| Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_007435 |
| Length | 3,181,762 |
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The map label for this gene is hyi [C]
Identifier: 76818127
GI number: 76818127
Start: 611864
End: 612640
Strand: Direct
Name: hyi [C]
Synonym: BURPS1710b_A0442
Alternate gene names: 76818127
Gene position: 611864-612640 (Clockwise)
Preceding gene: 76819755
Following gene: 76817720
Centisome position: 19.23
GC content: 68.21
Gene sequence:
>777_bases ATGCCGCGCTTCGCCGCCAATCTCACGATGATGTACAACGAGCACGCGTTCCTCGAGCGCTTCGCCGCCGCGGCACGCGA CGGCTTCAAGGCGGTCGAGTACCTGTTCCCGTACGAGTTCCCCGCCGCCGAGCTCAAGGCGCGCCTCGACGCGCATGGCC TCGTGCAGGCGCTGTTCAACGCGCCGCCCGGCGACTGGGCGGCGGGCGAGCGCGGAATCGCGTCGCTGCCGGGCCGCGAG GACGAGTTCAGGCGCGCGATCGACACCGCGCTCGACTACGCGCGCGTGATCGGCAACGACACGCTCCACGTGATGGCGGG CCTGATCGCGCCGACGCAGGATCGCGCGCGGCATCGCGACGTGTATCTGCGCAACCTCGCGCACGCGGCCGAAGCGGCGC GCGCGCAGAACGTGACGATCGTGATCGAGCCGATCAACCCGCGCGACATGCCGGGCTTCTTCCTGAACCGCCAGGACGAC GCGCAGGCGATCTGCCGCGAAGTCGGCGCGCCGAACCTGCTGGTGCAGTTCGACTGCTATCACTGCCAGATCGTCGAAGG CGATCTGGCGATGAAATTGAAGCGCGACATCGCGGGCATCGGCCACATCCAGATCGCGGGCGTGCCGCAGCGTCACGAGC CGGACGTCGGCGAAATCCACTATCCGTACCTGTTCGAGCTGATCGACGTGCTCGGCTACGACGGCTGGATCGGCTGCGAG TATCGGCCGAAGGCCGGCACCTCCGAGGGCCTCGGCTGGCTCGCACCGTATCTGTAA
Upstream 100 bases:
>100_bases GAAGCTCGTCAACCGATAGATAATCGACCGTCGGCGGCGCCGCGCGCGTTCGGGCGCGCCCTCGCCGCCCCTTTCACCCA CCGGACCTGGAACCGACGCC
Downstream 100 bases:
>100_bases CCCCACGTTCTCACGAGGCACATTGCGATGAAGGTTCTCATCACCGGCGGCGCCGGCTTTCTCGGCCAGCGTCTCGCGAA ACAGCTGCTCGCGCGCGGCG
Product: hydroxypyruvate isomerase
Products: 2-hydroxy-3-oxopropanoate
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPRFAANLTMMYNEHAFLERFAAAARDGFKAVEYLFPYEFPAAELKARLDAHGLVQALFNAPPGDWAAGERGIASLPGRE DEFRRAIDTALDYARVIGNDTLHVMAGLIAPTQDRARHRDVYLRNLAHAAEAARAQNVTIVIEPINPRDMPGFFLNRQDD AQAICREVGAPNLLVQFDCYHCQIVEGDLAMKLKRDIAGIGHIQIAGVPQRHEPDVGEIHYPYLFELIDVLGYDGWIGCE YRPKAGTSEGLGWLAPYL
Sequences:
>Translated_258_residues MPRFAANLTMMYNEHAFLERFAAAARDGFKAVEYLFPYEFPAAELKARLDAHGLVQALFNAPPGDWAAGERGIASLPGRE DEFRRAIDTALDYARVIGNDTLHVMAGLIAPTQDRARHRDVYLRNLAHAAEAARAQNVTIVIEPINPRDMPGFFLNRQDD AQAICREVGAPNLLVQFDCYHCQIVEGDLAMKLKRDIAGIGHIQIAGVPQRHEPDVGEIHYPYLFELIDVLGYDGWIGCE YRPKAGTSEGLGWLAPYL >Mature_257_residues PRFAANLTMMYNEHAFLERFAAAARDGFKAVEYLFPYEFPAAELKARLDAHGLVQALFNAPPGDWAAGERGIASLPGRED EFRRAIDTALDYARVIGNDTLHVMAGLIAPTQDRARHRDVYLRNLAHAAEAARAQNVTIVIEPINPRDMPGFFLNRQDDA QAICREVGAPNLLVQFDCYHCQIVEGDLAMKLKRDIAGIGHIQIAGVPQRHEPDVGEIHYPYLFELIDVLGYDGWIGCEY RPKAGTSEGLGWLAPYL
Specific function: Unknown
COG id: COG3622
COG function: function code G; Hydroxypyruvate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hyi family [H]
Homologues:
Organism=Homo sapiens, GI300068962, Length=262, Percent_Identity=40.4580152671756, Blast_Score=195, Evalue=3e-50, Organism=Homo sapiens, GI300068964, Length=243, Percent_Identity=39.0946502057613, Blast_Score=170, Evalue=1e-42, Organism=Escherichia coli, GI1789095, Length=255, Percent_Identity=48.2352941176471, Blast_Score=247, Evalue=4e-67, Organism=Escherichia coli, GI1786718, Length=257, Percent_Identity=43.9688715953307, Blast_Score=235, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17552022, Length=240, Percent_Identity=38.75, Blast_Score=176, Evalue=1e-44, Organism=Drosophila melanogaster, GI17530883, Length=257, Percent_Identity=39.6887159533074, Blast_Score=183, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: 5.3.1.22
Molecular weight: Translated: 28761; Mature: 28630
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFAANLTMMYNEHAFLERFAAAARDGFKAVEYLFPYEFPAAELKARLDAHGLVQALFN CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC APPGDWAAGERGIASLPGREDEFRRAIDTALDYARVIGNDTLHVMAGLIAPTQDRARHRD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH VYLRNLAHAAEAARAQNVTIVIEPINPRDMPGFFLNRQDDAQAICREVGAPNLLVQFDCY HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECE HCQIVEGDLAMKLKRDIAGIGHIQIAGVPQRHEPDVGEIHYPYLFELIDVLGYDGWIGCE EEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCE YRPKAGTSEGLGWLAPYL ECCCCCCCCCCCHHCCCC >Mature Secondary Structure PRFAANLTMMYNEHAFLERFAAAARDGFKAVEYLFPYEFPAAELKARLDAHGLVQALFN CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC APPGDWAAGERGIASLPGREDEFRRAIDTALDYARVIGNDTLHVMAGLIAPTQDRARHRD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH VYLRNLAHAAEAARAQNVTIVIEPINPRDMPGFFLNRQDDAQAICREVGAPNLLVQFDCY HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECE HCQIVEGDLAMKLKRDIAGIGHIQIAGVPQRHEPDVGEIHYPYLFELIDVLGYDGWIGCE EEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCE YRPKAGTSEGLGWLAPYL ECCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: hydroxypyruvate
Specific reaction: hydroxypyruvate = 2-hydroxy-3-oxopropanoate; Other Name(s): hydroxypyruvate ketol-isomerase
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]