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The map label for this gene is andR [H]

Identifier: 76818500

GI number: 76818500

Start: 1248494

End: 1249711

Strand: Direct

Name: andR [H]

Synonym: BURPS1710b_A0984

Alternate gene names: 76818500

Gene position: 1248494-1249711 (Clockwise)

Preceding gene: 76818434

Following gene: 76819331

Centisome position: 39.24

GC content: 70.2

Gene sequence:

>1218_bases
ATGGTCTCCTGTCGGTCGGAGCGGACGCCCGCTCCGATCCCATGCAAGTTGCTGCGGTTGAGGCGCTGGACAATCCGCCT
GACGAGACCGATTTTTGAAACGCTAGAATTCGCCGTCTATCCGGAAAGTGCGGTTGCGGCGGCGCAGTATCCACTTCCGG
CGGATTTCCGCGTTACGATGCGCGCATCAGACATGCCGCCCGGCCGACGAACGATGTTCAGGACGCCGGCGCTTTGTGCG
AGGCAGACGATCATGCCCCCGACCCCATTCGATCCGCTCGCGTTGCGCGAGCACCGGCTGTTCGAATCGCGCGACCTCGA
CGAGACGCGCGAGCGGATCTCGCGCGTGATGCAGCCGCATGCGCTGTTGCCGGACGGCTCGCGGCACGGGCCGTCGCACA
TGGATTACGTGCGCCTCGGCGGGCTCGGCATCGGAACCATCGCGTTCGGCGACGCGATGCGGGTGCATCTCGATGCGGTG
GACGGCTATCATCTGCTGATGTTTTGTCTGACGGGTTCCGCGCAGGTCCGCACGATGGGCCGCGCGTTCGACGTCGACGC
GCACACGGGCGTGCTGTGCGCGCCGGGCGAGCCGTTCGACGCGCACCTGTCGCGCGATTGCGAGCAGTTCGTCCTCCGTA
TCGATGCGGCGACCCTCGCCGCGCACGCGGGCGACGCGGCGGCGGCGCTCGATCCCGTGATCGGCATCGACGATTCGGCG
CTGAGCGCGTGGATGCAGCAACTGCAGCTCGTCGCGCGCTCGCCGGAGCTGCTCGCGAGCGCAAGCGCGAACCCGCGCGT
CGCGACGCGGCTCGAACAGTTGCTGCTCGATCTGCTGATCGACGGGCATCCGCCCGCCGCGCCGCCCGCGCGGCGCGCCG
ATCCGGCGCCAGGCTTCGTGCGGCGCGCGCAGGAGTTCATCGGCGCGCAGCTCGCCCAGCCGCTGCAGCTCGCCGACATC
GCGCAGGCCGCGGGCGTACCCGAGCGCACGCTGCGCGACGGCTTCCTGCAGTTTCGCGGGACGAGCCCGATGCAATACCT
GCGCCAGCGGCGCCTCGAGCGCGCGCGCGAGCTGCTGCGCACGGCCGCGCCCGAGCGCCGGATCGCCGAGATCGCGCTCG
ATTGCGGTTTCGCGCACTTCGGCCGCTTCGCGATCGCCTACCGCGAACGGTTCGGCGAGCTGCCGTCCGCGACGCTCGCC
GATCGGCGCGACGCCTGA

Upstream 100 bases:

>100_bases
CACCTTGTACGGCACGCGCGAGCCGTCGTCGCGCGGAAAGCGCACGTCGGACGAATCGGCGCGATCGATCAGCGCCACCG
GCGATTCGGTCATTTCCATC

Downstream 100 bases:

>100_bases
TTCCTTCGTTCTCCTTTCGCCTCACGCCCGCCGGAGCGCGCGGCATGCTGCATGCCGCGCGCGGCACGCGTCAGTGGCCC
GCCATCAGTTCGCGCGCGAG

Product: AndR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MVSCRSERTPAPIPCKLLRLRRWTIRLTRPIFETLEFAVYPESAVAAAQYPLPADFRVTMRASDMPPGRRTMFRTPALCA
RQTIMPPTPFDPLALREHRLFESRDLDETRERISRVMQPHALLPDGSRHGPSHMDYVRLGGLGIGTIAFGDAMRVHLDAV
DGYHLLMFCLTGSAQVRTMGRAFDVDAHTGVLCAPGEPFDAHLSRDCEQFVLRIDAATLAAHAGDAAAALDPVIGIDDSA
LSAWMQQLQLVARSPELLASASANPRVATRLEQLLLDLLIDGHPPAAPPARRADPAPGFVRRAQEFIGAQLAQPLQLADI
AQAAGVPERTLRDGFLQFRGTSPMQYLRQRRLERARELLRTAAPERRIAEIALDCGFAHFGRFAIAYRERFGELPSATLA
DRRDA

Sequences:

>Translated_405_residues
MVSCRSERTPAPIPCKLLRLRRWTIRLTRPIFETLEFAVYPESAVAAAQYPLPADFRVTMRASDMPPGRRTMFRTPALCA
RQTIMPPTPFDPLALREHRLFESRDLDETRERISRVMQPHALLPDGSRHGPSHMDYVRLGGLGIGTIAFGDAMRVHLDAV
DGYHLLMFCLTGSAQVRTMGRAFDVDAHTGVLCAPGEPFDAHLSRDCEQFVLRIDAATLAAHAGDAAAALDPVIGIDDSA
LSAWMQQLQLVARSPELLASASANPRVATRLEQLLLDLLIDGHPPAAPPARRADPAPGFVRRAQEFIGAQLAQPLQLADI
AQAAGVPERTLRDGFLQFRGTSPMQYLRQRRLERARELLRTAAPERRIAEIALDCGFAHFGRFAIAYRERFGELPSATLA
DRRDA
>Mature_405_residues
MVSCRSERTPAPIPCKLLRLRRWTIRLTRPIFETLEFAVYPESAVAAAQYPLPADFRVTMRASDMPPGRRTMFRTPALCA
RQTIMPPTPFDPLALREHRLFESRDLDETRERISRVMQPHALLPDGSRHGPSHMDYVRLGGLGIGTIAFGDAMRVHLDAV
DGYHLLMFCLTGSAQVRTMGRAFDVDAHTGVLCAPGEPFDAHLSRDCEQFVLRIDAATLAAHAGDAAAALDPVIGIDDSA
LSAWMQQLQLVARSPELLASASANPRVATRLEQLLLDLLIDGHPPAAPPARRADPAPGFVRRAQEFIGAQLAQPLQLADI
AQAAGVPERTLRDGFLQFRGTSPMQYLRQRRLERARELLRTAAPERRIAEIALDCGFAHFGRFAIAYRERFGELPSATLA
DRRDA

Specific function: Regulatory protein of the TOL plasmid xyl operons. XylS activates the xylXYZLTEGFJQKIH operon required for the degradation of toluene, m-xylene and p-xylene [H]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788778, Length=166, Percent_Identity=26.5060240963855, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: PF02311 AraC_binding; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 44819; Mature: 44819

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSCRSERTPAPIPCKLLRLRRWTIRLTRPIFETLEFAVYPESAVAAAQYPLPADFRVTM
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEE
RASDMPPGRRTMFRTPALCARQTIMPPTPFDPLALREHRLFESRDLDETRERISRVMQPH
EECCCCCCCHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
ALLPDGSRHGPSHMDYVRLGGLGIGTIAFGDAMRVHLDAVDGYHLLMFCLTGSAQVRTMG
CCCCCCCCCCCCCCCEEEECCCEEEHHHHCCCEEEEEECCCHHHHHHHHHCCCHHHHHCC
RAFDVDAHTGVLCAPGEPFDAHLSRDCEQFVLRIDAATLAAHAGDAAAALDPVIGIDDSA
CEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHH
LSAWMQQLQLVARSPELLASASANPRVATRLEQLLLDLLIDGHPPAAPPARRADPAPGFV
HHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
RRAQEFIGAQLAQPLQLADIAQAAGVPERTLRDGFLQFRGTSPMQYLRQRRLERARELLR
HHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TAAPERRIAEIALDCGFAHFGRFAIAYRERFGELPSATLADRRDA
HCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHCCCCC
>Mature Secondary Structure
MVSCRSERTPAPIPCKLLRLRRWTIRLTRPIFETLEFAVYPESAVAAAQYPLPADFRVTM
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEE
RASDMPPGRRTMFRTPALCARQTIMPPTPFDPLALREHRLFESRDLDETRERISRVMQPH
EECCCCCCCHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
ALLPDGSRHGPSHMDYVRLGGLGIGTIAFGDAMRVHLDAVDGYHLLMFCLTGSAQVRTMG
CCCCCCCCCCCCCCCEEEECCCEEEHHHHCCCEEEEEECCCHHHHHHHHHCCCHHHHHCC
RAFDVDAHTGVLCAPGEPFDAHLSRDCEQFVLRIDAATLAAHAGDAAAALDPVIGIDDSA
CEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHH
LSAWMQQLQLVARSPELLASASANPRVATRLEQLLLDLLIDGHPPAAPPARRADPAPGFV
HHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
RRAQEFIGAQLAQPLQLADIAQAAGVPERTLRDGFLQFRGTSPMQYLRQRRLERARELLR
HHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TAAPERRIAEIALDCGFAHFGRFAIAYRERFGELPSATLADRRDA
HCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8473862 [H]