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The map label for this gene is ytnA [H]

Identifier: 76818902

GI number: 76818902

Start: 1635216

End: 1636646

Strand: Direct

Name: ytnA [H]

Synonym: BURPS1710b_A1324

Alternate gene names: 76818902

Gene position: 1635216-1636646 (Clockwise)

Preceding gene: 76818404

Following gene: 76819189

Centisome position: 51.39

GC content: 68.27

Gene sequence:

>1431_bases
ATGAGTTCGGAACGGCAATTTCAGGCGATCGCGCAACGCGAAGGCGGGCTGCGCCGCACGCTGAGCGCGAGGCAGATGAC
GATGATCGCGATCGGCGGCGCGATCGGCACGGGCCTCTTTCTCGGCAGCGGCTTCGCGATCGGCTTCGCGGGGCCGAGCG
TGCTGATCAGCTATGCGATCGGCGCGCTGATTTCGCTGCTGCTGATGGGCTGCCTCGCGGAGATGACGGTCGCGCATCCG
ACATCGGGATCGTTCGGCGCGCACGCCGAGCATTACCTCGGCCCGTGGGCGGGCTTTCTCGTGCGCTATGCGTATTGGGC
GTGCATCGTGCTCGCGGTCGGCACCGAAGTCACGGCCGTCGCGCTGTACATGAAGTACTGGCTTCCGGCCGTGCCGGGCT
GGGTCTGGATCGCGGGCTTCTCGGCCGTGCTCGTGTTCGTCAACGCGCTGAGCGTCGACGTGTTCGGCTCGGTCGAATAC
GGGTTCTCGGTCGTCAAGATCGCGGCGATCGTCGCGTTCATCGCGATCGGCGGCTACGTGGTGTTCGTCGATCCGTCGCT
CGTCGCGGACCCGAACGCGGGCGCGCCGGGCCTGCGCCACTACTTCGGGCACGGCGGCTTCTTCCCGAAAGGCCTGTGGG
GAACGTGGGTGGCGGTGATCGTGTCGATCTTCAGCTATCTGAGCATCGAGATGATCGCGGTGGCCGCGGGCGAGGCGCAG
GACCCGGAGCGCGCGGTCACGCGCGCGTTCCGCTCGACGGTGATTCGCCTCGTGCTGTTCTATCTCGTCACGCTCGCGCT
GATGCTCGCGATCGTGCCGTGGACCGCGGCCGGCCGCGACGAGAGCCCGTTCGTCAAGGTGATGATCGCGATTCATCTGC
CGGGCGCGGCGGGCGTCATCAACTTCGTCGTCCTGATCGCCGCGCTCTCCGCGATGAACAGCCAGCTCTACATCACGACG
CGGATGATGTTCAGCCTCGCGTGCGCGGGCCACGCGCCGCGCGGCCTCGGCCGGCTGACGCGCCGCGGCGTGCCGCTCAA
CGCGCTGCTGCTGTCGACGGCCGGCATCGCGATCGCGACGCTCGTGAGCATCGCCTACCCGGACGCGTCGTTCACGATCA
TGATGGCGATCTCGATGTTCGGCGCGATGTTCACGTGGACGATGATCTTCGTCACGCACTACTTCTTCCGCCGCAAGCGC
GCGGCGCAGGGCCTGCCGCCGCCCCGCTTCCGGATGCCCGGCTTCCCGCTCGCGACGCTCGCCGGCGCGGCGCTGATGCT
CGCGATCATGGCGACGACGTACTTTACGCCCGAGTTCCACATGACGCTCGTGTTCGGCGCGCCGTTCCTCGCCGCGCTGA
GCGTGCTGTACTTCGCGCGCTATCGCCGCCGGCCGCACGCGCTCGCGCGGGCCGAATCGCAGCCGCGTTGA

Upstream 100 bases:

>100_bases
GGCCTGCGGCACATGTTCTGACGAAACGGATCGTTCACGACGATCGCGCGGGCGCCACGGCGCGCCCGCGATCCAATCAA
GACAATCGGAGGAGCATCCA

Downstream 100 bases:

>100_bases
CGCACGGCGCCGCGCGTTCGCGCGATGCGCGCCGCCGGCCGCGGCCGCGCATCGGGCAGCGCGGCCCGCCGCGCGGTCAG
GCCGGATCGAGGCTCGTCTC

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MSSERQFQAIAQREGGLRRTLSARQMTMIAIGGAIGTGLFLGSGFAIGFAGPSVLISYAIGALISLLLMGCLAEMTVAHP
TSGSFGAHAEHYLGPWAGFLVRYAYWACIVLAVGTEVTAVALYMKYWLPAVPGWVWIAGFSAVLVFVNALSVDVFGSVEY
GFSVVKIAAIVAFIAIGGYVVFVDPSLVADPNAGAPGLRHYFGHGGFFPKGLWGTWVAVIVSIFSYLSIEMIAVAAGEAQ
DPERAVTRAFRSTVIRLVLFYLVTLALMLAIVPWTAAGRDESPFVKVMIAIHLPGAAGVINFVVLIAALSAMNSQLYITT
RMMFSLACAGHAPRGLGRLTRRGVPLNALLLSTAGIAIATLVSIAYPDASFTIMMAISMFGAMFTWTMIFVTHYFFRRKR
AAQGLPPPRFRMPGFPLATLAGAALMLAIMATTYFTPEFHMTLVFGAPFLAALSVLYFARYRRRPHALARAESQPR

Sequences:

>Translated_476_residues
MSSERQFQAIAQREGGLRRTLSARQMTMIAIGGAIGTGLFLGSGFAIGFAGPSVLISYAIGALISLLLMGCLAEMTVAHP
TSGSFGAHAEHYLGPWAGFLVRYAYWACIVLAVGTEVTAVALYMKYWLPAVPGWVWIAGFSAVLVFVNALSVDVFGSVEY
GFSVVKIAAIVAFIAIGGYVVFVDPSLVADPNAGAPGLRHYFGHGGFFPKGLWGTWVAVIVSIFSYLSIEMIAVAAGEAQ
DPERAVTRAFRSTVIRLVLFYLVTLALMLAIVPWTAAGRDESPFVKVMIAIHLPGAAGVINFVVLIAALSAMNSQLYITT
RMMFSLACAGHAPRGLGRLTRRGVPLNALLLSTAGIAIATLVSIAYPDASFTIMMAISMFGAMFTWTMIFVTHYFFRRKR
AAQGLPPPRFRMPGFPLATLAGAALMLAIMATTYFTPEFHMTLVFGAPFLAALSVLYFARYRRRPHALARAESQPR
>Mature_475_residues
SSERQFQAIAQREGGLRRTLSARQMTMIAIGGAIGTGLFLGSGFAIGFAGPSVLISYAIGALISLLLMGCLAEMTVAHPT
SGSFGAHAEHYLGPWAGFLVRYAYWACIVLAVGTEVTAVALYMKYWLPAVPGWVWIAGFSAVLVFVNALSVDVFGSVEYG
FSVVKIAAIVAFIAIGGYVVFVDPSLVADPNAGAPGLRHYFGHGGFFPKGLWGTWVAVIVSIFSYLSIEMIAVAAGEAQD
PERAVTRAFRSTVIRLVLFYLVTLALMLAIVPWTAAGRDESPFVKVMIAIHLPGAAGVINFVVLIAALSAMNSQLYITTR
MMFSLACAGHAPRGLGRLTRRGVPLNALLLSTAGIAIATLVSIAYPDASFTIMMAISMFGAMFTWTMIFVTHYFFRRKRA
AQGLPPPRFRMPGFPLATLAGAALMLAIMATTYFTPEFHMTLVFGAPFLAALSVLYFARYRRRPHALARAESQPR

Specific function: Transporter For The Intake Of S-Methylmethionine. [C]

COG id: COG1113

COG function: function code E; Gamma-aminobutyrate permease and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081708, Length=469, Percent_Identity=36.6737739872068, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1786789, Length=425, Percent_Identity=37.1764705882353, Blast_Score=292, Evalue=3e-80,
Organism=Escherichia coli, GI1786302, Length=451, Percent_Identity=35.920177383592, Blast_Score=287, Evalue=1e-78,
Organism=Escherichia coli, GI1786602, Length=463, Percent_Identity=34.1252699784017, Blast_Score=273, Evalue=3e-74,
Organism=Escherichia coli, GI1790653, Length=392, Percent_Identity=35.4591836734694, Blast_Score=267, Evalue=9e-73,
Organism=Escherichia coli, GI48994972, Length=452, Percent_Identity=32.9646017699115, Blast_Score=242, Evalue=4e-65,
Organism=Escherichia coli, GI87081915, Length=409, Percent_Identity=33.7408312958435, Blast_Score=235, Evalue=5e-63,
Organism=Escherichia coli, GI1788480, Length=448, Percent_Identity=35.4910714285714, Blast_Score=232, Evalue=5e-62,
Organism=Escherichia coli, GI1789017, Length=430, Percent_Identity=30.9302325581395, Blast_Score=222, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17532491, Length=368, Percent_Identity=24.1847826086957, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324990, Length=422, Percent_Identity=33.4123222748815, Blast_Score=189, Evalue=6e-49,
Organism=Saccharomyces cerevisiae, GI6324061, Length=508, Percent_Identity=27.5590551181102, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6320772, Length=460, Percent_Identity=28.0434782608696, Blast_Score=171, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6324553, Length=396, Percent_Identity=32.0707070707071, Blast_Score=170, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6321629, Length=430, Percent_Identity=28.8372093023256, Blast_Score=166, Evalue=7e-42,
Organism=Saccharomyces cerevisiae, GI6324059, Length=468, Percent_Identity=30.7692307692308, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6324924, Length=416, Percent_Identity=30.7692307692308, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6321053, Length=437, Percent_Identity=27.9176201372998, Blast_Score=152, Evalue=9e-38,
Organism=Saccharomyces cerevisiae, GI6320251, Length=419, Percent_Identity=26.2529832935561, Blast_Score=149, Evalue=9e-37,
Organism=Saccharomyces cerevisiae, GI6319824, Length=433, Percent_Identity=27.4826789838337, Blast_Score=147, Evalue=4e-36,
Organism=Saccharomyces cerevisiae, GI6322892, Length=436, Percent_Identity=29.5871559633028, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320717, Length=423, Percent_Identity=27.1867612293144, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6322967, Length=428, Percent_Identity=29.2056074766355, Blast_Score=143, Evalue=5e-35,
Organism=Saccharomyces cerevisiae, GI6319543, Length=420, Percent_Identity=25.7142857142857, Blast_Score=140, Evalue=5e-34,
Organism=Saccharomyces cerevisiae, GI6319542, Length=410, Percent_Identity=26.3414634146341, Blast_Score=139, Evalue=7e-34,
Organism=Saccharomyces cerevisiae, GI6324981, Length=416, Percent_Identity=29.3269230769231, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6319608, Length=458, Percent_Identity=24.6724890829694, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6320364, Length=521, Percent_Identity=23.0326295585413, Blast_Score=84, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 51182; Mature: 51051

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSERQFQAIAQREGGLRRTLSARQMTMIAIGGAIGTGLFLGSGFAIGFAGPSVLISYAI
CCCHHHHHHHHHHCCCHHHHHHHHHEEHEEECHHHHHHHHHCCCCEEECCCHHHHHHHHH
GALISLLLMGCLAEMTVAHPTSGSFGAHAEHYLGPWAGFLVRYAYWACIVLAVGTEVTAV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH
ALYMKYWLPAVPGWVWIAGFSAVLVFVNALSVDVFGSVEYGFSVVKIAAIVAFIAIGGYV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCEE
VFVDPSLVADPNAGAPGLRHYFGHGGFFPKGLWGTWVAVIVSIFSYLSIEMIAVAAGEAQ
EEECCCEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCC
DPERAVTRAFRSTVIRLVLFYLVTLALMLAIVPWTAAGRDESPFVKVMIAIHLPGAAGVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCHHHHH
NFVVLIAALSAMNSQLYITTRMMFSLACAGHAPRGLGRLTRRGVPLNALLLSTAGIAIAT
HHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
LVSIAYPDASFTIMMAISMFGAMFTWTMIFVTHYFFRRKRAAQGLPPPRFRMPGFPLATL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
AGAALMLAIMATTYFTPEFHMTLVFGAPFLAALSVLYFARYRRRPHALARAESQPR
HHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure 
SSERQFQAIAQREGGLRRTLSARQMTMIAIGGAIGTGLFLGSGFAIGFAGPSVLISYAI
CCHHHHHHHHHHCCCHHHHHHHHHEEHEEECHHHHHHHHHCCCCEEECCCHHHHHHHHH
GALISLLLMGCLAEMTVAHPTSGSFGAHAEHYLGPWAGFLVRYAYWACIVLAVGTEVTAV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH
ALYMKYWLPAVPGWVWIAGFSAVLVFVNALSVDVFGSVEYGFSVVKIAAIVAFIAIGGYV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCEE
VFVDPSLVADPNAGAPGLRHYFGHGGFFPKGLWGTWVAVIVSIFSYLSIEMIAVAAGEAQ
EEECCCEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCC
DPERAVTRAFRSTVIRLVLFYLVTLALMLAIVPWTAAGRDESPFVKVMIAIHLPGAAGVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCHHHHH
NFVVLIAALSAMNSQLYITTRMMFSLACAGHAPRGLGRLTRRGVPLNALLLSTAGIAIAT
HHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
LVSIAYPDASFTIMMAISMFGAMFTWTMIFVTHYFFRRKRAAQGLPPPRFRMPGFPLATL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
AGAALMLAIMATTYFTPEFHMTLVFGAPFLAALSVLYFARYRRRPHALARAESQPR
HHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]