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The map label for this gene is ybbK [C]

Identifier: 75909495

GI number: 75909495

Start: 4102564

End: 4103400

Strand: Direct

Name: ybbK [C]

Synonym: Ava_3288

Alternate gene names: 75909495

Gene position: 4102564-4103400 (Clockwise)

Preceding gene: 75909494

Following gene: 75909498

Centisome position: 64.45

GC content: 43.25

Gene sequence:

>837_bases
ATGGAGCCAATTATTGCTATAGTCTTAGCGCTTATCGGTTATGCCTTAGGATCGGCAAAAATTATTAATGAAGGGAATGC
AGCCCTTGTTGAACGCTTAGGACGAAGACATCGCACACTAAATCCCGGCTTAAACTTTATCGTGCCTTTGGTTGATCAGG
TGGTGATGGAAGACACCACACGGGAGCAATTTATAGATATCAAACCTCAAAATGTCATCACTAGGGATAATATTTACCTA
GAAGTTGATGCTATTCTTTTCTGGCGTATCCGGGATATGGAGAAAAGCTTCTATGCAATTGAAGACTTGCAGGGAGCGTT
GACACAACTGGCGACAACCACACTCCGGGAAGTGATTGCTCAAAATACGGTAGAAGATACCAATGTCACCAGAGATGAAA
TGAACCGAACCATCTTAAGTGAGTTGAACAGCACAACAGCAGATTGGGGGGTTGAAATTATCCGGTTAGATATTCAAAGA
ATTACACCACCGGAAAGTGTGCGGAAAACTATGGAAGAGGAACGGGCGGCTGAATTCAAAAAACGGGCGCTAATTTCCGA
AGCTGAAGGAGAACGTCAAGCTGCTATCAAGAAGGCAGAAGGAACAATGACTTCTATGCAGATAATTGCCGAAGCATTGC
GTAGTAATCCCGAAAGTAAAGAAATTCTCCGTTATTTGGTCGCTCAAGATTATATTAATGCTAGTTACAAACTAGGAGAA
AGTACCAATGCCAAGGTTGTGTTTGTAGACCCAGGCAAATCCGGTGAATTGATGAAAGAGGTTATGGCGGAGACCGTAAA
TACTGATGGTAATGGGAAGAGTGGGGAGCATGGGTAG

Upstream 100 bases:

>100_bases
TACAAGTATTCAAACAGACATGATAATAGACTTAAATGTAGGGCATGGTAGTACCATGTCCTTTAAACTAAAATTGCCCT
AAAAGGTAATAGGAGCATAT

Downstream 100 bases:

>100_bases
AGAGTGGGGAGCAGGGAGCAGGGGGGAATAGCTCAATCCTCAGCACTCAATAACTCACCCCGAAAGAGTGCATCAGCAAC
TAGAGATACATCACGCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MEPIIAIVLALIGYALGSAKIINEGNAALVERLGRRHRTLNPGLNFIVPLVDQVVMEDTTREQFIDIKPQNVITRDNIYL
EVDAILFWRIRDMEKSFYAIEDLQGALTQLATTTLREVIAQNTVEDTNVTRDEMNRTILSELNSTTADWGVEIIRLDIQR
ITPPESVRKTMEEERAAEFKKRALISEAEGERQAAIKKAEGTMTSMQIIAEALRSNPESKEILRYLVAQDYINASYKLGE
STNAKVVFVDPGKSGELMKEVMAETVNTDGNGKSGEHG

Sequences:

>Translated_278_residues
MEPIIAIVLALIGYALGSAKIINEGNAALVERLGRRHRTLNPGLNFIVPLVDQVVMEDTTREQFIDIKPQNVITRDNIYL
EVDAILFWRIRDMEKSFYAIEDLQGALTQLATTTLREVIAQNTVEDTNVTRDEMNRTILSELNSTTADWGVEIIRLDIQR
ITPPESVRKTMEEERAAEFKKRALISEAEGERQAAIKKAEGTMTSMQIIAEALRSNPESKEILRYLVAQDYINASYKLGE
STNAKVVFVDPGKSGELMKEVMAETVNTDGNGKSGEHG
>Mature_278_residues
MEPIIAIVLALIGYALGSAKIINEGNAALVERLGRRHRTLNPGLNFIVPLVDQVVMEDTTREQFIDIKPQNVITRDNIYL
EVDAILFWRIRDMEKSFYAIEDLQGALTQLATTTLREVIAQNTVEDTNVTRDEMNRTILSELNSTTADWGVEIIRLDIQR
ITPPESVRKTMEEERAAEFKKRALISEAEGERQAAIKKAEGTMTSMQIIAEALRSNPESKEILRYLVAQDYINASYKLGE
STNAKVVFVDPGKSGELMKEVMAETVNTDGNGKSGEHG

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=274, Percent_Identity=29.5620437956204, Blast_Score=138, Evalue=6e-33,
Organism=Homo sapiens, GI221316744, Length=227, Percent_Identity=29.9559471365639, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI21686995, Length=227, Percent_Identity=29.9559471365639, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI38016911, Length=234, Percent_Identity=30.3418803418803, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI7657615, Length=233, Percent_Identity=23.175965665236, Blast_Score=75, Evalue=7e-14,
Organism=Escherichia coli, GI1786697, Length=300, Percent_Identity=31.3333333333333, Blast_Score=146, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI32564147, Length=192, Percent_Identity=35.9375, Blast_Score=133, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI71989948, Length=219, Percent_Identity=29.6803652968037, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17569499, Length=224, Percent_Identity=28.125, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI71987621, Length=249, Percent_Identity=28.1124497991968, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71987612, Length=249, Percent_Identity=28.1124497991968, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI25153583, Length=249, Percent_Identity=28.1124497991968, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71989955, Length=180, Percent_Identity=30.5555555555556, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17569493, Length=194, Percent_Identity=27.8350515463918, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI193209764, Length=194, Percent_Identity=27.8350515463918, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17570459, Length=217, Percent_Identity=30.4147465437788, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17569497, Length=228, Percent_Identity=26.3157894736842, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193210507, Length=246, Percent_Identity=28.0487804878049, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17570161, Length=246, Percent_Identity=28.0487804878049, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI32566490, Length=178, Percent_Identity=26.9662921348315, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17542664, Length=163, Percent_Identity=26.9938650306748, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71989963, Length=117, Percent_Identity=31.6239316239316, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45550506, Length=286, Percent_Identity=32.1678321678322, Blast_Score=142, Evalue=3e-34,
Organism=Drosophila melanogaster, GI21356845, Length=205, Percent_Identity=29.2682926829268, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281361633, Length=210, Percent_Identity=29.5238095238095, Blast_Score=95, Evalue=7e-20,
Organism=Drosophila melanogaster, GI281361631, Length=210, Percent_Identity=29.5238095238095, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI28573263, Length=225, Percent_Identity=27.1111111111111, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI45556022, Length=230, Percent_Identity=26.0869565217391, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI62484448, Length=252, Percent_Identity=27.3809523809524, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI281365664, Length=252, Percent_Identity=27.3809523809524, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI62484274, Length=252, Percent_Identity=27.3809523809524, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24657857, Length=252, Percent_Identity=27.3809523809524, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI18860517, Length=252, Percent_Identity=26.5873015873016, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281361635, Length=150, Percent_Identity=29.3333333333333, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 31098; Mature: 31098

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPIIAIVLALIGYALGSAKIINEGNAALVERLGRRHRTLNPGLNFIVPLVDQVVMEDTT
CCHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
REQFIDIKPQNVITRDNIYLEVDAILFWRIRDMEKSFYAIEDLQGALTQLATTTLREVIA
HHHHCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNTVEDTNVTRDEMNRTILSELNSTTADWGVEIIRLDIQRITPPESVRKTMEEERAAEFK
HCCCCCCCCCHHHHHHHHHHHHCCCCHHHCHHHEEEEHHHCCCHHHHHHHHHHHHHHHHH
KRALISEAEGERQAAIKKAEGTMTSMQIIAEALRSNPESKEILRYLVAQDYINASYKLGE
HHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECCC
STNAKVVFVDPGKSGELMKEVMAETVNTDGNGKSGEHG
CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEPIIAIVLALIGYALGSAKIINEGNAALVERLGRRHRTLNPGLNFIVPLVDQVVMEDTT
CCHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
REQFIDIKPQNVITRDNIYLEVDAILFWRIRDMEKSFYAIEDLQGALTQLATTTLREVIA
HHHHCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNTVEDTNVTRDEMNRTILSELNSTTADWGVEIIRLDIQRITPPESVRKTMEEERAAEFK
HCCCCCCCCCHHHHHHHHHHHHCCCCHHHCHHHEEEEHHHCCCHHHHHHHHHHHHHHHHH
KRALISEAEGERQAAIKKAEGTMTSMQIIAEALRSNPESKEILRYLVAQDYINASYKLGE
HHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECCC
STNAKVVFVDPGKSGELMKEVMAETVNTDGNGKSGEHG
CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]