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The map label for this gene is phaZ

Identifier: 76817511

GI number: 76817511

Start: 1731790

End: 1733061

Strand: Direct

Name: phaZ

Synonym: BURPS1710b_A1421

Alternate gene names: NA

Gene position: 1731790-1733061 (Clockwise)

Preceding gene: 76817588

Following gene: 76818060

Centisome position: 54.43

GC content: 73.98

Gene sequence:

>1272_bases
ATGCTGTACGCGTGGCTCGAAGCGCAACGTGAATTCTTCCGCGCATGCCAGCCGTGGGCGGGCGCCGCGCAGCGCGCGGG
CGCGGGCGCGGGCGCGCGCCCGGCCGGCTGGCCGACATGGGGCCCGATGGCGCGCGCGGCCGATGCCGTTCCCGCGCCGC
CGCCGTTCGCGATCGCGTCGATCGAGATCGACGGCGCGGCCGTGCCGGTCGATGAGTGCGTCGTCGACGACACGCCGTTC
TGCGCGCTGCGCAAGTTCTCCCGCCGGCTACGCGGCGACGCGGCCGCGCGCCCCGCGGTCTTTCTGTGCACGCCGCTCGC
CGGCCACCATGCGGTGATGCTGCGCGAGACCGTCGAGACGATACTCGCGACGCGCGACGTCTACGTGACCGACTGGCGCA
ACGCGCGCGACGTCCCGCCCGAAGCCGGCGCGTTCGGCCTCGACGACTACGTGTGCACGCTCGAGCGCTTCGTCGCCGGC
GCGGCCGGCGACGGGCTGCACATGATGGCGGTCTGCCAGGCGACGGTGCCCGCGCTCGCGGCCGTCGCGCTGCTCGCGGC
GCGCGACGTGCATGTCACGAGCGTCGCGCTGCTCGGCGGCCCCGTCGACACGCGCTCGCACCCCACGCTTATCGATCGCT
TCGCGCTCGAACACGACCTCGACTGGTTCCGCCGCACGGCGATCGACATCGTGCCGCCGCCGTACGCCGGCGCGGGGCGG
CGCGTCTATCCGGGCTTCATCCAGCATGCGGCGATCATCGTCGCGCATCCGCAGCGGCGCGCGTCGCTCGAGAGCCGCTA
CTGGGCCGCATGGATGACGGGCGACTTCGCGGCCGCCGCGCGGTGCCTACGCGAGATGAACGAATACGGCGCGGTGCTCG
ACATGACCGAGCGCTATTTCCTCGATACGATTCGCGTGATCTTCCACGAGCGGCTGCTCGCGCAGGGGCGCTGGTCGATC
GGCCGCCGCCTCGTCGCGCCGCAGCGGCTCACGCGCACCGCGCTCTGCACGATCGAGGGCGGCCGCGACGACATCGCCGG
CGCCGGCCAGACGCACGCGGCGCACGCACTATGCGACGCGGTGCCCGACGCCGTGCGCGAGCGGATCACCGAGCCGGACT
GCGATCACTACGACCTCTTCCTCGGCCCGCGCTGGCGGCGCACGATCCATCCGGCGCTCGACGCATTCTGGACGCGCGCG
GAAGCGGCGCGTGCCGCAGCCGGCGAGCCGCGGCCCACCGCCGAGCGTGCGGAGCGCCGCATCGCGCACTGA

Upstream 100 bases:

>100_bases
CCACGCGCCAACGGCCCGCCCACGGCCGCCCGCGCGGCGCATGCCGCATGCGCCACGACGGCCGCGATGATGCGTCCCCA
TACGCCCGCAAGGAGATCCG

Downstream 100 bases:

>100_bases
GCCGCCCCCGGCACCATCCGCGAAGCCGCGCAACGCGCCGCTCGCCGCGCTGCCCGTCATGCCGCTCGCCGCGCCGCTCG
CCGCACCACCCGCCATGTCG

Product: intracellular polyhydroxyalkanoate depolymerase

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly(3-Hydroxybutyrate) Depolymerase; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MLYAWLEAQREFFRACQPWAGAAQRAGAGAGARPAGWPTWGPMARAADAVPAPPPFAIASIEIDGAAVPVDECVVDDTPF
CALRKFSRRLRGDAAARPAVFLCTPLAGHHAVMLRETVETILATRDVYVTDWRNARDVPPEAGAFGLDDYVCTLERFVAG
AAGDGLHMMAVCQATVPALAAVALLAARDVHVTSVALLGGPVDTRSHPTLIDRFALEHDLDWFRRTAIDIVPPPYAGAGR
RVYPGFIQHAAIIVAHPQRRASLESRYWAAWMTGDFAAAARCLREMNEYGAVLDMTERYFLDTIRVIFHERLLAQGRWSI
GRRLVAPQRLTRTALCTIEGGRDDIAGAGQTHAAHALCDAVPDAVRERITEPDCDHYDLFLGPRWRRTIHPALDAFWTRA
EAARAAAGEPRPTAERAERRIAH

Sequences:

>Translated_423_residues
MLYAWLEAQREFFRACQPWAGAAQRAGAGAGARPAGWPTWGPMARAADAVPAPPPFAIASIEIDGAAVPVDECVVDDTPF
CALRKFSRRLRGDAAARPAVFLCTPLAGHHAVMLRETVETILATRDVYVTDWRNARDVPPEAGAFGLDDYVCTLERFVAG
AAGDGLHMMAVCQATVPALAAVALLAARDVHVTSVALLGGPVDTRSHPTLIDRFALEHDLDWFRRTAIDIVPPPYAGAGR
RVYPGFIQHAAIIVAHPQRRASLESRYWAAWMTGDFAAAARCLREMNEYGAVLDMTERYFLDTIRVIFHERLLAQGRWSI
GRRLVAPQRLTRTALCTIEGGRDDIAGAGQTHAAHALCDAVPDAVRERITEPDCDHYDLFLGPRWRRTIHPALDAFWTRA
EAARAAAGEPRPTAERAERRIAH
>Mature_423_residues
MLYAWLEAQREFFRACQPWAGAAQRAGAGAGARPAGWPTWGPMARAADAVPAPPPFAIASIEIDGAAVPVDECVVDDTPF
CALRKFSRRLRGDAAARPAVFLCTPLAGHHAVMLRETVETILATRDVYVTDWRNARDVPPEAGAFGLDDYVCTLERFVAG
AAGDGLHMMAVCQATVPALAAVALLAARDVHVTSVALLGGPVDTRSHPTLIDRFALEHDLDWFRRTAIDIVPPPYAGAGR
RVYPGFIQHAAIIVAHPQRRASLESRYWAAWMTGDFAAAARCLREMNEYGAVLDMTERYFLDTIRVIFHERLLAQGRWSI
GRRLVAPQRLTRTALCTIEGGRDDIAGAGQTHAAHALCDAVPDAVRERITEPDCDHYDLFLGPRWRRTIHPALDAFWTRA
EAARAAAGEPRPTAERAERRIAH

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46346; Mature: 46346

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYAWLEAQREFFRACQPWAGAAQRAGAGAGARPAGWPTWGPMARAADAVPAPPPFAIAS
CEEHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEE
IEIDGAAVPVDECVVDDTPFCALRKFSRRLRGDAAARPAVFLCTPLAGHHAVMLRETVET
EEECCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
ILATRDVYVTDWRNARDVPPEAGAFGLDDYVCTLERFVAGAAGDGLHMMAVCQATVPALA
HHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AVALLAARDVHVTSVALLGGPVDTRSHPTLIDRFALEHDLDWFRRTAIDIVPPPYAGAGR
HHHHHHHCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RVYPGFIQHAAIIVAHPQRRASLESRYWAAWMTGDFAAAARCLREMNEYGAVLDMTERYF
CCCCHHHHHCEEEEECCHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHH
LDTIRVIFHERLLAQGRWSIGRRLVAPQRLTRTALCTIEGGRDDIAGAGQTHAAHALCDA
HHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHH
VPDAVRERITEPDCDHYDLFLGPRWRRTIHPALDAFWTRAEAARAAAGEPRPTAERAERR
HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IAH
CCC
>Mature Secondary Structure
MLYAWLEAQREFFRACQPWAGAAQRAGAGAGARPAGWPTWGPMARAADAVPAPPPFAIAS
CEEHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEE
IEIDGAAVPVDECVVDDTPFCALRKFSRRLRGDAAARPAVFLCTPLAGHHAVMLRETVET
EEECCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
ILATRDVYVTDWRNARDVPPEAGAFGLDDYVCTLERFVAGAAGDGLHMMAVCQATVPALA
HHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AVALLAARDVHVTSVALLGGPVDTRSHPTLIDRFALEHDLDWFRRTAIDIVPPPYAGAGR
HHHHHHHCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RVYPGFIQHAAIIVAHPQRRASLESRYWAAWMTGDFAAAARCLREMNEYGAVLDMTERYF
CCCCHHHHHCEEEEECCHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHH
LDTIRVIFHERLLAQGRWSIGRRLVAPQRLTRTALCTIEGGRDDIAGAGQTHAAHALCDA
HHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHH
VPDAVRERITEPDCDHYDLFLGPRWRRTIHPALDAFWTRAEAARAAAGEPRPTAERAERR
HHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IAH
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA