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The map label for this gene is chlB

Identifier: 75909672

GI number: 75909672

Start: 4295958

End: 4297484

Strand: Direct

Name: chlB

Synonym: Ava_3466

Alternate gene names: 75909672

Gene position: 4295958-4297484 (Clockwise)

Preceding gene: 75909668

Following gene: 75909673

Centisome position: 67.49

GC content: 46.37

Gene sequence:

>1527_bases
ATGAAATTGGCTTACTGGATGTATGCAGGCCCAGCCCACATTGGCACTTTGCGAGTCGCAACTTCATTTAAAAACGTCCA
TGCTATTATGCACGCGCCTCTAGGCGATGACTACTTTAACGTTATGCGCTCAATGCTGTCGCGGGAGCGGGACTTCACAC
CAGTAACAACCAGCGTGGTTGACCGCCATGTTTTAGCCCGTGGTTCTCAAGAAAAGGTGGTAGAAAACATCACCCGCAAA
GATGCAGAGGAACACCCAGATTTAATTGTCTTAACTCCCACCTGTACCTCCAGTATTTTGCAAGAAGACTTGGAAAACTT
TGTCGAACGCGCCCAATTGGATGCGAAAGGGGACGTATTACTGGCGGATGTGAACCACTATCGGGTGAACGAACTGCAAG
CAGGCGATCGCACTCTCCACCAAATTGTTCAATACTATATTGAAAAAGCCCGCAAAAAAGGCGAACTCCCAGAAGGGAAA
ACAGCCAAGCCCTCAGTTAACATTATCGGCATTTCTACCCTGGGGTTCCACAATAACCACGACTGCACCGAACTCAAAAG
GCTAATGGCTGATTTGGGAATTGAGGTCAACGCGGTCATTCCTGAAGGCGCTTCCGTCCACGAGTTGAAGAATTTACCCA
GAGCTTGGTTTAACCTCGTTCCTTACCGGGAATTGGGTTTAATGACAGCTAGTTACCTGGAAAAAGAATTTGGCACACCT
TGTATAGATATTGTGCCAATGGGTGTAGTAGAAACTGCCCGATGTATCCGTAAAATTCAGGAAGTGATTAACGCTCAAGG
TGCTGATGTTAATTACGAAGAGTATATCAACGAGCAAACCTTGTATGTATCCCAAGCTGCCTGGTTCTCCCGTTCCATCG
ACTGTCAAAACCTGACTGGGAAAAAAGCAGTGGTTTTTGGCGACAACACCCACGCCGCCGCCTTGACAAAGATTTTGTCC
CGCGAAATGGGGATTCACGTTGTTTGGGCGGGAACCTACTGCAAGTATGATGCTGATTGGTTCCGCGAACAAGTAAGCGA
GTATTGCGATGAAGTACTGATTACGGAAGATCATGGGGAAATTGGGGATGCGATCGCCCGTGTTGAACCCTCCGCCATCT
TCGGTACACAAATGGAACGCCACGTTGGTAAGCGTTTAGATATTCCTTGTGGTGTGATTGCTGCACCCATTCACGTACAA
AACTTCCCCATCGGTTACAAACCATTCTTGGGTTATGAAGGAACCAATCAAATCACAGATTTAATCTACAATTCCTTTAC
TTTAGGTATGGAAGACCACCTATTAGAAATATTTGGTGGACATGATACCAAGGAAGTAATTACTAAAGGTATTTCTGCTG
AATCTGACCTGAGTTGGACAAAAGACGGCTTGGCAGAACTGAACAAAATCCCTGGTTTCGTGCGGGGAAAAGTCAAGCGG
AATACAGAAAAATTTGCACGCGATCGCGGTTTTAAAGATATCTCAGCAGAGGTGTTATACGCAGCCAAGGAAGCAGTAGG
AGCATAG

Upstream 100 bases:

>100_bases
TGGCGGCTACAAGTTTTGGGACAATCAGCATCAACAAACTAATCAAGCACTTATAGTCCCGTTTTCACTGTTATTTAACT
TTACAAGGGAGTAAAACATA

Downstream 100 bases:

>100_bases
TAGAAACTGGGTAATGGGTAATGGGTAATGGGTAATGCCGAATCAGAATTTCTTCTCCTGCCTCCTTCCTTTTACCTACT
GCCCCTACCCATAGCTAGAT

Product: light-independent protochlorophyllide reductase subunit B

Products: NA

Alternate protein names: DPOR subunit B; LI-POR subunit B

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MKLAYWMYAGPAHIGTLRVATSFKNVHAIMHAPLGDDYFNVMRSMLSRERDFTPVTTSVVDRHVLARGSQEKVVENITRK
DAEEHPDLIVLTPTCTSSILQEDLENFVERAQLDAKGDVLLADVNHYRVNELQAGDRTLHQIVQYYIEKARKKGELPEGK
TAKPSVNIIGISTLGFHNNHDCTELKRLMADLGIEVNAVIPEGASVHELKNLPRAWFNLVPYRELGLMTASYLEKEFGTP
CIDIVPMGVVETARCIRKIQEVINAQGADVNYEEYINEQTLYVSQAAWFSRSIDCQNLTGKKAVVFGDNTHAAALTKILS
REMGIHVVWAGTYCKYDADWFREQVSEYCDEVLITEDHGEIGDAIARVEPSAIFGTQMERHVGKRLDIPCGVIAAPIHVQ
NFPIGYKPFLGYEGTNQITDLIYNSFTLGMEDHLLEIFGGHDTKEVITKGISAESDLSWTKDGLAELNKIPGFVRGKVKR
NTEKFARDRGFKDISAEVLYAAKEAVGA

Sequences:

>Translated_508_residues
MKLAYWMYAGPAHIGTLRVATSFKNVHAIMHAPLGDDYFNVMRSMLSRERDFTPVTTSVVDRHVLARGSQEKVVENITRK
DAEEHPDLIVLTPTCTSSILQEDLENFVERAQLDAKGDVLLADVNHYRVNELQAGDRTLHQIVQYYIEKARKKGELPEGK
TAKPSVNIIGISTLGFHNNHDCTELKRLMADLGIEVNAVIPEGASVHELKNLPRAWFNLVPYRELGLMTASYLEKEFGTP
CIDIVPMGVVETARCIRKIQEVINAQGADVNYEEYINEQTLYVSQAAWFSRSIDCQNLTGKKAVVFGDNTHAAALTKILS
REMGIHVVWAGTYCKYDADWFREQVSEYCDEVLITEDHGEIGDAIARVEPSAIFGTQMERHVGKRLDIPCGVIAAPIHVQ
NFPIGYKPFLGYEGTNQITDLIYNSFTLGMEDHLLEIFGGHDTKEVITKGISAESDLSWTKDGLAELNKIPGFVRGKVKR
NTEKFARDRGFKDISAEVLYAAKEAVGA
>Mature_508_residues
MKLAYWMYAGPAHIGTLRVATSFKNVHAIMHAPLGDDYFNVMRSMLSRERDFTPVTTSVVDRHVLARGSQEKVVENITRK
DAEEHPDLIVLTPTCTSSILQEDLENFVERAQLDAKGDVLLADVNHYRVNELQAGDRTLHQIVQYYIEKARKKGELPEGK
TAKPSVNIIGISTLGFHNNHDCTELKRLMADLGIEVNAVIPEGASVHELKNLPRAWFNLVPYRELGLMTASYLEKEFGTP
CIDIVPMGVVETARCIRKIQEVINAQGADVNYEEYINEQTLYVSQAAWFSRSIDCQNLTGKKAVVFGDNTHAAALTKILS
REMGIHVVWAGTYCKYDADWFREQVSEYCDEVLITEDHGEIGDAIARVEPSAIFGTQMERHVGKRLDIPCGVIAAPIHVQ
NFPIGYKPFLGYEGTNQITDLIYNSFTLGMEDHLLEIFGGHDTKEVITKGISAESDLSWTKDGLAELNKIPGFVRGKVKR
NTEKFARDRGFKDISAEVLYAAKEAVGA

Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ChlB/BchB/BchZ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHLB_ANAVT (Q3M7G3)

Other databases:

- EMBL:   CP000117
- RefSeq:   YP_323968.1
- STRING:   Q3M7G3
- GeneID:   3679778
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_3466
- NMPDR:   fig|240292.3.peg.4016
- eggNOG:   COG2710
- HOGENOM:   HBG284444
- OMA:   TQMERHS
- ProtClustDB:   PRK02910
- BioCyc:   AVAR240292:AVA_3466-MONOMER
- HAMAP:   MF_00353
- InterPro:   IPR000510
- InterPro:   IPR013580
- InterPro:   IPR005969
- InterPro:   IPR016209
- PIRSF:   PIRSF000163
- TIGRFAMs:   TIGR01278

Pfam domain/function: PF00148 Oxidored_nitro; PF08369 PCP_red

EC number: 1.18.-.-

Molecular weight: Translated: 56807; Mature: 56807

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAYWMYAGPAHIGTLRVATSFKNVHAIMHAPLGDDYFNVMRSMLSRERDFTPVTTSVV
CEEEEEEEECCCHHCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
DRHVLARGSQEKVVENITRKDAEEHPDLIVLTPTCTSSILQEDLENFVERAQLDAKGDVL
HHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEE
LADVNHYRVNELQAGDRTLHQIVQYYIEKARKKGELPEGKTAKPSVNIIGISTLGFHNNH
EEECCCEECCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCC
DCTELKRLMADLGIEVNAVIPEGASVHELKNLPRAWFNLVPYRELGLMTASYLEKEFGTP
CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCC
CIDIVPMGVVETARCIRKIQEVINAQGADVNYEEYINEQTLYVSQAAWFSRSIDCQNLTG
EEEHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEHHHHHHCCCCCCCCCC
KKAVVFGDNTHAAALTKILSREMGIHVVWAGTYCKYDADWFREQVSEYCDEVLITEDHGE
CEEEEECCCCHHHHHHHHHHHHCCEEEEEECCEECCCHHHHHHHHHHHHHHEEEECCCCH
IGDAIARVEPSAIFGTQMERHVGKRLDIPCGVIAAPIHVQNFPIGYKPFLGYEGTNQITD
HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEECCEEEECCCCCCCCCCCCCCCHHHHH
LIYNSFTLGMEDHLLEIFGGHDTKEVITKGISAESDLSWTKDGLAELNKIPGFVRGKVKR
HHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
NTEKFARDRGFKDISAEVLYAAKEAVGA
HHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLAYWMYAGPAHIGTLRVATSFKNVHAIMHAPLGDDYFNVMRSMLSRERDFTPVTTSVV
CEEEEEEEECCCHHCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHH
DRHVLARGSQEKVVENITRKDAEEHPDLIVLTPTCTSSILQEDLENFVERAQLDAKGDVL
HHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEE
LADVNHYRVNELQAGDRTLHQIVQYYIEKARKKGELPEGKTAKPSVNIIGISTLGFHNNH
EEECCCEECCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCC
DCTELKRLMADLGIEVNAVIPEGASVHELKNLPRAWFNLVPYRELGLMTASYLEKEFGTP
CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCC
CIDIVPMGVVETARCIRKIQEVINAQGADVNYEEYINEQTLYVSQAAWFSRSIDCQNLTG
EEEHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEHHHHHHCCCCCCCCCC
KKAVVFGDNTHAAALTKILSREMGIHVVWAGTYCKYDADWFREQVSEYCDEVLITEDHGE
CEEEEECCCCHHHHHHHHHHHHCCEEEEEECCEECCCHHHHHHHHHHHHHHEEEECCCCH
IGDAIARVEPSAIFGTQMERHVGKRLDIPCGVIAAPIHVQNFPIGYKPFLGYEGTNQITD
HHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEECCEEEECCCCCCCCCCCCCCCHHHHH
LIYNSFTLGMEDHLLEIFGGHDTKEVITKGISAESDLSWTKDGLAELNKIPGFVRGKVKR
HHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
NTEKFARDRGFKDISAEVLYAAKEAVGA
HHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA