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The map label for this gene is nrtC [H]

Identifier: 76819286

GI number: 76819286

Start: 368645

End: 369706

Strand: Direct

Name: nrtC [H]

Synonym: BURPS1710b_A0247

Alternate gene names: 76819286

Gene position: 368645-369706 (Clockwise)

Preceding gene: 76818547

Following gene: 76818391

Centisome position: 11.59

GC content: 71.94

Gene sequence:

>1062_bases
ATGAACACAGCGCGCATCAAAGCAGCGGCCGCCGATATGCCGGAACGCGCCCGCCTGCGCATCGGCTTCGTCGCGCTGAG
CGACGCCGCGCCGCTCGTCGCCGCGCAGCGGCTCGAGCTCGGCGCACGCTACGGCTTGACGCTCGAGCTCTGCCGGCAGC
CGTCGTGGGCGAGCATTCGCGACAAGCTGCTGTCGGGCGAGCTCGACGCCGCGCACGCGCTGTACGGGCTCGTCTACGGC
GTGCAGCTCGGCATCGGCGGGCCGCGCGCCGACCTGGCGGTGCCGATGGTGCTGAACCGCAACGGCCAGGCGATCACGTT
CTCGAACCGGCTCGCCGACGCCTACCGCGCGTCGGGCGAGCTGAAGGCCGCGCTCGCGACACTCGGCCGGCGCCCCGTGT
TCGCGCAGACGTTCCCGACCGGCACGCATGCGATGTGGCTGTATCACTGGCTCGCGTCGCACGGCGTCGATCCGCTGCAC
GATGTCCGCAGCGTCGTGATTCCGCCGCCGGAGATGGTCGGCGCGCTCGCAGCGGGCGAACTCGACGGGCTGTGCGTGGG
CGAGCCGTGGAATGCGGTCGCCGAGGCGCGCGGCGCGGGCAGGACGGTCGCGGCGACGAGCGAAGTGTGGCCCGACCATC
CGGAAAAGGCGCTCGCGTGCCGGCGCGAGTTCGTCGCACTGTATCCGAATACGGCGCGCCTGCTGGTGCGCACGCTGCTC
GATGCGTGCGAATGGCTCGACGACGCGGACCACCGAATGAAGGCGGCCGCATGGCTGGCGGAGCCGGACGCGATCGGCGT
GCCGATCGGGCAGATCGCGCCGCGGCTGCTCGGCGACTACGGCGCGGGGCCGTTTGCGCAGCCGCCCGCGCCGATCAAGT
TCTACGAGCACGGAACGGTGAATCGGCCGGCCGCGAGCGATGGGATGTGGTTCCTGTCGCAGTATCGGCGCTGGGGGATG
CTGAGCGGCGACGTCGACGATGCGGCGATCGCGAACGGCGTCGCGCACACGGCGCTCTACGACGAAGCGGTCGCGCTCGG
AGGGGCACGACGCGGCGAGTGA

Upstream 100 bases:

>100_bases
CGCTGCGCCGCAGCGCGATGGATCAGGGCATCCGGATCGTCGAGGCGGCCCGCCGGCTGCTCGCGGCGCACTCGCAATCT
TGAACGAAGGTGCAAAACGC

Downstream 100 bases:

>100_bases
AGCGGCGCGTTTGACGCGGCGCGCATCACGCATCACGCAGCACGCAGCACGCAGCACAAGGCGCGCACCGCGCGGCGGAC
TTCGCGCGCGATCCGCGCCG

Product: nitrate transport ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNTARIKAAAADMPERARLRIGFVALSDAAPLVAAQRLELGARYGLTLELCRQPSWASIRDKLLSGELDAAHALYGLVYG
VQLGIGGPRADLAVPMVLNRNGQAITFSNRLADAYRASGELKAALATLGRRPVFAQTFPTGTHAMWLYHWLASHGVDPLH
DVRSVVIPPPEMVGALAAGELDGLCVGEPWNAVAEARGAGRTVAATSEVWPDHPEKALACRREFVALYPNTARLLVRTLL
DACEWLDDADHRMKAAAWLAEPDAIGVPIGQIAPRLLGDYGAGPFAQPPAPIKFYEHGTVNRPAASDGMWFLSQYRRWGM
LSGDVDDAAIANGVAHTALYDEAVALGGARRGE

Sequences:

>Translated_353_residues
MNTARIKAAAADMPERARLRIGFVALSDAAPLVAAQRLELGARYGLTLELCRQPSWASIRDKLLSGELDAAHALYGLVYG
VQLGIGGPRADLAVPMVLNRNGQAITFSNRLADAYRASGELKAALATLGRRPVFAQTFPTGTHAMWLYHWLASHGVDPLH
DVRSVVIPPPEMVGALAAGELDGLCVGEPWNAVAEARGAGRTVAATSEVWPDHPEKALACRREFVALYPNTARLLVRTLL
DACEWLDDADHRMKAAAWLAEPDAIGVPIGQIAPRLLGDYGAGPFAQPPAPIKFYEHGTVNRPAASDGMWFLSQYRRWGM
LSGDVDDAAIANGVAHTALYDEAVALGGARRGE
>Mature_353_residues
MNTARIKAAAADMPERARLRIGFVALSDAAPLVAAQRLELGARYGLTLELCRQPSWASIRDKLLSGELDAAHALYGLVYG
VQLGIGGPRADLAVPMVLNRNGQAITFSNRLADAYRASGELKAALATLGRRPVFAQTFPTGTHAMWLYHWLASHGVDPLH
DVRSVVIPPPEMVGALAAGELDGLCVGEPWNAVAEARGAGRTVAATSEVWPDHPEKALACRREFVALYPNTARLLVRTLL
DACEWLDDADHRMKAAAWLAEPDAIGVPIGQIAPRLLGDYGAGPFAQPPAPIKFYEHGTVNRPAASDGMWFLSQYRRWGM
LSGDVDDAAIANGVAHTALYDEAVALGGARRGE

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 37826; Mature: 37826

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTARIKAAAADMPERARLRIGFVALSDAAPLVAAQRLELGARYGLTLELCRQPSWASIR
CCCCCEEHHHCCCCCHHEEEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHCCCCHHHHH
DKLLSGELDAAHALYGLVYGVQLGIGGPRADLAVPMVLNRNGQAITFSNRLADAYRASGE
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCH
LKAALATLGRRPVFAQTFPTGTHAMWLYHWLASHGVDPLHDVRSVVIPPPEMVGALAAGE
HHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCC
LDGLCVGEPWNAVAEARGAGRTVAATSEVWPDHPEKALACRREFVALYPNTARLLVRTLL
CCCEEECCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHH
DACEWLDDADHRMKAAAWLAEPDAIGVPIGQIAPRLLGDYGAGPFAQPPAPIKFYEHGTV
HHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
NRPAASDGMWFLSQYRRWGMLSGDVDDAAIANGVAHTALYDEAVALGGARRGE
CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNTARIKAAAADMPERARLRIGFVALSDAAPLVAAQRLELGARYGLTLELCRQPSWASIR
CCCCCEEHHHCCCCCHHEEEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHCCCCHHHHH
DKLLSGELDAAHALYGLVYGVQLGIGGPRADLAVPMVLNRNGQAITFSNRLADAYRASGE
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCH
LKAALATLGRRPVFAQTFPTGTHAMWLYHWLASHGVDPLHDVRSVVIPPPEMVGALAAGE
HHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHCCC
LDGLCVGEPWNAVAEARGAGRTVAATSEVWPDHPEKALACRREFVALYPNTARLLVRTLL
CCCEEECCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHEECCCHHHHHHHHHH
DACEWLDDADHRMKAAAWLAEPDAIGVPIGQIAPRLLGDYGAGPFAQPPAPIKFYEHGTV
HHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC
NRPAASDGMWFLSQYRRWGMLSGDVDDAAIANGVAHTALYDEAVALGGARRGE
CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]