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The map label for this gene is yqeN [H]

Identifier: 75909675

GI number: 75909675

Start: 4302589

End: 4303578

Strand: Direct

Name: yqeN [H]

Synonym: Ava_3469

Alternate gene names: 75909675

Gene position: 4302589-4303578 (Clockwise)

Preceding gene: 75909674

Following gene: 75909676

Centisome position: 67.59

GC content: 42.63

Gene sequence:

>990_bases
ATGCCAATTTATGTTTACTGGGGTGAGGATGACTTTGCGATCGCCAAAGCAGTGACAACTTTACGCGATCGCGTCCTTGA
TCCTCTGTGGACTAGTTTTAATTACACTAGTTTTCCCCCAGAAGACAGCGAAGCACCTATCCAGGCGTTAAACCAAGTTA
TGACACCGGTTTTTGGCGCTGGGGGAAGGTTAGTGTGGCTGATGAATACTAACCTCTTACAAAATTGTCCTGAGAATGTA
TTGGCGGAACTGACGCGCACTTTATCAGTAATTCCCGAAAATTCTTTTTTATTGCTTACCTGTCGTAATAAACCAGATGA
ACGCTTAAAATCCACAAAATTACTGAAGCAATCCGCCACTGAATTTCGAGAATTTCCCCTCATTCCACCGTGGAAGACGG
AGTTACTGATCCAAGCTGTGAATCAAGCTGCTCAAACTGTAGGAGTAAAACTTACACCAAAATCAGCCGAACTTTTAGCA
GAAGCTGTAGGTAATGATACACGGCTGCTTTACAATGAGATGGAGAAATTACGCCTGTACGCTGAGGATAACAATCGGCC
TATTGAAGAAAATACTGTTACTCGGTTAGTCAGAAATACAACCCAAAATAGCTTACAACTAGCCGCAGCAATTAGAGTGG
GCGACACAGCTAAAGCTTTGACTATTTTGGCTGATCTCATCAATGCTGCTGAACCAGAATTGCGGATAATAGCCACCTTA
ATTGGTCAATTTCGCACTTGGTTATGGGTGAAACTGATGGTAGAAAGTGGAGAACGCAATCCCCAGGCGATCGCCCAAGC
TGCTGAAATCGGTAACCCTAAACGTATCTACTTTCTCCAGCAAGAAGTCCAATCACTTTCTCTCAGGCAATTAATTTCTT
GTCTACCATTATTACTAGAGTTGGAGGTTACTGTTAAACAAGGCCGGGCTGAGATATCAATACTTCAAATTAAAATCATA
GAACTCTGTCAACTATGCCAACGCATCTAA

Upstream 100 bases:

>100_bases
TTTAGGAATGCCAACAGAGGTTTTCTGTTGAGACTAGATATAAGGGTTTTCACTGATTTAAATTTCCAGACTTGCTGCTA
AATTTCTTTGAGGTTTTCCT

Downstream 100 bases:

>100_bases
AAAAATATTTTCATAGATGCTATGAGTTGCCGGAACTTATCACTCACAAAATAAATCAAAGTTACTAATATATCCTTGCT
GTCTTTCTGTGTCAGACCTG

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MPIYVYWGEDDFAIAKAVTTLRDRVLDPLWTSFNYTSFPPEDSEAPIQALNQVMTPVFGAGGRLVWLMNTNLLQNCPENV
LAELTRTLSVIPENSFLLLTCRNKPDERLKSTKLLKQSATEFREFPLIPPWKTELLIQAVNQAAQTVGVKLTPKSAELLA
EAVGNDTRLLYNEMEKLRLYAEDNNRPIEENTVTRLVRNTTQNSLQLAAAIRVGDTAKALTILADLINAAEPELRIIATL
IGQFRTWLWVKLMVESGERNPQAIAQAAEIGNPKRIYFLQQEVQSLSLRQLISCLPLLLELEVTVKQGRAEISILQIKII
ELCQLCQRI

Sequences:

>Translated_329_residues
MPIYVYWGEDDFAIAKAVTTLRDRVLDPLWTSFNYTSFPPEDSEAPIQALNQVMTPVFGAGGRLVWLMNTNLLQNCPENV
LAELTRTLSVIPENSFLLLTCRNKPDERLKSTKLLKQSATEFREFPLIPPWKTELLIQAVNQAAQTVGVKLTPKSAELLA
EAVGNDTRLLYNEMEKLRLYAEDNNRPIEENTVTRLVRNTTQNSLQLAAAIRVGDTAKALTILADLINAAEPELRIIATL
IGQFRTWLWVKLMVESGERNPQAIAQAAEIGNPKRIYFLQQEVQSLSLRQLISCLPLLLELEVTVKQGRAEISILQIKII
ELCQLCQRI
>Mature_328_residues
PIYVYWGEDDFAIAKAVTTLRDRVLDPLWTSFNYTSFPPEDSEAPIQALNQVMTPVFGAGGRLVWLMNTNLLQNCPENVL
AELTRTLSVIPENSFLLLTCRNKPDERLKSTKLLKQSATEFREFPLIPPWKTELLIQAVNQAAQTVGVKLTPKSAELLAE
AVGNDTRLLYNEMEKLRLYAEDNNRPIEENTVTRLVRNTTQNSLQLAAAIRVGDTAKALTILADLINAAEPELRIIATLI
GQFRTWLWVKLMVESGERNPQAIAQAAEIGNPKRIYFLQQEVQSLSLRQLISCLPLLLELEVTVKQGRAEISILQIKIIE
LCQLCQRI

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: 2.7.7.7

Molecular weight: Translated: 37110; Mature: 36978

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIYVYWGEDDFAIAKAVTTLRDRVLDPLWTSFNYTSFPPEDSEAPIQALNQVMTPVFGA
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
GGRLVWLMNTNLLQNCPENVLAELTRTLSVIPENSFLLLTCRNKPDERLKSTKLLKQSAT
CCEEEEEECCHHHHHCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
EFREFPLIPPWKTELLIQAVNQAAQTVGVKLTPKSAELLAEAVGNDTRLLYNEMEKLRLY
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHEEE
AEDNNRPIEENTVTRLVRNTTQNSLQLAAAIRVGDTAKALTILADLINAAEPELRIIATL
ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCHHHHHHHH
IGQFRTWLWVKLMVESGERNPQAIAQAAEIGNPKRIYFLQQEVQSLSLRQLISCLPLLLE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
LEVTVKQGRAEISILQIKIIELCQLCQRI
HHHHHHCCCCEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PIYVYWGEDDFAIAKAVTTLRDRVLDPLWTSFNYTSFPPEDSEAPIQALNQVMTPVFGA
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
GGRLVWLMNTNLLQNCPENVLAELTRTLSVIPENSFLLLTCRNKPDERLKSTKLLKQSAT
CCEEEEEECCHHHHHCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
EFREFPLIPPWKTELLIQAVNQAAQTVGVKLTPKSAELLAEAVGNDTRLLYNEMEKLRLY
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHEEE
AEDNNRPIEENTVTRLVRNTTQNSLQLAAAIRVGDTAKALTILADLINAAEPELRIIATL
ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCHHHHHHHH
IGQFRTWLWVKLMVESGERNPQAIAQAAEIGNPKRIYFLQQEVQSLSLRQLISCLPLLLE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
LEVTVKQGRAEISILQIKIIELCQLCQRI
HHHHHHCCCCEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]