Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77456256

Identifier: 77456256

GI number: 77456256

Start: 31102

End: 31761

Strand: Reverse

Name: 77456256

Synonym: Pfl01_0028

Alternate gene names: NA

Gene position: 31761-31102 (Counterclockwise)

Preceding gene: 77456258

Following gene: 77456254

Centisome position: 0.49

GC content: 63.48

Gene sequence:

>660_bases
ATGAAAAATGCCGAAACCCCGGCGGTGAAAGTGGTGCTCTATGGTGCCATGAGTAGCCTGGGCAGTGCGTTGATGGCTGA
ACTGCTGCGTCGCCAGCACGAAGTCATTGCCATCCTCGACGATCTGACGGCGCTCGCCCCACGGCCGGGGCTGCGCACCA
AAAGCGGCGATCTGCTCGATGCCGAGCGGGTCAACCAGAGTGTCGCCGGCAGCTCGGCAGTGATCTGCCTGCTCAATGCG
CCGGGCTTGCCGCTGAGCAGCGATCATGTCGAGAAATCCGTGGTGTTGGGGCCTGTGGAACAGGTGCTGGCGGTGGATGC
GCTGATCGACGGACTGCAGGCGGCGAACGTCTCGCGGCTGTTTGTCATCGGCGAATTCGAAGCCCTGGACGATCCGGAAA
ACGCCGACCCGTTGCAACGCCACGCCGCTCAAGAGGTTCGCGAAGCCCTGCAAAGCAGCCCGCTGCACTGGACGCTGGTG
AATGCACCGCGCAGCGTGGCCGGGCTGACGATCGAGCATTTCAGTCAGGTCGGCCGCACGCTTGAACCGGGTCTGGCCGA
ACCGCTGGAGCGCCTGAACCGGGTGGCGGTGGGCATTGCCGATGAGCTGCGGCTGAATTTGCATCTGCGCCAGCACGTGG
ATTTTGTCGCCGCTTCTTGA

Upstream 100 bases:

>100_bases
CCTTGATCGTCTGCATCGCAAACCCTCTGAATCGGTTCGAACCCTCGCCGTTGACCGTATGTCACACGCCATACAAGGGA
AAACAAAAGGGAACTCAGCC

Downstream 100 bases:

>100_bases
TCCGTTACACAGCAATCGACGGCAACGGTAGCCCGGCCAGGGATTCGGCGCTGCTCGCCTGTTCGGCCATCAGCCAATCC
ACGAACGTCTGGATCAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKNAETPAVKVVLYGAMSSLGSALMAELLRRQHEVIAILDDLTALAPRPGLRTKSGDLLDAERVNQSVAGSSAVICLLNA
PGLPLSSDHVEKSVVLGPVEQVLAVDALIDGLQAANVSRLFVIGEFEALDDPENADPLQRHAAQEVREALQSSPLHWTLV
NAPRSVAGLTIEHFSQVGRTLEPGLAEPLERLNRVAVGIADELRLNLHLRQHVDFVAAS

Sequences:

>Translated_219_residues
MKNAETPAVKVVLYGAMSSLGSALMAELLRRQHEVIAILDDLTALAPRPGLRTKSGDLLDAERVNQSVAGSSAVICLLNA
PGLPLSSDHVEKSVVLGPVEQVLAVDALIDGLQAANVSRLFVIGEFEALDDPENADPLQRHAAQEVREALQSSPLHWTLV
NAPRSVAGLTIEHFSQVGRTLEPGLAEPLERLNRVAVGIADELRLNLHLRQHVDFVAAS
>Mature_219_residues
MKNAETPAVKVVLYGAMSSLGSALMAELLRRQHEVIAILDDLTALAPRPGLRTKSGDLLDAERVNQSVAGSSAVICLLNA
PGLPLSSDHVEKSVVLGPVEQVLAVDALIDGLQAANVSRLFVIGEFEALDDPENADPLQRHAAQEVREALQSSPLHWTLV
NAPRSVAGLTIEHFSQVGRTLEPGLAEPLERLNRVAVGIADELRLNLHLRQHVDFVAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23442; Mature: 23442

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNAETPAVKVVLYGAMSSLGSALMAELLRRQHEVIAILDDLTALAPRPGLRTKSGDLLD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AERVNQSVAGSSAVICLLNAPGLPLSSDHVEKSVVLGPVEQVLAVDALIDGLQAANVSRL
HHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
FVIGEFEALDDPENADPLQRHAAQEVREALQSSPLHWTLVNAPRSVAGLTIEHFSQVGRT
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCC
LEPGLAEPLERLNRVAVGIADELRLNLHLRQHVDFVAAS
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNAETPAVKVVLYGAMSSLGSALMAELLRRQHEVIAILDDLTALAPRPGLRTKSGDLLD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AERVNQSVAGSSAVICLLNAPGLPLSSDHVEKSVVLGPVEQVLAVDALIDGLQAANVSRL
HHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
FVIGEFEALDDPENADPLQRHAAQEVREALQSSPLHWTLVNAPRSVAGLTIEHFSQVGRT
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCC
LEPGLAEPLERLNRVAVGIADELRLNLHLRQHVDFVAAS
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA