| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is 76818391
Identifier: 76818391
GI number: 76818391
Start: 371896
End: 374427
Strand: Direct
Name: 76818391
Synonym: BURPS1710b_A0249
Alternate gene names: NA
Gene position: 371896-374427 (Clockwise)
Preceding gene: 76819286
Following gene: 76818595
Centisome position: 11.69
GC content: 69.79
Gene sequence:
>2532_bases TTGCGCCGACGCGCGACAGGCTCGCGTCGCACTCGGCAAGCGCGGTGCGCATCGGCGCGCCGCGCGTCATCCGCATTCCA CCCGGCTCGCATCCGGCCGCAGCGGCAGCGGCTCAACCGGCCGGGGCGGCGACGGCTACGCGCGCGACGCGCGCACGGCA ACCACCGCGCGTTGCCGCATCGGCACGCGCCGGCGCACCGCGATCCCGCGAGCATCCGGCCGTCTCGCACCGAGCATCCC GATTCAAGCGTCATTGCGCAGTGCTTTCGCCGCCCGGCGACGCCCGTTCATCGGGCTCATCGACACAATTTCCCTTGCCC ACGAGCAAATGGAGGAGATATGCAGACGCGTCTCGATACGAGGAAGGTCTTCACCTATTTGTTTGCATTTTTCATTGCCT TTCTCGCGAGCTGTTCCGATCACGACGACATTTCGGGCGGCGGCGAGCCGCCCGCGTCCGCGCTCGCGTTCAGGCTCGAT CGCGGCGGGCAGATCAATGCGTTCTATCGGCAGGACAAGATCGCCGCGCATCTGCTGATGCGCGCGTCGACGAAGCCGCG CCTGCTCGTCGTGTTTCCGGCGGGCAACAGCGGCACGGGCCTCTGGTTCGGCGACACGCCGCAGCCCGTCAACTGGAGCC AGGACACGCCGATCGCGCCCGTCACGACGCAGGACGCGGCGGGCCGGCCGCTGTACGGGATCGGCGTCGACGTGTCGGCC GACGTGAGCAACCTGTCGATCAGGCAGGCGCTGCTGAGCTCCGTGCGCTTCCTGCGCGACTACAACGGCGGCGCGACCGT GCCTTCCGACATCGTCGTGCAGCCGTCCGTGTCGGACAACGTCGCGACCTGGCAGCGCAATCGCGTCGACGGCGCGCCGG GCTACGCGTTGCGCGTCACGGTGCTCGACGGCGGCGCGGTGGCCGCCGACGGCACCGGCAGGCTCATGCTGCAATCGCCG TCCGGCGCGCCGACGCTGCGCCTGCGCGTCGAAGCGTTCAGCGGCGAGACGCCGCTGCAGCCGATCACGCACGCGAACCT GTTCACGTCGGCGGTCAACCCCGATCCGCAGAGCCAGAACGTGTTCGAATTCCTGAGCTTCAGCGACAAGCTGCTCGCCG GCTCCTGGCAGTACGACACCTACTTCGGCCGTGACACGCTGATCTCGGTGCGCATGCTGATGCCCGTGCTGCAGCCGGAC GTGATCGAAGCCGGCCTCGGCTCGGTGCTCGACCGCCTGTCGCCGGACGGCAAGGTCGCGCACGAGGAAGGCATCGGCGA ATTCGCGCTGATCGACAACCTCAAGCACGGCCGCCCGAACGATCCGACGCCGACCTACGACTACAAGATGATCGACGGCG ACTACCTGCTCGCGCCGATCATGGAGGACTGGCTGATCGAAGATCCGCGCGGGCAGGCGCGCGCCGCCGCGTATCTCGCG CAAAAGGGCGACGACGGCGTGACCAACGGCAGCCGCTTCGTCGCCAATCTGCTGCGCGTCGCGCGGACCGCGCAGCCGTT CGCGCAGCAGGCGCTCGCCGCGAACCTGATCCGTCTGCGCCCCGGCGAGATCGTCGGCAACTGGCGCGACAGCACCGACG GCATCGGCGGCGGCGTCTACCCGTACGACGTGAACGTCGCGCTGGTGCCGGCCGCGCTGCGCGCGACGAGCAACTTCCTC GCACGCGGGCTGCTCGACCCGTACCTGAGCGCCGATCAGCGCGCCGTGCTCGCGAGCGCGGGCGCGGCGGCCGATGTCTG GGAGCGCGCCGCGCCGCCGTACTTCCAGGTGGCCGTCACGCCGAACGACGCGCGCGCGAAGCTCGCCGCATATGCGCCGC AGGCGGGCGTGCCGGCCGGCATGGTGCCGAACACGGCGTTGCAGTTCGACGCGATCGCGCTCGACGCGAACGGCAATCCG ATTCCGATCATGCACTCGGACGGCGGCTTCGTGCTGCTGTTCGGCAATCCGTCGCCCGCGCTGCTCGCGCGCATCGTCAC CGACGTGATGCGGCCGTTCCCGGTCGGGCTCGTGACCGACGTCGGCATGCTGATCGCCAATCCCGCGTACGCGGACCCGA CGCTATGGCCGCGCTTCACGAGCTCCGCGTATCACGGCACGGTGATCTGGTCCTGGCAGCAGGCGATGTGGGTCGCGGGC CTCGACCGCCAGCTCGCGCGCACCGATTTGCCGGGCGACGTGCGCACGCTGCTCACGCAGGCGCGCCAGCAGATCTGGCA GGTGATCGCGAACGCGAAGGACATGCGCTTGACCGAGATGTGGTCGTGGTCGTACGCGAACGGGCAATACCGGACGGAGG CGTTCGGCACGCGCAGCACCGACGTGACCGAGGCGAACGCCGCGCAGCTGTGGAGCACGACGTATCTGGCGGTTCGGGAT CCGCAACTGCGCGCGGGCAAGTACTGGTGGGAAGCCCGCGCGGCCGGCGGCGACGCGCCGAGGCGCGGCTCGACGGCAGC GGCGGAGAATGCCGCGAACGGCTTGAATGCCGTGAAAGGCGCGGCTTCGTGA
Upstream 100 bases:
>100_bases CATTCCTACGACGAATGGTTTAGCATGCAGTCGTGCTGACGAACCACGCCCGGGTGTGGGAGCGAGCGCGCGGCACGCGA GGTAGCCGAAGTCCAACCGT
Downstream 100 bases:
>100_bases CACGCCGGGCGCGCGATCGTTCGATCGCGCATCCACGTCGATCGCGCGCCGCGTGAAAGCGCGCGTGGCCGCGCGGTTCG AGCGGACCGGCGCGGCGTCG
Product: putative lipoprotein
Products: NA
Alternate protein names: Type V Secretory Pathway Adhesin AidA; Glycogen Debranching
Number of amino acids: Translated: 843; Mature: 843
Protein sequence:
>843_residues MRRRATGSRRTRQARCASARRASSAFHPARIRPQRQRLNRPGRRRLRARRAHGNHRALPHRHAPAHRDPASIRPSRTEHP DSSVIAQCFRRPATPVHRAHRHNFPCPRANGGDMQTRLDTRKVFTYLFAFFIAFLASCSDHDDISGGGEPPASALAFRLD RGGQINAFYRQDKIAAHLLMRASTKPRLLVVFPAGNSGTGLWFGDTPQPVNWSQDTPIAPVTTQDAAGRPLYGIGVDVSA DVSNLSIRQALLSSVRFLRDYNGGATVPSDIVVQPSVSDNVATWQRNRVDGAPGYALRVTVLDGGAVAADGTGRLMLQSP SGAPTLRLRVEAFSGETPLQPITHANLFTSAVNPDPQSQNVFEFLSFSDKLLAGSWQYDTYFGRDTLISVRMLMPVLQPD VIEAGLGSVLDRLSPDGKVAHEEGIGEFALIDNLKHGRPNDPTPTYDYKMIDGDYLLAPIMEDWLIEDPRGQARAAAYLA QKGDDGVTNGSRFVANLLRVARTAQPFAQQALAANLIRLRPGEIVGNWRDSTDGIGGGVYPYDVNVALVPAALRATSNFL ARGLLDPYLSADQRAVLASAGAAADVWERAAPPYFQVAVTPNDARAKLAAYAPQAGVPAGMVPNTALQFDAIALDANGNP IPIMHSDGGFVLLFGNPSPALLARIVTDVMRPFPVGLVTDVGMLIANPAYADPTLWPRFTSSAYHGTVIWSWQQAMWVAG LDRQLARTDLPGDVRTLLTQARQQIWQVIANAKDMRLTEMWSWSYANGQYRTEAFGTRSTDVTEANAAQLWSTTYLAVRD PQLRAGKYWWEARAAGGDAPRRGSTAAAENAANGLNAVKGAAS
Sequences:
>Translated_843_residues MRRRATGSRRTRQARCASARRASSAFHPARIRPQRQRLNRPGRRRLRARRAHGNHRALPHRHAPAHRDPASIRPSRTEHP DSSVIAQCFRRPATPVHRAHRHNFPCPRANGGDMQTRLDTRKVFTYLFAFFIAFLASCSDHDDISGGGEPPASALAFRLD RGGQINAFYRQDKIAAHLLMRASTKPRLLVVFPAGNSGTGLWFGDTPQPVNWSQDTPIAPVTTQDAAGRPLYGIGVDVSA DVSNLSIRQALLSSVRFLRDYNGGATVPSDIVVQPSVSDNVATWQRNRVDGAPGYALRVTVLDGGAVAADGTGRLMLQSP SGAPTLRLRVEAFSGETPLQPITHANLFTSAVNPDPQSQNVFEFLSFSDKLLAGSWQYDTYFGRDTLISVRMLMPVLQPD VIEAGLGSVLDRLSPDGKVAHEEGIGEFALIDNLKHGRPNDPTPTYDYKMIDGDYLLAPIMEDWLIEDPRGQARAAAYLA QKGDDGVTNGSRFVANLLRVARTAQPFAQQALAANLIRLRPGEIVGNWRDSTDGIGGGVYPYDVNVALVPAALRATSNFL ARGLLDPYLSADQRAVLASAGAAADVWERAAPPYFQVAVTPNDARAKLAAYAPQAGVPAGMVPNTALQFDAIALDANGNP IPIMHSDGGFVLLFGNPSPALLARIVTDVMRPFPVGLVTDVGMLIANPAYADPTLWPRFTSSAYHGTVIWSWQQAMWVAG LDRQLARTDLPGDVRTLLTQARQQIWQVIANAKDMRLTEMWSWSYANGQYRTEAFGTRSTDVTEANAAQLWSTTYLAVRD PQLRAGKYWWEARAAGGDAPRRGSTAAAENAANGLNAVKGAAS >Mature_843_residues MRRRATGSRRTRQARCASARRASSAFHPARIRPQRQRLNRPGRRRLRARRAHGNHRALPHRHAPAHRDPASIRPSRTEHP DSSVIAQCFRRPATPVHRAHRHNFPCPRANGGDMQTRLDTRKVFTYLFAFFIAFLASCSDHDDISGGGEPPASALAFRLD RGGQINAFYRQDKIAAHLLMRASTKPRLLVVFPAGNSGTGLWFGDTPQPVNWSQDTPIAPVTTQDAAGRPLYGIGVDVSA DVSNLSIRQALLSSVRFLRDYNGGATVPSDIVVQPSVSDNVATWQRNRVDGAPGYALRVTVLDGGAVAADGTGRLMLQSP SGAPTLRLRVEAFSGETPLQPITHANLFTSAVNPDPQSQNVFEFLSFSDKLLAGSWQYDTYFGRDTLISVRMLMPVLQPD VIEAGLGSVLDRLSPDGKVAHEEGIGEFALIDNLKHGRPNDPTPTYDYKMIDGDYLLAPIMEDWLIEDPRGQARAAAYLA QKGDDGVTNGSRFVANLLRVARTAQPFAQQALAANLIRLRPGEIVGNWRDSTDGIGGGVYPYDVNVALVPAALRATSNFL ARGLLDPYLSADQRAVLASAGAAADVWERAAPPYFQVAVTPNDARAKLAAYAPQAGVPAGMVPNTALQFDAIALDANGNP IPIMHSDGGFVLLFGNPSPALLARIVTDVMRPFPVGLVTDVGMLIANPAYADPTLWPRFTSSAYHGTVIWSWQQAMWVAG LDRQLARTDLPGDVRTLLTQARQQIWQVIANAKDMRLTEMWSWSYANGQYRTEAFGTRSTDVTEANAAQLWSTTYLAVRD PQLRAGKYWWEARAAGGDAPRRGSTAAAENAANGLNAVKGAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91643; Mature: 91643
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRATGSRRTRQARCASARRASSAFHPARIRPQRQRLNRPGRRRLRARRAHGNHRALPH CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCC RHAPAHRDPASIRPSRTEHPDSSVIAQCFRRPATPVHRAHRHNFPCPRANGGDMQTRLDT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHH RKVFTYLFAFFIAFLASCSDHDDISGGGEPPASALAFRLDRGGQINAFYRQDKIAAHLLM HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEECCCCEEEEEHHHHHHHHHHHH RASTKPRLLVVFPAGNSGTGLWFGDTPQPVNWSQDTPIAPVTTQDAAGRPLYGIGVDVSA HCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEECCCCCC DVSNLSIRQALLSSVRFLRDYNGGATVPSDIVVQPSVSDNVATWQRNRVDGAPGYALRVT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCEEEEEE VLDGGAVAADGTGRLMLQSPSGAPTLRLRVEAFSGETPLQPITHANLFTSAVNPDPQSQN EEECCEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCH VFEFLSFSDKLLAGSWQYDTYFGRDTLISVRMLMPVLQPDVIEAGLGSVLDRLSPDGKVA HHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCH HEEGIGEFALIDNLKHGRPNDPTPTYDYKMIDGDYLLAPIMEDWLIEDPRGQARAAAYLA HHCCCCCEEEHHCCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHCCCCCCHHHHHHHHH QKGDDGVTNGSRFVANLLRVARTAQPFAQQALAANLIRLRPGEIVGNWRDSTDGIGGGVY HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC PYDVNVALVPAALRATSNFLARGLLDPYLSADQRAVLASAGAAADVWERAAPPYFQVAVT EEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCEEEEEEC PNDARAKLAAYAPQAGVPAGMVPNTALQFDAIALDANGNPIPIMHSDGGFVLLFGNPSPA CCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCCHH LLARIVTDVMRPFPVGLVTDVGMLIANPAYADPTLWPRFTSSAYHGTVIWSWQQAMWVAG HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH LDRQLARTDLPGDVRTLLTQARQQIWQVIANAKDMRLTEMWSWSYANGQYRTEAFGTRST HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCEECCCCCEEEHHCCCCCC DVTEANAAQLWSTTYLAVRDPQLRAGKYWWEARAAGGDAPRRGSTAAAENAANGLNAVKG CCCCCCHHHHHHEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC AAS CCC >Mature Secondary Structure MRRRATGSRRTRQARCASARRASSAFHPARIRPQRQRLNRPGRRRLRARRAHGNHRALPH CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCC RHAPAHRDPASIRPSRTEHPDSSVIAQCFRRPATPVHRAHRHNFPCPRANGGDMQTRLDT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHH RKVFTYLFAFFIAFLASCSDHDDISGGGEPPASALAFRLDRGGQINAFYRQDKIAAHLLM HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEECCCCEEEEEHHHHHHHHHHHH RASTKPRLLVVFPAGNSGTGLWFGDTPQPVNWSQDTPIAPVTTQDAAGRPLYGIGVDVSA HCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEECCCCCC DVSNLSIRQALLSSVRFLRDYNGGATVPSDIVVQPSVSDNVATWQRNRVDGAPGYALRVT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCEEEEEE VLDGGAVAADGTGRLMLQSPSGAPTLRLRVEAFSGETPLQPITHANLFTSAVNPDPQSQN EEECCEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCH VFEFLSFSDKLLAGSWQYDTYFGRDTLISVRMLMPVLQPDVIEAGLGSVLDRLSPDGKVA HHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCH HEEGIGEFALIDNLKHGRPNDPTPTYDYKMIDGDYLLAPIMEDWLIEDPRGQARAAAYLA HHCCCCCEEEHHCCCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHCCCCCCHHHHHHHHH QKGDDGVTNGSRFVANLLRVARTAQPFAQQALAANLIRLRPGEIVGNWRDSTDGIGGGVY HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC PYDVNVALVPAALRATSNFLARGLLDPYLSADQRAVLASAGAAADVWERAAPPYFQVAVT EEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCEEEEEEC PNDARAKLAAYAPQAGVPAGMVPNTALQFDAIALDANGNPIPIMHSDGGFVLLFGNPSPA CCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCCHH LLARIVTDVMRPFPVGLVTDVGMLIANPAYADPTLWPRFTSSAYHGTVIWSWQQAMWVAG HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH LDRQLARTDLPGDVRTLLTQARQQIWQVIANAKDMRLTEMWSWSYANGQYRTEAFGTRST HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCEECCCCCEEEHHCCCCCC DVTEANAAQLWSTTYLAVRDPQLRAGKYWWEARAAGGDAPRRGSTAAAENAANGLNAVKG CCCCCCHHHHHHEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC AAS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA