Click here to switch to the map view.

The map label for this gene is dasR [H]

Identifier: 76819582

GI number: 76819582

Start: 498532

End: 499365

Strand: Direct

Name: dasR [H]

Synonym: BURPS1710b_A0349

Alternate gene names: 76819582

Gene position: 498532-499365 (Clockwise)

Preceding gene: 76819463

Following gene: 76817573

Centisome position: 15.67

GC content: 67.99

Gene sequence:

>834_bases
ATGCGGAATTACCCGTGCAGCCTGCCTGAATTGGGAAAGCACCATCGGGTTTGTCCCGATTCGCTCCGAACCACGTCATG
CAAACATATAGATGAATTTGGAGAAACCATGCACGCCACCGACGACCGTCTCCCCCGCTACCAGCGCCTGCGCGACGAAC
TGGCCGCGCTGATCGCGGCCCGGCACTGGCTGCCGGGCGAAGCGATCCCGACCGAGCAGGCGCTCGCGAAGCGCTATGAC
GTCGCGATCGGCACGGTGCGCAAGGCGGTCGATCTGCTCGTCGCCGACGGCATGCTCGAACGCTTCCAGGGGCGCGGCAC
GTTCGTGCGGCGCGCGAGCTTCGACAGCTCGCTGTTCCGTTTCTTCCGCTTCCAGGGTAGGCACGGCGAGCGCCGGATAC
CGGAGAGCCGGATCCTGCGCCGCGAGGTCGTCGAAGCGCCGTCCGCGGTGGCGGCCGCGCTGCAGATTCCGGCGCGCGCG
TCGGTGATCGAGATGACGCGGGTGCGCCTGATCGACGGCGCGCCGATGCTCGCCGAGGAAATCTGGCTGCCCTACGACCG
CTTCGCCGCATTCGCGCGGCTCGAGCTCGCTTCGATCGGCGATCTGCTGTATCCGGTCTACGAAGCGCATTGCAACCAGA
TCGTCGCCTCGGCCACCGAGACGCTGACCGTCGAGGCGATCGGCCCCGTGCACGCGCGGCTGCTGCGCATCGAGCCGGGC
ACGCCCGCCGTCGTGATCGAGCGGCTCGCGTACGGCTACGACCGCCGGCCGCTCGAATGGCGGCGCTCGCGCGGCCCCGC
GAGCGAATTCATCTATCAGGCGGAAATCCGCTAG

Upstream 100 bases:

>100_bases
TTCGCCATGACCGCCCGTTCGCGGATTGAGGTTTCGTCCACCAGCCGTCTCCTTGCTCGATAATTCATATAGATGATTAG
TTGATCAATTGAGTGAGACA

Downstream 100 bases:

>100_bases
CGGCCGGCTCGCGCGACAGCGGAGCTCGCGCACGGGCCGCGCGCTCGCGCGAGCAACGCATGGAGCGGCGTGCGGCGCGC
ATGGCGAGCAGCGCCCGACA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRNYPCSLPELGKHHRVCPDSLRTTSCKHIDEFGETMHATDDRLPRYQRLRDELAALIAARHWLPGEAIPTEQALAKRYD
VAIGTVRKAVDLLVADGMLERFQGRGTFVRRASFDSSLFRFFRFQGRHGERRIPESRILRREVVEAPSAVAAALQIPARA
SVIEMTRVRLIDGAPMLAEEIWLPYDRFAAFARLELASIGDLLYPVYEAHCNQIVASATETLTVEAIGPVHARLLRIEPG
TPAVVIERLAYGYDRRPLEWRRSRGPASEFIYQAEIR

Sequences:

>Translated_277_residues
MRNYPCSLPELGKHHRVCPDSLRTTSCKHIDEFGETMHATDDRLPRYQRLRDELAALIAARHWLPGEAIPTEQALAKRYD
VAIGTVRKAVDLLVADGMLERFQGRGTFVRRASFDSSLFRFFRFQGRHGERRIPESRILRREVVEAPSAVAAALQIPARA
SVIEMTRVRLIDGAPMLAEEIWLPYDRFAAFARLELASIGDLLYPVYEAHCNQIVASATETLTVEAIGPVHARLLRIEPG
TPAVVIERLAYGYDRRPLEWRRSRGPASEFIYQAEIR
>Mature_277_residues
MRNYPCSLPELGKHHRVCPDSLRTTSCKHIDEFGETMHATDDRLPRYQRLRDELAALIAARHWLPGEAIPTEQALAKRYD
VAIGTVRKAVDLLVADGMLERFQGRGTFVRRASFDSSLFRFFRFQGRHGERRIPESRILRREVVEAPSAVAAALQIPARA
SVIEMTRVRLIDGAPMLAEEIWLPYDRFAAFARLELASIGDLLYPVYEAHCNQIVASATETLTVEAIGPVHARLLRIEPG
TPAVVIERLAYGYDRRPLEWRRSRGPASEFIYQAEIR

Specific function: Global regulator that is part of the nutrient-sensing system. In the absence of N-acetylglucosamine 6-P, represses the phosphotransferase system (PTS) specific for the uptake of N- acetylglucosamine (PTSNag), and genes involved in the metabolism of chitin

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082252, Length=215, Percent_Identity=29.3023255813954, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1786950, Length=222, Percent_Identity=29.2792792792793, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1790118, Length=234, Percent_Identity=26.4957264957265, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 31490; Mature: 31490

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNYPCSLPELGKHHRVCPDSLRTTSCKHIDEFGETMHATDDRLPRYQRLRDELAALIAA
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHH
RHWLPGEAIPTEQALAKRYDVAIGTVRKAVDLLVADGMLERFQGRGTFVRRASFDSSLFR
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH
FFRFQGRHGERRIPESRILRREVVEAPSAVAAALQIPARASVIEMTRVRLIDGAPMLAEE
HHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
IWLPYDRFAAFARLELASIGDLLYPVYEAHCNQIVASATETLTVEAIGPVHARLLRIEPG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCC
TPAVVIERLAYGYDRRPLEWRRSRGPASEFIYQAEIR
CHHHHHHHHHHCCCCCCHHHHHCCCCHHHHEEECCCC
>Mature Secondary Structure
MRNYPCSLPELGKHHRVCPDSLRTTSCKHIDEFGETMHATDDRLPRYQRLRDELAALIAA
CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHH
RHWLPGEAIPTEQALAKRYDVAIGTVRKAVDLLVADGMLERFQGRGTFVRRASFDSSLFR
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH
FFRFQGRHGERRIPESRILRREVVEAPSAVAAALQIPARASVIEMTRVRLIDGAPMLAEE
HHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
IWLPYDRFAAFARLELASIGDLLYPVYEAHCNQIVASATETLTVEAIGPVHARLLRIEPG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEECCC
TPAVVIERLAYGYDRRPLEWRRSRGPASEFIYQAEIR
CHHHHHHHHHHCCCCCCHHHHHCCCCHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]