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The map label for this gene is ycjP [C]

Identifier: 76817653

GI number: 76817653

Start: 347723

End: 348535

Strand: Direct

Name: ycjP [C]

Synonym: BURPS1710b_A0232

Alternate gene names: 76817653

Gene position: 347723-348535 (Clockwise)

Preceding gene: 76819255

Following gene: 76818471

Centisome position: 10.93

GC content: 68.88

Gene sequence:

>813_bases
ATGGGACGACTGATCGCACGCGGCGGCACCGTCGCCATCGGCGGCGCGATCGCGCTCGTCGCCGTGTTTCCGCTCGCGTG
GGCGCTCCTCAATTCGTTCAAGCGCCTGCTCGACATCGTCACGCCGACGCCGCGCTTCATCTTCACGCCGACGCTCGACA
ACTACCGGCAGGTGCTGTCGAGCCCCGAGGTGCTGATCGGCCTCGGCAACAGCGTCGCGATCGTCGGCGCGGCCGTCGCG
CTCGGCGCCGCGCTGGGCGTGCCCGCCGCGTACGCGATCGTCCGCTATCCGGTGCGCGGCAAGCGCGACATCCAGTTCTT
CCTGCTGTCGCTGCGCTTCTTGCCGCCCGTCGCGGTCGCGATTCCGCTGATCGCGATCTGGGTCGACCTCGGGCTCTACG
ACACGAAGCTGTCGATGATCGTCACGTACCTGCTCGTCACGCTGTCGACGATCACATGGCTGTCGATCCCCGTGTTCCGC
CGGCTGCCGCGCGAAATCGAGGAGGCGGCCGCGCTCGACGGCTACGGGCCGTACGCGGTGTTCTGGCGCGTCGCGCTGCC
GGTCTGCGCGAGCACGCTGCTCGGCGGCATCGTGTTCAGCTTCGTGCTCGTCTGGAACGAACTGATGATCGCGCTCGCGC
TCACGTCGTCGCGCGCGGCGACGCTGCCCGTCGTCGCGTCCGCGTTCACGTCGCTCGGCCAGGAGGTGCCGTGGGGCGTG
ATCAATGCGTCCACCGTGCTGCTCGCGCTGCCGCCGCTCGTCTTCGTCGGCATGCTCAGCCGCCTGCTGAACTCGATGCT
CAAAGGCCGATAG

Upstream 100 bases:

>100_bases
TCGGGCTGTCGGGCAAGGTGTCGTACGCGTCGAGCATGGCGGTGCTGATGATGGTCGCGACGACGCTCGTGTTCACGTTC
ATCTGGAAGCGGGTCGACAA

Downstream 100 bases:

>100_bases
TCGGCCGCCAAGGAGAATCCGTTGAAAGCCCTCGTACTCGAAAAGGCGCGCGAGCTCGCGCTGCGCGACATCGATCTGCC
GCTCGAGGTCGGCCCCGCCG

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MGRLIARGGTVAIGGAIALVAVFPLAWALLNSFKRLLDIVTPTPRFIFTPTLDNYRQVLSSPEVLIGLGNSVAIVGAAVA
LGAALGVPAAYAIVRYPVRGKRDIQFFLLSLRFLPPVAVAIPLIAIWVDLGLYDTKLSMIVTYLLVTLSTITWLSIPVFR
RLPREIEEAAALDGYGPYAVFWRVALPVCASTLLGGIVFSFVLVWNELMIALALTSSRAATLPVVASAFTSLGQEVPWGV
INASTVLLALPPLVFVGMLSRLLNSMLKGR

Sequences:

>Translated_270_residues
MGRLIARGGTVAIGGAIALVAVFPLAWALLNSFKRLLDIVTPTPRFIFTPTLDNYRQVLSSPEVLIGLGNSVAIVGAAVA
LGAALGVPAAYAIVRYPVRGKRDIQFFLLSLRFLPPVAVAIPLIAIWVDLGLYDTKLSMIVTYLLVTLSTITWLSIPVFR
RLPREIEEAAALDGYGPYAVFWRVALPVCASTLLGGIVFSFVLVWNELMIALALTSSRAATLPVVASAFTSLGQEVPWGV
INASTVLLALPPLVFVGMLSRLLNSMLKGR
>Mature_269_residues
GRLIARGGTVAIGGAIALVAVFPLAWALLNSFKRLLDIVTPTPRFIFTPTLDNYRQVLSSPEVLIGLGNSVAIVGAAVAL
GAALGVPAAYAIVRYPVRGKRDIQFFLLSLRFLPPVAVAIPLIAIWVDLGLYDTKLSMIVTYLLVTLSTITWLSIPVFRR
LPREIEEAAALDGYGPYAVFWRVALPVCASTLLGGIVFSFVLVWNELMIALALTSSRAATLPVVASAFTSLGQEVPWGVI
NASTVLLALPPLVFVGMLSRLLNSMLKGR

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=268, Percent_Identity=26.865671641791, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28930; Mature: 28799

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLIARGGTVAIGGAIALVAVFPLAWALLNSFKRLLDIVTPTPRFIFTPTLDNYRQVLS
CCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHC
SPEVLIGLGNSVAIVGAAVALGAALGVPAAYAIVRYPVRGKRDIQFFLLSLRFLPPVAVA
CCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHH
IPLIAIWVDLGLYDTKLSMIVTYLLVTLSTITWLSIPVFRRLPREIEEAAALDGYGPYAV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FWRVALPVCASTLLGGIVFSFVLVWNELMIALALTSSRAATLPVVASAFTSLGQEVPWGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCH
INASTVLLALPPLVFVGMLSRLLNSMLKGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRLIARGGTVAIGGAIALVAVFPLAWALLNSFKRLLDIVTPTPRFIFTPTLDNYRQVLS
CCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHC
SPEVLIGLGNSVAIVGAAVALGAALGVPAAYAIVRYPVRGKRDIQFFLLSLRFLPPVAVA
CCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHH
IPLIAIWVDLGLYDTKLSMIVTYLLVTLSTITWLSIPVFRRLPREIEEAAALDGYGPYAV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FWRVALPVCASTLLGGIVFSFVLVWNELMIALALTSSRAATLPVVASAFTSLGQEVPWGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCH
INASTVLLALPPLVFVGMLSRLLNSMLKGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]