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The map label for this gene is 76819516

Identifier: 76819516

GI number: 76819516

Start: 2075786

End: 2077675

Strand: Direct

Name: 76819516

Synonym: BURPS1710b_A1700

Alternate gene names: NA

Gene position: 2075786-2077675 (Clockwise)

Preceding gene: 76817523

Following gene: 76819180

Centisome position: 65.24

GC content: 69.47

Gene sequence:

>1890_bases
GTGGACCCGCAATTGCTCGACTACTACAACCAGGAACTGATCTACATGCGCGAGCTCGGCGCCGAGTTCGCGCGCGCGCA
CCCGAAGATTGCGCGGCGCCTCGGAATGCAGGCGGGCGAAGTGGCCGATCCGTACGTCGAGCGGCTGATCGAATCGTTCT
GCTTCATGGCCGCGCGCATGCAGATCAAGCTCGATGCGGAATTTCCGCGCTTCACCGGCCGCCTGCTCGAGGTGCTCTAT
CCGACCTATGTCGCGCCGACGCCGTCGATGGCGGTCGCGCGCCTGTACCCGAGCCGCACCGAAGGCAATCTCGCGCAAGG
CTTTCGCGTCGCGCGCGGCACCGCGTTTGCCGCGCGCGTGCCGGCCGGCGAGAAAACCGCGTGCCGGTTTCGCAGCGGCC
AGGACGTGACGCTCTATCCGCTCGAGATCGCCGACGCGCGGCTGACGGGGATTCCGCCGGACATCCCGGCGCTCGACCGC
TACGTGCCGGCCGGCGCGCAGGTGCGCGGCGCGCTGCGCCTGCGGCTGCGCACGACCGGCAACATGCGCATCGCCGATCT
GCGGGGCCTCGACCGGCTGCCGCTGTATCTCGCGGGCGACGCTCAGGTGGCCTCGCACCTGTTCGAGCTGCTGCACGTGG
CCGGCGTCGCGACGCTCACGGCCGCGCCCGGCGAGTTCGCCGCGCCGGGCCGCCCGCCCGCGGCGGTTACCGTCGACGCG
CTCGCTCACGAAGGGCTCGGCGCCGACGAGGGGCTGTTGCCGCTCACGTGGGCGAAGTTCCATGGGCACAACCTGCTGCA
CGAATACTTCGCGTGCCCGGAGCGCTTCTATTTCGTCGCGCTGACGGGGCTCGAGGAAGGGTTGCGGCGCATCGCGGGCA
GCGAGGTCGAAATCGTCGTGCTGCTCGAACAATCGCCCGAGCGGCTCGCGGACGTCGTCGACGCGTCGCGCTTCGCGCTG
TTCTGCACGCCGGTGATCAACCTGTTTCCGCGCCACATGGACCGGATCGAACTGTCGAGCGGGCAGACCGAATGCCATCT
GGTGCCGGCCCGCCTCGCGCCGCTCGACTACGAAGTATTTTCCGTCGAGGCGATGTACGGGCAGGTCGCCGCGACATCGG
CCGAACTCGAGTTCCGGCCGCTGTACCAGACGCTGAACGACGACGAGAGCAACTATGGACGCTATTTCTCGACGCGGCGC
GAGCGCCGGCTCGTGTCGGATTTCGCGCGCCGCTACGGCACGCGCACGCCGTACGTCGGCACGGAGATGTTCGTATCGCT
CGTCGATCAGAACGAGGCGCCCTACAGCGAGGACATCCGCTATCTGTCGGTGGACGCGCTGGTGACGAACCGCGACCTGC
CGAGCCTCGTGCCGCGCGACGGCGTGCGCGACCTCACGGCGATCGAATCCGCGCCGATCGACAGCGTCGGCCTGATCCGC
GCGCCGTCCGCGCCGAAGGCGCCGTATGCGGAGCGCGAGATCGCGTGGCGGCTGATCCGCCAGTTGAACTTCAACTATCT
GCCGCTCGACGAGCTCGACCATCGCGCGGGCGGACAGGGCCTGCGCGGCCTGCTGCGGCTGTTTCTGGCGGGCGACGAGG
CCGACAGCCGGCGGCAGGTGGAAAGCCTTGTCGGCGTGAAGACGCGGCCCGTCACGCGCAAGCTGCCCGGCGCGGGCCCG
CTCGTGTTCGGGCGCGGCGTCGAGTGCGCGCTGAGCGTCGACGAAACGGGCTTCTCCGGCGTGAGCCCGTATCTGTTCGG
GCTCGTGCTCGAGCATTATCTAGCGCGGCACGTGTCGATCAACGTGTTCACGCAGACCGAGCTGAACTCGATCCAGCGCG
GCCGCATCGCGCGCTGGCCGGTGCGCATGGGCGCGCGGGGAGGCGCGTGA

Upstream 100 bases:

>100_bases
ATTCATGGTGCAAAGCGCGCTCGATCTCGAAACGAACCAGGTCAACATCACCGGCATGCGCGCGAGCTGACGCGCGGGCC
TGAAAAAACGGGGGGACACG

Downstream 100 bases:

>100_bases
TGGCGCGCGACATGACGCAGGCGGCCGTTGCCGACACGGCGCTGTCGCCGCAAGCGCTCGCGCGGCTGCGCGCCGAACCG
TGGCGCTATGGGTTCCTCGC

Product: SciC protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MDPQLLDYYNQELIYMRELGAEFARAHPKIARRLGMQAGEVADPYVERLIESFCFMAARMQIKLDAEFPRFTGRLLEVLY
PTYVAPTPSMAVARLYPSRTEGNLAQGFRVARGTAFAARVPAGEKTACRFRSGQDVTLYPLEIADARLTGIPPDIPALDR
YVPAGAQVRGALRLRLRTTGNMRIADLRGLDRLPLYLAGDAQVASHLFELLHVAGVATLTAAPGEFAAPGRPPAAVTVDA
LAHEGLGADEGLLPLTWAKFHGHNLLHEYFACPERFYFVALTGLEEGLRRIAGSEVEIVVLLEQSPERLADVVDASRFAL
FCTPVINLFPRHMDRIELSSGQTECHLVPARLAPLDYEVFSVEAMYGQVAATSAELEFRPLYQTLNDDESNYGRYFSTRR
ERRLVSDFARRYGTRTPYVGTEMFVSLVDQNEAPYSEDIRYLSVDALVTNRDLPSLVPRDGVRDLTAIESAPIDSVGLIR
APSAPKAPYAEREIAWRLIRQLNFNYLPLDELDHRAGGQGLRGLLRLFLAGDEADSRRQVESLVGVKTRPVTRKLPGAGP
LVFGRGVECALSVDETGFSGVSPYLFGLVLEHYLARHVSINVFTQTELNSIQRGRIARWPVRMGARGGA

Sequences:

>Translated_629_residues
MDPQLLDYYNQELIYMRELGAEFARAHPKIARRLGMQAGEVADPYVERLIESFCFMAARMQIKLDAEFPRFTGRLLEVLY
PTYVAPTPSMAVARLYPSRTEGNLAQGFRVARGTAFAARVPAGEKTACRFRSGQDVTLYPLEIADARLTGIPPDIPALDR
YVPAGAQVRGALRLRLRTTGNMRIADLRGLDRLPLYLAGDAQVASHLFELLHVAGVATLTAAPGEFAAPGRPPAAVTVDA
LAHEGLGADEGLLPLTWAKFHGHNLLHEYFACPERFYFVALTGLEEGLRRIAGSEVEIVVLLEQSPERLADVVDASRFAL
FCTPVINLFPRHMDRIELSSGQTECHLVPARLAPLDYEVFSVEAMYGQVAATSAELEFRPLYQTLNDDESNYGRYFSTRR
ERRLVSDFARRYGTRTPYVGTEMFVSLVDQNEAPYSEDIRYLSVDALVTNRDLPSLVPRDGVRDLTAIESAPIDSVGLIR
APSAPKAPYAEREIAWRLIRQLNFNYLPLDELDHRAGGQGLRGLLRLFLAGDEADSRRQVESLVGVKTRPVTRKLPGAGP
LVFGRGVECALSVDETGFSGVSPYLFGLVLEHYLARHVSINVFTQTELNSIQRGRIARWPVRMGARGGA
>Mature_629_residues
MDPQLLDYYNQELIYMRELGAEFARAHPKIARRLGMQAGEVADPYVERLIESFCFMAARMQIKLDAEFPRFTGRLLEVLY
PTYVAPTPSMAVARLYPSRTEGNLAQGFRVARGTAFAARVPAGEKTACRFRSGQDVTLYPLEIADARLTGIPPDIPALDR
YVPAGAQVRGALRLRLRTTGNMRIADLRGLDRLPLYLAGDAQVASHLFELLHVAGVATLTAAPGEFAAPGRPPAAVTVDA
LAHEGLGADEGLLPLTWAKFHGHNLLHEYFACPERFYFVALTGLEEGLRRIAGSEVEIVVLLEQSPERLADVVDASRFAL
FCTPVINLFPRHMDRIELSSGQTECHLVPARLAPLDYEVFSVEAMYGQVAATSAELEFRPLYQTLNDDESNYGRYFSTRR
ERRLVSDFARRYGTRTPYVGTEMFVSLVDQNEAPYSEDIRYLSVDALVTNRDLPSLVPRDGVRDLTAIESAPIDSVGLIR
APSAPKAPYAEREIAWRLIRQLNFNYLPLDELDHRAGGQGLRGLLRLFLAGDEADSRRQVESLVGVKTRPVTRKLPGAGP
LVFGRGVECALSVDETGFSGVSPYLFGLVLEHYLARHVSINVFTQTELNSIQRGRIARWPVRMGARGGA

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69735; Mature: 69735

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPQLLDYYNQELIYMRELGAEFARAHPKIARRLGMQAGEVADPYVERLIESFCFMAARM
CCCHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHE
QIKLDAEFPRFTGRLLEVLYPTYVAPTPSMAVARLYPSRTEGNLAQGFRVARGTAFAARV
EEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHCEEHHCCCEEEEEC
PAGEKTACRFRSGQDVTLYPLEIADARLTGIPPDIPALDRYVPAGAQVRGALRLRLRTTG
CCCCCCHHEECCCCCEEEEEEEECCCEECCCCCCCCHHHHCCCCCCCEEEEEEEEEEECC
NMRIADLRGLDRLPLYLAGDAQVASHLFELLHVAGVATLTAAPGEFAAPGRPPAAVTVDA
CEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEHHH
LAHEGLGADEGLLPLTWAKFHGHNLLHEYFACPERFYFVALTGLEEGLRRIAGSEVEIVV
HHHCCCCCCCCCCEEEHHHHHCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCEEEEE
LLEQSPERLADVVDASRFALFCTPVINLFPRHMDRIELSSGQTECHLVPARLAPLDYEVF
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCEE
SVEAMYGQVAATSAELEFRPLYQTLNDDESNYGRYFSTRRERRLVSDFARRYGTRTPYVG
EEHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
TEMFVSLVDQNEAPYSEDIRYLSVDALVTNRDLPSLVPRDGVRDLTAIESAPIDSVGLIR
HHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEE
APSAPKAPYAEREIAWRLIRQLNFNYLPLDELDHRAGGQGLRGLLRLFLAGDEADSRRQV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHH
ESLVGVKTRPVTRKLPGAGPLVFGRGVECALSVDETGFSGVSPYLFGLVLEHYLARHVSI
HHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEE
NVFTQTELNSIQRGRIARWPVRMGARGGA
EEEECHHHHHHHCCCEEECCHHCCCCCCC
>Mature Secondary Structure
MDPQLLDYYNQELIYMRELGAEFARAHPKIARRLGMQAGEVADPYVERLIESFCFMAARM
CCCHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHE
QIKLDAEFPRFTGRLLEVLYPTYVAPTPSMAVARLYPSRTEGNLAQGFRVARGTAFAARV
EEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHCEEHHCCCEEEEEC
PAGEKTACRFRSGQDVTLYPLEIADARLTGIPPDIPALDRYVPAGAQVRGALRLRLRTTG
CCCCCCHHEECCCCCEEEEEEEECCCEECCCCCCCCHHHHCCCCCCCEEEEEEEEEEECC
NMRIADLRGLDRLPLYLAGDAQVASHLFELLHVAGVATLTAAPGEFAAPGRPPAAVTVDA
CEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEHHH
LAHEGLGADEGLLPLTWAKFHGHNLLHEYFACPERFYFVALTGLEEGLRRIAGSEVEIVV
HHHCCCCCCCCCCEEEHHHHHCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCEEEEE
LLEQSPERLADVVDASRFALFCTPVINLFPRHMDRIELSSGQTECHLVPARLAPLDYEVF
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCCCCCEE
SVEAMYGQVAATSAELEFRPLYQTLNDDESNYGRYFSTRRERRLVSDFARRYGTRTPYVG
EEHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
TEMFVSLVDQNEAPYSEDIRYLSVDALVTNRDLPSLVPRDGVRDLTAIESAPIDSVGLIR
HHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCEEE
APSAPKAPYAEREIAWRLIRQLNFNYLPLDELDHRAGGQGLRGLLRLFLAGDEADSRRQV
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHH
ESLVGVKTRPVTRKLPGAGPLVFGRGVECALSVDETGFSGVSPYLFGLVLEHYLARHVSI
HHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCEE
NVFTQTELNSIQRGRIARWPVRMGARGGA
EEEECHHHHHHHCCCEEECCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA