Click here to switch to the map view.

The map label for this gene is 76819180

Identifier: 76819180

GI number: 76819180

Start: 2077675

End: 2078760

Strand: Direct

Name: 76819180

Synonym: BURPS1710b_A1701

Alternate gene names: NA

Gene position: 2077675-2078760 (Clockwise)

Preceding gene: 76819516

Following gene: 76819067

Centisome position: 65.3

GC content: 71.27

Gene sequence:

>1086_bases
ATGGCGCGCGACATGACGCAGGCGGCCGTTGCCGACACGGCGCTGTCGCCGCAAGCGCTCGCGCGGCTGCGCGCCGAACC
GTGGCGCTATGGGTTCCTCGCGCTGCTGCGCCGCATCGGCGCGGACGCGCGCATCGATCCGATCGGCAAGGCGAGGCGCC
CGCAGGCGGAGCCGTTTCGCCTCGGCCAGCAGCCGAGCCTCGCGTTCGCGCCGCGCGAGATCGCCAGCGTCGGCGACGCG
AACGGGCGGCTCAAGGTGCGGCTGTTCGGGCTCGGGATGCTGGGGCCGAACGGGCCGCTGCCGATCCACGTGACGGAGAT
CGCGCGCGATCGCGAGGAGAGCCGGCGCGATCCGACGCTCGGCAATTTTCTCGATATCTTCCATCATCGCTATCTGACGC
TGCTGTATCGCGCGTGGGCGTCGGCGCAGGCGGCGGCCGGCCTCGATCGTCCGGATGACGAACGGTTTTCGTTCTACGTC
GCGAGCCTCGCCGGCCAGGATCTCGACGAGGTCGGCGCGCGGCCGCTGCCCGCGCACGCGCGGCTGTCCGCCTCGCCGCA
TCTGGTGCGCGAGGCGCGCAACGCGGACGGCCTGCGAATGACGCTCGAACGTTACTTCGGCGTGCCGGTGACGCTGGAGG
AAAACGTATTTCACTGGATCGCCGTCGATCCGCTCGAGCACAGCCGGCTCGGCCGGCCCGGCGACGCATCGACGATGGCT
GCGGGCGCGCTGCTCGGCGAGCTGGTGCCGGATCGGCAGCACAAGTTCCGGCTCGTGTTCGGGCCGCTCGACATCGACGC
CTATCTGCGCTTCACGCCGCGGGGCGAGGATCTGCCGCGGCTCGTCGAATGGGTGCGGGCGTTCGTCGGCTACGAGTTCG
AGTGGGAGCTCGAGTTGCGGATCAAGCCGAACGGCGCGCCGCCCGCCGTGATGGGCGGCCCGCATCAACTCGGCTGGTCG
GGCTGGCTCGGCCGCTCGCCGTCCGGCGAGCCGGTGACGGGCATGCGTTTCGAACCCGAGCACTATGCGCACGGGTTCGC
GCGCGGCACGGCTCGCGACACGCGCGGCATGCGAGGTGAACGATGA

Upstream 100 bases:

>100_bases
ACGTGTCGATCAACGTGTTCACGCAGACCGAGCTGAACTCGATCCAGCGCGGCCGCATCGCGCGCTGGCCGGTGCGCATG
GGCGCGCGGGGAGGCGCGTG

Downstream 100 bases:

>100_bases
CCCCCAGCAGAAAACCGGCCGGCAGGGCGGCTGCCGCGCGTACGCCGAAGCCCGACGGCTGGATGGCGCCCGTCGATGCG
GCCGCGCCGTGCGGAGCGGA

Product: SciB protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; Type VI Secretion Protein VasG; Type VI Secretion Protein Family; T6ss R; Type VI Secretion System Core Protein; Periplasmic Chaperone Of Fimbral Assembly Machinery; Type VI Secretion System Protein EvpG; Conserved Protein; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MARDMTQAAVADTALSPQALARLRAEPWRYGFLALLRRIGADARIDPIGKARRPQAEPFRLGQQPSLAFAPREIASVGDA
NGRLKVRLFGLGMLGPNGPLPIHVTEIARDREESRRDPTLGNFLDIFHHRYLTLLYRAWASAQAAAGLDRPDDERFSFYV
ASLAGQDLDEVGARPLPAHARLSASPHLVREARNADGLRMTLERYFGVPVTLEENVFHWIAVDPLEHSRLGRPGDASTMA
AGALLGELVPDRQHKFRLVFGPLDIDAYLRFTPRGEDLPRLVEWVRAFVGYEFEWELELRIKPNGAPPAVMGGPHQLGWS
GWLGRSPSGEPVTGMRFEPEHYAHGFARGTARDTRGMRGER

Sequences:

>Translated_361_residues
MARDMTQAAVADTALSPQALARLRAEPWRYGFLALLRRIGADARIDPIGKARRPQAEPFRLGQQPSLAFAPREIASVGDA
NGRLKVRLFGLGMLGPNGPLPIHVTEIARDREESRRDPTLGNFLDIFHHRYLTLLYRAWASAQAAAGLDRPDDERFSFYV
ASLAGQDLDEVGARPLPAHARLSASPHLVREARNADGLRMTLERYFGVPVTLEENVFHWIAVDPLEHSRLGRPGDASTMA
AGALLGELVPDRQHKFRLVFGPLDIDAYLRFTPRGEDLPRLVEWVRAFVGYEFEWELELRIKPNGAPPAVMGGPHQLGWS
GWLGRSPSGEPVTGMRFEPEHYAHGFARGTARDTRGMRGER
>Mature_360_residues
ARDMTQAAVADTALSPQALARLRAEPWRYGFLALLRRIGADARIDPIGKARRPQAEPFRLGQQPSLAFAPREIASVGDAN
GRLKVRLFGLGMLGPNGPLPIHVTEIARDREESRRDPTLGNFLDIFHHRYLTLLYRAWASAQAAAGLDRPDDERFSFYVA
SLAGQDLDEVGARPLPAHARLSASPHLVREARNADGLRMTLERYFGVPVTLEENVFHWIAVDPLEHSRLGRPGDASTMAA
GALLGELVPDRQHKFRLVFGPLDIDAYLRFTPRGEDLPRLVEWVRAFVGYEFEWELELRIKPNGAPPAVMGGPHQLGWSG
WLGRSPSGEPVTGMRFEPEHYAHGFARGTARDTRGMRGER

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40198; Mature: 40067

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDMTQAAVADTALSPQALARLRAEPWRYGFLALLRRIGADARIDPIGKARRPQAEPFR
CCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
LGQQPSLAFAPREIASVGDANGRLKVRLFGLGMLGPNGPLPIHVTEIARDREESRRDPTL
CCCCCCCEECCHHHHHCCCCCCEEEEEEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCH
GNFLDIFHHRYLTLLYRAWASAQAAAGLDRPDDERFSFYVASLAGQDLDEVGARPLPAHA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEHHCCCCHHHHCCCCCCCCC
RLSASPHLVREARNADGLRMTLERYFGVPVTLEENVFHWIAVDPLEHSRLGRPGDASTMA
CCCCCHHHHHHHCCCCCHHHHHHHHCCCCEEECCCEEEEEEECCHHHHCCCCCCCHHHHH
AGALLGELVPDRQHKFRLVFGPLDIDAYLRFTPRGEDLPRLVEWVRAFVGYEFEWELELR
HHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEE
IKPNGAPPAVMGGPHQLGWSGWLGRSPSGEPVTGMRFEPEHYAHGFARGTARDTRGMRGE
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHCCCCHHHCCCCCC
R
C
>Mature Secondary Structure 
ARDMTQAAVADTALSPQALARLRAEPWRYGFLALLRRIGADARIDPIGKARRPQAEPFR
CCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
LGQQPSLAFAPREIASVGDANGRLKVRLFGLGMLGPNGPLPIHVTEIARDREESRRDPTL
CCCCCCCEECCHHHHHCCCCCCEEEEEEEEEEECCCCCCCCEEHHHHHHHHHHHHCCCCH
GNFLDIFHHRYLTLLYRAWASAQAAAGLDRPDDERFSFYVASLAGQDLDEVGARPLPAHA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEHHCCCCHHHHCCCCCCCCC
RLSASPHLVREARNADGLRMTLERYFGVPVTLEENVFHWIAVDPLEHSRLGRPGDASTMA
CCCCCHHHHHHHCCCCCHHHHHHHHCCCCEEECCCEEEEEEECCHHHHCCCCCCCHHHHH
AGALLGELVPDRQHKFRLVFGPLDIDAYLRFTPRGEDLPRLVEWVRAFVGYEFEWELELR
HHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEE
IKPNGAPPAVMGGPHQLGWSGWLGRSPSGEPVTGMRFEPEHYAHGFARGTARDTRGMRGE
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHCCCCHHHCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA