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The map label for this gene is tnsD [H]

Identifier: 75909701

GI number: 75909701

Start: 4335160

End: 4337070

Strand: Direct

Name: tnsD [H]

Synonym: Ava_3495

Alternate gene names: 75909701

Gene position: 4335160-4337070 (Clockwise)

Preceding gene: 75909699

Following gene: 75909704

Centisome position: 68.1

GC content: 39.14

Gene sequence:

>1911_bases
ATGGTGAGTTTTTTCCCTCAACCTTATCCAGATGAAATTTTATATAGTGTTATTGCTCGTTATCACATTAGAAGTGGCAA
TACGAGTCCAAAAATTACATTACAAGATTTATTTAAGTCACAGACTACTGTGGCGACAGTAGATTTACCATCGAACCTTA
GTAATTTAATTAAAAACCTACAATTTATCTCAAATTACCAAGTTGAAGAGTTGATATATAAACATACTCTCTACCCTTTA
TATAGCCCTTTTTTGCCAGCAAACAGGTCTAGTCAGGTACTGGAATCTATGAAAGGAGATTATGGGGGAGATATTCATAC
AAGAGCCGGAATTATGGCAAGCTCAATTACTATGCCGAAATATTTGCGGTTTTGTCCAACTTGCTGGGAAGAAGACTTAA
AAAATTATGGCGAACCTTACTGGCATCGCATCCATCAAATACCAGGGATTTTAGTTTGTCCATTTCATGGTGAAGTTTTG
CAAGATAGCCTAGCTCCTTTACATGGTTTTAATAAGCATGAATATTATGCAGCTAGTACAGACAACTGTTCTATTACTAA
AGAACCCAGTATTCTTAGCCCTGACACACTGAAAAAATTACTAATATTAGCCAAAGATTTTTGGTGGTTACTCAATAGTG
AAATACCTTGCCAAGAGCCACAGTGGTTTCGCAAACAGTACACAAATCTGATGATTGAGCAGGGTTTTGCAACTCCAACT
GGTCGAATTTACCAGAACAAACTACTAGATAATTTTTTGTTCTTTTATGGTCAAGAAATGCTCAGTGCTGTTGATTCAAT
GGTAAATCATAATGATTCAAACAACTGGGTTACTAGCATCGTCAGGAAATATAGGAAATCTTTCCATCCTCTTAGACATC
TGCTAATGATGCGTTTTTTGAAAACATCAGTAGAGGAATTTTTTCAAAAAGATACTGAATACAAGCCTTTTGGCGAACCC
CCCTGGTTGTGTCTCAATGCTGCCGCAGAACATTATCTACAACCAGTGATTACCAATTTAGTCATTACTTTATGCTGCGA
TACAAAAAAGCCTGTCGGTACTTTTTCTTGTGCTTGCGGAATGGTTTATTGCCGGACTGGGCCTGATGAAACGGATGAAG
ACAAAGTTCGCATTGGTAAAGTCAAGGCATTCGGTCAAATATGGGAGCAAAAGCTGAAAGAATTGGTGGAAGTTGAAAAG
TTGGGTTTGCGGGAGACAGCCAGAAGATTAAATGTTGATGCCAGAACTATCAAACGTTATGTATCTCGTCTAAAATTGAC
AACTTATTGGCAGACTAGAACAGAAAATGACTCTGTAGGCTTACAGGGAGTCCCAGAAATAGATCCCAATTTTGCAACTG
AACTCAAATTAAAACACAGGCAAAATTGGATGGCTTTACAAGTACAGAACCCTGAAGCTTCAAAGACAACTCTGAGAAAA
CTAGTACCAGCCACCTATATTTGGCTATACAGGAATGACAGAGAATGGCTCAATCAAAACTCACCCACTTTACAAGTTGC
CGTTCCTTCCGTTGTGAGAGTTGATTGGCATGAGCGAGATCAGCAAATTCTCGCTCAGGTTCAAGATGCAGTGCGATCGC
TACTTAAGGCTGATATACCAGAGAAAATTTCTATTAGTAGGGTAGGGAAAACTATCGGCTTACTTGCATTACTCGAAAAA
CATCTCGACCAGATGCCTTTAACAAAGGCTTATTTGGAATCAGTCGTTGAAACTGTAGAAGAATTTCAGATGCGCCGGAT
CAAGTGGGCAATCAAGCTGCTTGATGAATGTGGAGAAGAAATTATGCGCTGGAAGGTAGTCAGAGTTGCTGCTTTGCGAG
AGGATTGCTCCCAAAGAGTCAGTGCATTTCTGGAAAGTGAACTGGAGAAAGCATACAAGAAAGAGAGGTGA

Upstream 100 bases:

>100_bases
ATCTAAACGGCTTACTTTTCATGGGCAATCATTAATTGCTGGTTATGTAATTCAAATTAATAAAAATCTGCTAAATGATT
TGGTCATTTTTAACAACTAT

Downstream 100 bases:

>100_bases
TTCAATTCACCTCTCCAAGTGATGGGATAAATGCTTTGTGTGTTAGGCCGCGTCGGCTACCAGTAAGCCATTTATAGCGA
TGATGATGATTTGCGCTGCT

Product: Tn7-like protein transposition protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MVSFFPQPYPDEILYSVIARYHIRSGNTSPKITLQDLFKSQTTVATVDLPSNLSNLIKNLQFISNYQVEELIYKHTLYPL
YSPFLPANRSSQVLESMKGDYGGDIHTRAGIMASSITMPKYLRFCPTCWEEDLKNYGEPYWHRIHQIPGILVCPFHGEVL
QDSLAPLHGFNKHEYYAASTDNCSITKEPSILSPDTLKKLLILAKDFWWLLNSEIPCQEPQWFRKQYTNLMIEQGFATPT
GRIYQNKLLDNFLFFYGQEMLSAVDSMVNHNDSNNWVTSIVRKYRKSFHPLRHLLMMRFLKTSVEEFFQKDTEYKPFGEP
PWLCLNAAAEHYLQPVITNLVITLCCDTKKPVGTFSCACGMVYCRTGPDETDEDKVRIGKVKAFGQIWEQKLKELVEVEK
LGLRETARRLNVDARTIKRYVSRLKLTTYWQTRTENDSVGLQGVPEIDPNFATELKLKHRQNWMALQVQNPEASKTTLRK
LVPATYIWLYRNDREWLNQNSPTLQVAVPSVVRVDWHERDQQILAQVQDAVRSLLKADIPEKISISRVGKTIGLLALLEK
HLDQMPLTKAYLESVVETVEEFQMRRIKWAIKLLDECGEEIMRWKVVRVAALREDCSQRVSAFLESELEKAYKKER

Sequences:

>Translated_636_residues
MVSFFPQPYPDEILYSVIARYHIRSGNTSPKITLQDLFKSQTTVATVDLPSNLSNLIKNLQFISNYQVEELIYKHTLYPL
YSPFLPANRSSQVLESMKGDYGGDIHTRAGIMASSITMPKYLRFCPTCWEEDLKNYGEPYWHRIHQIPGILVCPFHGEVL
QDSLAPLHGFNKHEYYAASTDNCSITKEPSILSPDTLKKLLILAKDFWWLLNSEIPCQEPQWFRKQYTNLMIEQGFATPT
GRIYQNKLLDNFLFFYGQEMLSAVDSMVNHNDSNNWVTSIVRKYRKSFHPLRHLLMMRFLKTSVEEFFQKDTEYKPFGEP
PWLCLNAAAEHYLQPVITNLVITLCCDTKKPVGTFSCACGMVYCRTGPDETDEDKVRIGKVKAFGQIWEQKLKELVEVEK
LGLRETARRLNVDARTIKRYVSRLKLTTYWQTRTENDSVGLQGVPEIDPNFATELKLKHRQNWMALQVQNPEASKTTLRK
LVPATYIWLYRNDREWLNQNSPTLQVAVPSVVRVDWHERDQQILAQVQDAVRSLLKADIPEKISISRVGKTIGLLALLEK
HLDQMPLTKAYLESVVETVEEFQMRRIKWAIKLLDECGEEIMRWKVVRVAALREDCSQRVSAFLESELEKAYKKER
>Mature_636_residues
MVSFFPQPYPDEILYSVIARYHIRSGNTSPKITLQDLFKSQTTVATVDLPSNLSNLIKNLQFISNYQVEELIYKHTLYPL
YSPFLPANRSSQVLESMKGDYGGDIHTRAGIMASSITMPKYLRFCPTCWEEDLKNYGEPYWHRIHQIPGILVCPFHGEVL
QDSLAPLHGFNKHEYYAASTDNCSITKEPSILSPDTLKKLLILAKDFWWLLNSEIPCQEPQWFRKQYTNLMIEQGFATPT
GRIYQNKLLDNFLFFYGQEMLSAVDSMVNHNDSNNWVTSIVRKYRKSFHPLRHLLMMRFLKTSVEEFFQKDTEYKPFGEP
PWLCLNAAAEHYLQPVITNLVITLCCDTKKPVGTFSCACGMVYCRTGPDETDEDKVRIGKVKAFGQIWEQKLKELVEVEK
LGLRETARRLNVDARTIKRYVSRLKLTTYWQTRTENDSVGLQGVPEIDPNFATELKLKHRQNWMALQVQNPEASKTTLRK
LVPATYIWLYRNDREWLNQNSPTLQVAVPSVVRVDWHERDQQILAQVQDAVRSLLKADIPEKISISRVGKTIGLLALLEK
HLDQMPLTKAYLESVVETVEEFQMRRIKWAIKLLDECGEEIMRWKVVRVAALREDCSQRVSAFLESELEKAYKKER

Specific function: TnsABC + tnsD promote high-frequency insertion of Tn7 into a specific target site known as att-Tn7 whereas tnsABC + tnsE promote low-frequency insertion into many different sites [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73842; Mature: 73842

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSFFPQPYPDEILYSVIARYHIRSGNTSPKITLQDLFKSQTTVATVDLPSNLSNLIKNL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCEEEEEECCHHHHHHHHHH
QFISNYQVEELIYKHTLYPLYSPFLPANRSSQVLESMKGDYGGDIHTRAGIMASSITMPK
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHH
YLRFCPTCWEEDLKNYGEPYWHRIHQIPGILVCPFHGEVLQDSLAPLHGFNKHEYYAAST
HHHHCCHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEECC
DNCSITKEPSILSPDTLKKLLILAKDFWWLLNSEIPCQEPQWFRKQYTNLMIEQGFATPT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
GRIYQNKLLDNFLFFYGQEMLSAVDSMVNHNDSNNWVTSIVRKYRKSFHPLRHLLMMRFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KTSVEEFFQKDTEYKPFGEPPWLCLNAAAEHYLQPVITNLVITLCCDTKKPVGTFSCACG
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
MVYCRTGPDETDEDKVRIGKVKAFGQIWEQKLKELVEVEKLGLRETARRLNVDARTIKRY
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHH
VSRLKLTTYWQTRTENDSVGLQGVPEIDPNFATELKLKHRQNWMALQVQNPEASKTTLRK
HHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
LVPATYIWLYRNDREWLNQNSPTLQVAVPSVVRVDWHERDQQILAQVQDAVRSLLKADIP
HHCHHEEEEEECCHHHHCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCC
EKISISRVGKTIGLLALLEKHLDQMPLTKAYLESVVETVEEFQMRRIKWAIKLLDECGEE
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMRWKVVRVAALREDCSQRVSAFLESELEKAYKKER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSFFPQPYPDEILYSVIARYHIRSGNTSPKITLQDLFKSQTTVATVDLPSNLSNLIKNL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCEEEEEECCHHHHHHHHHH
QFISNYQVEELIYKHTLYPLYSPFLPANRSSQVLESMKGDYGGDIHTRAGIMASSITMPK
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHH
YLRFCPTCWEEDLKNYGEPYWHRIHQIPGILVCPFHGEVLQDSLAPLHGFNKHEYYAAST
HHHHCCHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEECC
DNCSITKEPSILSPDTLKKLLILAKDFWWLLNSEIPCQEPQWFRKQYTNLMIEQGFATPT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
GRIYQNKLLDNFLFFYGQEMLSAVDSMVNHNDSNNWVTSIVRKYRKSFHPLRHLLMMRFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KTSVEEFFQKDTEYKPFGEPPWLCLNAAAEHYLQPVITNLVITLCCDTKKPVGTFSCACG
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
MVYCRTGPDETDEDKVRIGKVKAFGQIWEQKLKELVEVEKLGLRETARRLNVDARTIKRY
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHH
VSRLKLTTYWQTRTENDSVGLQGVPEIDPNFATELKLKHRQNWMALQVQNPEASKTTLRK
HHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHH
LVPATYIWLYRNDREWLNQNSPTLQVAVPSVVRVDWHERDQQILAQVQDAVRSLLKADIP
HHCHHEEEEEECCHHHHCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCC
EKISISRVGKTIGLLALLEKHLDQMPLTKAYLESVVETVEEFQMRRIKWAIKLLDECGEE
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMRWKVVRVAALREDCSQRVSAFLESELEKAYKKER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2156235; 1655576 [H]