| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is dnaK [H]
Identifier: 76819769
GI number: 76819769
Start: 71798
End: 73645
Strand: Direct
Name: dnaK [H]
Synonym: BURPS1710b_A0045
Alternate gene names: 76819769
Gene position: 71798-73645 (Clockwise)
Preceding gene: 76818106
Following gene: 76818939
Centisome position: 2.26
GC content: 72.94
Gene sequence:
>1848_bases ATGAGCGACGCGCGTTATTCGATCGGCATCGATCTGGGCACCACCCACTGCGCGCTGTCGTACGTGGATCTCGCGGCGAG CGACGGCGAGAAGACGAGCCTTCGCGTGCTGCCGATCGCGCAGCTCACCGCGCCGGGCGCAATCGACGCGCCGAATCTGC TGCCGTCGTTTCTCTATCTGCCGCATCCGAGCGAGCTCGCGCCGGGCGAGCTTGCGCTGCCGTGGGCGGCCGAGCGCGAC TTCGCGGTCGGCGAGCTCGCGCGCAGCCGCGGCGCGGGCACGCCGATCCGCCTCGTGTCGAGCGCGAAGAGCTGGCTGTG CCATCCGGGCGTCGATCGCCGCGCCGGCATCCTGCCGAGCGACGCGCCGCCGGAAGTCGCGCGCGTGTCGCCGCTCGACG CGTCGGTGCGCTATCTGTCCCATTTGCGCGAGGCGTGGAACCACGCGCATCCGGACGCGCCGTTCGATCGGCAGGACGTC ACCGTCACGATTCCCGCGTCGTTCGATCCGGCCGCGCGCGAGCTGACGGCCGAGGCCGCGCAGGCGGCCGGCTACGCGCA TATGACGCTGCTCGAGGAGCCGCAGGCGGCGCTCTACAGCTGGATCGAGAAAAGCGGCGGCGCGTGGCGCAAGGACGTCC GGGTCGGCGACATCATCCTCGTCGTCGACGTCGGCGGCGGCACGACCGACCTGTCGCTGATCGCGGTCGTCGAGCGCGAC GGCAACCTCGAGCTGCATCGCATCGCGGTCGGCGAGCATATCCTGCTCGGCGGCGACAACATGGATCTCGCGCTCGCGCA CGTGGTCGCGCGCAAGCTCGCCGCGCAAGGCACGCAGGCCGACCCCTGGCAATTGCGCGCGCTCACCTACGCGTGCCGCG GCGCGAAGGAGACGCTGCTCGGCGATCCGTCGGCGCAGGCCGTGCCGCTCGTCGTGCCGAGCCGCGGCGCGAAGCTGATC GGCGGCTCGATCCGCACCGAGCTCACGCGCGCCGAGCTGACGCAGACGATCCTCGAAGGCTTCTTCCCGGCCGTCGACGC GTCGGCGCGGCCGGTGAGCCGCACGCGCGCGGGCCTCATGCAGCTCGGCCTGCCGTACGCGCAGGACGCCGGCATCACGC GCCATCTCGCCGCGTTCCTCGGCCGGCAGGCCGGAGCGCTCGCGGAGCTCGACGGGCTGCGGCACGCGCATGACGCGTCG GCGAGCTTCCTGCATCCGAGCGCGGTGCTCTTCAACGGCGGCGTGTTCAAGTCGCCGCTGCTCGTCGAGCGCATGCTCGA CACGCTCAACGGCTGGCTCGCGGCCGAGGGCGCGGCGCCCGCGCGTCTGCTCGGCGGCGCCGATCTCGATCTCGCGGTCG CGCGCGGCGCGGCCTACTACGGCTACGTGAAGCGCGGCCGCGGCGTGCGCATTCGCGGCGGCACGGCGCGCGCGTATTAC ATCGCGGTCGAATCGGCGATGCCGGCCGTGCCCGGCCTCGAGCCGCCGATCCAGGCGCTGTGCGTCGCGCCGTTCGGGAT GGAGGAAGGCACCGACGCCGCGCTGCCGCCGCAGGAGTTCGGCCTCGTCGTCGGCGAGCCCGTCCGCTTCCGCTTCTTCG GTTCGTCGGTGCGCCGGCAGGACCAGGTCGGCACGCTGCTCGACTTCTGGTCGCCCGACGAGCTGCAGGAGCTCGACGCG ATCGAGGCGACGCTGCCGACCGCGGGCCGCACGCCGGGCGAGGTCGTGCCGGTGAGGCTGCACGCGCGCGTGACGGAGGC CGGCACGCTCGAGCTCGAAGCCGTGCAAGGCGGCACGCACGAGCGCTGGAAGGTGGAGTTCGACGTGCGCGGCGGCGCGA ACGCGTAA
Upstream 100 bases:
>100_bases GCAGCATCAGCCATCGCGGCTGGCGCGTCGACGCCGTCCGGCTGCCGAAGCTGAACCCGGGCCACGACGCGTCGATCATC GCCCCGGCCGAGGTGGCGCT
Downstream 100 bases:
>100_bases CCGATGAAACGATTCATCGTCGGCATCGATCTCGGGACGAGCAATACCGTCGTGGCGTACGTCGAGGCGGGCGGCGACGC GATCCGCGTGTTCGACGTCG
Product: heat shock protein 70
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MSDARYSIGIDLGTTHCALSYVDLAASDGEKTSLRVLPIAQLTAPGAIDAPNLLPSFLYLPHPSELAPGELALPWAAERD FAVGELARSRGAGTPIRLVSSAKSWLCHPGVDRRAGILPSDAPPEVARVSPLDASVRYLSHLREAWNHAHPDAPFDRQDV TVTIPASFDPAARELTAEAAQAAGYAHMTLLEEPQAALYSWIEKSGGAWRKDVRVGDIILVVDVGGGTTDLSLIAVVERD GNLELHRIAVGEHILLGGDNMDLALAHVVARKLAAQGTQADPWQLRALTYACRGAKETLLGDPSAQAVPLVVPSRGAKLI GGSIRTELTRAELTQTILEGFFPAVDASARPVSRTRAGLMQLGLPYAQDAGITRHLAAFLGRQAGALAELDGLRHAHDAS ASFLHPSAVLFNGGVFKSPLLVERMLDTLNGWLAAEGAAPARLLGGADLDLAVARGAAYYGYVKRGRGVRIRGGTARAYY IAVESAMPAVPGLEPPIQALCVAPFGMEEGTDAALPPQEFGLVVGEPVRFRFFGSSVRRQDQVGTLLDFWSPDELQELDA IEATLPTAGRTPGEVVPVRLHARVTEAGTLELEAVQGGTHERWKVEFDVRGGANA
Sequences:
>Translated_615_residues MSDARYSIGIDLGTTHCALSYVDLAASDGEKTSLRVLPIAQLTAPGAIDAPNLLPSFLYLPHPSELAPGELALPWAAERD FAVGELARSRGAGTPIRLVSSAKSWLCHPGVDRRAGILPSDAPPEVARVSPLDASVRYLSHLREAWNHAHPDAPFDRQDV TVTIPASFDPAARELTAEAAQAAGYAHMTLLEEPQAALYSWIEKSGGAWRKDVRVGDIILVVDVGGGTTDLSLIAVVERD GNLELHRIAVGEHILLGGDNMDLALAHVVARKLAAQGTQADPWQLRALTYACRGAKETLLGDPSAQAVPLVVPSRGAKLI GGSIRTELTRAELTQTILEGFFPAVDASARPVSRTRAGLMQLGLPYAQDAGITRHLAAFLGRQAGALAELDGLRHAHDAS ASFLHPSAVLFNGGVFKSPLLVERMLDTLNGWLAAEGAAPARLLGGADLDLAVARGAAYYGYVKRGRGVRIRGGTARAYY IAVESAMPAVPGLEPPIQALCVAPFGMEEGTDAALPPQEFGLVVGEPVRFRFFGSSVRRQDQVGTLLDFWSPDELQELDA IEATLPTAGRTPGEVVPVRLHARVTEAGTLELEAVQGGTHERWKVEFDVRGGANA >Mature_614_residues SDARYSIGIDLGTTHCALSYVDLAASDGEKTSLRVLPIAQLTAPGAIDAPNLLPSFLYLPHPSELAPGELALPWAAERDF AVGELARSRGAGTPIRLVSSAKSWLCHPGVDRRAGILPSDAPPEVARVSPLDASVRYLSHLREAWNHAHPDAPFDRQDVT VTIPASFDPAARELTAEAAQAAGYAHMTLLEEPQAALYSWIEKSGGAWRKDVRVGDIILVVDVGGGTTDLSLIAVVERDG NLELHRIAVGEHILLGGDNMDLALAHVVARKLAAQGTQADPWQLRALTYACRGAKETLLGDPSAQAVPLVVPSRGAKLIG GSIRTELTRAELTQTILEGFFPAVDASARPVSRTRAGLMQLGLPYAQDAGITRHLAAFLGRQAGALAELDGLRHAHDASA SFLHPSAVLFNGGVFKSPLLVERMLDTLNGWLAAEGAAPARLLGGADLDLAVARGAAYYGYVKRGRGVRIRGGTARAYYI AVESAMPAVPGLEPPIQALCVAPFGMEEGTDAALPPQEFGLVVGEPVRFRFFGSSVRRQDQVGTLLDFWSPDELQELDAI EATLPTAGRTPGEVVPVRLHARVTEAGTLELEAVQGGTHERWKVEFDVRGGANA
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Escherichia coli, GI1786196, Length=408, Percent_Identity=24.7549019607843, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17541098, Length=202, Percent_Identity=29.2079207920792, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: 1300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 320 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 65294; Mature: 65163
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00297 HSP70_1 ; PS00329 HSP70_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDARYSIGIDLGTTHCALSYVDLAASDGEKTSLRVLPIAQLTAPGAIDAPNLLPSFLYL CCCCEEEEEEECCCHHHHHEEHEEECCCCCCCEEEEEEEHHCCCCCCCCCCHHHHHHEEC PHPSELAPGELALPWAAERDFAVGELARSRGAGTPIRLVSSAKSWLCHPGVDRRAGILPS CCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC DAPPEVARVSPLDASVRYLSHLREAWNHAHPDAPFDRQDVTVTIPASFDPAARELTAEAA CCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH QAAGYAHMTLLEEPQAALYSWIEKSGGAWRKDVRVGDIILVVDVGGGTTDLSLIAVVERD HHCCCEEEEECCCHHHHHHHHHHHCCCCEECCCEECCEEEEEECCCCCCCEEEEEEEECC GNLELHRIAVGEHILLGGDNMDLALAHVVARKLAAQGTQADPWQLRALTYACRGAKETLL CCEEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHC GDPSAQAVPLVVPSRGAKLIGGSIRTELTRAELTQTILEGFFPAVDASARPVSRTRAGLM CCCCCCEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH QLGLPYAQDAGITRHLAAFLGRQAGALAELDGLRHAHDASASFLHPSAVLFNGGVFKSPL HHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCHHHHCCCCCCCCCCEEEECCCCCCCHH LVERMLDTLNGWLAAEGAAPARLLGGADLDLAVARGAAYYGYVKRGRGVRIRGGTARAYY HHHHHHHHHCCEEEECCCCCHHHCCCCCCCHHHHCCCHHHHHHCCCCEEEEECCCCEEEE IAVESAMPAVPGLEPPIQALCVAPFGMEEGTDAALPPQEFGLVVGEPVRFRFFGSSVRRQ EEEECCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCHHHCCEEECCCEEEEEECCHHHHH DQVGTLLDFWSPDELQELDAIEATLPTAGRTPGEVVPVRLHARVTEAGTLELEAVQGGTH HHHCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCC ERWKVEFDVRGGANA CEEEEEEEECCCCCC >Mature Secondary Structure SDARYSIGIDLGTTHCALSYVDLAASDGEKTSLRVLPIAQLTAPGAIDAPNLLPSFLYL CCCEEEEEEECCCHHHHHEEHEEECCCCCCCEEEEEEEHHCCCCCCCCCCHHHHHHEEC PHPSELAPGELALPWAAERDFAVGELARSRGAGTPIRLVSSAKSWLCHPGVDRRAGILPS CCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC DAPPEVARVSPLDASVRYLSHLREAWNHAHPDAPFDRQDVTVTIPASFDPAARELTAEAA CCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH QAAGYAHMTLLEEPQAALYSWIEKSGGAWRKDVRVGDIILVVDVGGGTTDLSLIAVVERD HHCCCEEEEECCCHHHHHHHHHHHCCCCEECCCEECCEEEEEECCCCCCCEEEEEEEECC GNLELHRIAVGEHILLGGDNMDLALAHVVARKLAAQGTQADPWQLRALTYACRGAKETLL CCEEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHC GDPSAQAVPLVVPSRGAKLIGGSIRTELTRAELTQTILEGFFPAVDASARPVSRTRAGLM CCCCCCEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH QLGLPYAQDAGITRHLAAFLGRQAGALAELDGLRHAHDASASFLHPSAVLFNGGVFKSPL HHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCHHHHCCCCCCCCCCEEEECCCCCCCHH LVERMLDTLNGWLAAEGAAPARLLGGADLDLAVARGAAYYGYVKRGRGVRIRGGTARAYY HHHHHHHHHCCEEEECCCCCHHHCCCCCCCHHHHCCCHHHHHHCCCCEEEEECCCCEEEE IAVESAMPAVPGLEPPIQALCVAPFGMEEGTDAALPPQEFGLVVGEPVRFRFFGSSVRRQ EEEECCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCHHHCCEEECCCEEEEEECCHHHHH DQVGTLLDFWSPDELQELDAIEATLPTAGRTPGEVVPVRLHARVTEAGTLELEAVQGGTH HHHCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCC ERWKVEFDVRGGANA CEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]