAGCGCTGGTGGTAGTGATGATGCACCTGGCGCTCGGCGCCCGGGTCCGCAGCATGCAACTGGCCTATATCCG CGAGCTGATCGGCGGCTACAAGCATCAGGTGCTGATGGGCGACATGAACACCCACGCCAGCGATCTGCTGCAACATTCAC CGTTGCGCGACCTCGGCCTGCTGGCCCCGCAACTCGAAGCGACATTCCCCAGCTGGCGCCCGCAGCGCTGCCTGGACCAT ATTCTGCTCAGCCCGACCCTGACCCTGGAAAAGGTCGAAGTGCTGGCACAACCGATTTCCGATCACCTGCCGGTCGCGGT AGAGATTCGTCTGCCGGGTTCGCTCACGGCCGATGCATTGCCCGCGTTGAGCACTGCCCTTCGCGGAACCCCTGAATGA
Upstream 100 bases:
>100_bases CTGCCGGCGGTGCCGAACAGGCGCTGAAACTGGCTGACCAACTGGTGGCCAAAGAGCGAGCGACCAACAAGGCAGCCGCC AACTAAGCGCGGCAATCGCC
Downstream 100 bases:
>100_bases GCGACGAAGCCCAGCGCTGGAAAGAGAAATACCTCAAAAGCATCGAACAACAGGAAAAGCTCGAACGTCGATGGGACGCC CGGCTCGACCTGCTGCGCCG
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Metal-Dependent Hydrolase
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MRRWGTERVVGLHEPQVNEHHLESTGLPADSRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHPGRSSNLQKIGNLLGDF DLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLRPWAIEDHPLPGPKGRGAILVRFGE GPEALVVVMMHLALGARVRSMQLAYIRELIGGYKHQVLMGDMNTHASDLLQHSPLRDLGLLAPQLEATFPSWRPQRCLDH ILLSPTLTLEKVEVLAQPISDHLPVAVEIRLPGSLTADALPALSTALRGTPE
Sequences:
>Translated_292_residues MRRWGTERVVGLHEPQVNEHHLESTGLPADSRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHPGRSSNLQKIGNLLGDF DLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLRPWAIEDHPLPGPKGRGAILVRFGE GPEALVVVMMHLALGARVRSMQLAYIRELIGGYKHQVLMGDMNTHASDLLQHSPLRDLGLLAPQLEATFPSWRPQRCLDH ILLSPTLTLEKVEVLAQPISDHLPVAVEIRLPGSLTADALPALSTALRGTPE >Mature_292_residues MRRWGTERVVGLHEPQVNEHHLESTGLPADSRLRLLSFNIQVGISTERYRHYLTRSWQHLLPHPGRSSNLQKIGNLLGDF DLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRLAQHSNGVLSRLRPWAIEDHPLPGPKGRGAILVRFGE GPEALVVVMMHLALGARVRSMQLAYIRELIGGYKHQVLMGDMNTHASDLLQHSPLRDLGLLAPQLEATFPSWRPQRCLDH ILLSPTLTLEKVEVLAQPISDHLPVAVEIRLPGSLTADALPALSTALRGTPE
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32534; Mature: 32534
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWGTERVVGLHEPQVNEHHLESTGLPADSRLRLLSFNIQVGISTERYRHYLTRSWQHL CCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHH LPHPGRSSNLQKIGNLLGDFDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRN CCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH LGRLAQHSNGVLSRLRPWAIEDHPLPGPKGRGAILVRFGEGPEALVVVMMHLALGARVRS HHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH MQLAYIRELIGGYKHQVLMGDMNTHASDLLQHSPLRDLGLLAPQLEATFPSWRPQRCLDH HHHHHHHHHHCCHHHEEEECCCCCHHHHHHHCCCCHHHHHCCCHHHHCCCCCCHHHHHHH ILLSPTLTLEKVEVLAQPISDHLPVAVEIRLPGSLTADALPALSTALRGTPE HHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MRRWGTERVVGLHEPQVNEHHLESTGLPADSRLRLLSFNIQVGISTERYRHYLTRSWQHL CCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHH LPHPGRSSNLQKIGNLLGDFDLVALQEADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRN CCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH LGRLAQHSNGVLSRLRPWAIEDHPLPGPKGRGAILVRFGEGPEALVVVMMHLALGARVRS HHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH MQLAYIRELIGGYKHQVLMGDMNTHASDLLQHSPLRDLGLLAPQLEATFPSWRPQRCLDH HHHHHHHHHHCCHHHEEEECCCCCHHHHHHHCCCCHHHHHCCCHHHHCCCCCCHHHHHHH ILLSPTLTLEKVEVLAQPISDHLPVAVEIRLPGSLTADALPALSTALRGTPE HHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA