| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909463
Identifier: 75909463
GI number: 75909463
Start: 4056742
End: 4057503
Strand: Direct
Name: 75909463
Synonym: Ava_3256
Alternate gene names: NA
Gene position: 4056742-4057503 (Clockwise)
Preceding gene: 75909460
Following gene: 75909464
Centisome position: 63.73
GC content: 35.96
Gene sequence:
>762_bases ATGTCAATAGCTAAATTCAGTAAGTCACCACTGACAGAAGTTGTCTTGGGCGTTGAATTCAACGATCCAGGGTTCTCTTC TGTGCATTTCGGACTGTACTGGCAGAGTATTCAAGACCGATTTCCTTCTCCGCCACTTGACAGACCGCCAATAGGAGACA TTGAACTTCTTCCTATGATGCCCAAACTCCGTCGAGTTTGGTTTGAGTCACTTGACAGAAAAGAACTCATACAGTTGCAG TCAAACCGATTTCATTACAACTGGCGTCGTCAAGGTGAAGCAGATGAATATCCTCATTTTAAAGAAATATATCCAAAATT TCAAAGTGAATGGCAGCACTTTCAGAATTGGTGGTTAAGCACTGAGAAAACATTTTTACAACCGATTCGTTATGAACTTA CTTATCTTAATCAGATTGATCAAAATTTTGGTTGGAAAGAGCCAGGAGATAACAATAAAATTTTCAACTTCATGAGCAAA GAATGGGAAATTACTCTGAAACAACCTCGATTGTTTAATGCTGAATTTGAATTTGAACTTCCTGATAATTTAGGGAATTT GTTAGTTCGTATTAACCAAATAATTAGGTTGGAAGATAATAATTCTATGCTACTTTTAGAATTAACAAGTCGTAGCTACG ATACAAAAGTAAGTTATGAAGAATGGTTTCACTCTGCCCATAAATACACAGTTAATACATTTATAGAACTATTACAAAAA GATGTTAAAAAAGAATGGGGTCTAAAATGGTTGGGACAGTAG
Upstream 100 bases:
>100_bases CTTAACTGTGTAGCTTGCTGTACTTGTTCAAGGGATAACTACAAAAGGAGTAAGAATTTGATATTGTCTGAGGAGCAGCC ACAGTGATGAGGTTGGGCGA
Downstream 100 bases:
>100_bases GTCAAACAATCTCTACAGCGAATAATACGAATAAATTAGAAAATTTGGGAAACAGACAAATTAACGCAAGTTATGTTAAT CATAAATACGGCGATCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSIAKFSKSPLTEVVLGVEFNDPGFSSVHFGLYWQSIQDRFPSPPLDRPPIGDIELLPMMPKLRRVWFESLDRKELIQLQ SNRFHYNWRRQGEADEYPHFKEIYPKFQSEWQHFQNWWLSTEKTFLQPIRYELTYLNQIDQNFGWKEPGDNNKIFNFMSK EWEITLKQPRLFNAEFEFELPDNLGNLLVRINQIIRLEDNNSMLLLELTSRSYDTKVSYEEWFHSAHKYTVNTFIELLQK DVKKEWGLKWLGQ
Sequences:
>Translated_253_residues MSIAKFSKSPLTEVVLGVEFNDPGFSSVHFGLYWQSIQDRFPSPPLDRPPIGDIELLPMMPKLRRVWFESLDRKELIQLQ SNRFHYNWRRQGEADEYPHFKEIYPKFQSEWQHFQNWWLSTEKTFLQPIRYELTYLNQIDQNFGWKEPGDNNKIFNFMSK EWEITLKQPRLFNAEFEFELPDNLGNLLVRINQIIRLEDNNSMLLLELTSRSYDTKVSYEEWFHSAHKYTVNTFIELLQK DVKKEWGLKWLGQ >Mature_252_residues SIAKFSKSPLTEVVLGVEFNDPGFSSVHFGLYWQSIQDRFPSPPLDRPPIGDIELLPMMPKLRRVWFESLDRKELIQLQS NRFHYNWRRQGEADEYPHFKEIYPKFQSEWQHFQNWWLSTEKTFLQPIRYELTYLNQIDQNFGWKEPGDNNKIFNFMSKE WEITLKQPRLFNAEFEFELPDNLGNLLVRINQIIRLEDNNSMLLLELTSRSYDTKVSYEEWFHSAHKYTVNTFIELLQKD VKKEWGLKWLGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30578; Mature: 30447
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAKFSKSPLTEVVLGVEFNDPGFSSVHFGLYWQSIQDRFPSPPLDRPPIGDIELLPMM CCCCCCCCCCHHHEEEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC PKLRRVWFESLDRKELIQLQSNRFHYNWRRQGEADEYPHFKEIYPKFQSEWQHFQNWWLS HHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TEKTFLQPIRYELTYLNQIDQNFGWKEPGDNNKIFNFMSKEWEITLKQPRLFNAEFEFEL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEECCCEEECCEEEEEC PDNLGNLLVRINQIIRLEDNNSMLLLELTSRSYDTKVSYEEWFHSAHKYTVNTFIELLQK CCHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DVKKEWGLKWLGQ HHHHHCCCCCCCC >Mature Secondary Structure SIAKFSKSPLTEVVLGVEFNDPGFSSVHFGLYWQSIQDRFPSPPLDRPPIGDIELLPMM CCCCCCCCCHHHEEEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC PKLRRVWFESLDRKELIQLQSNRFHYNWRRQGEADEYPHFKEIYPKFQSEWQHFQNWWLS HHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TEKTFLQPIRYELTYLNQIDQNFGWKEPGDNNKIFNFMSKEWEITLKQPRLFNAEFEFEL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEECCCEEECCEEEEEC PDNLGNLLVRINQIIRLEDNNSMLLLELTSRSYDTKVSYEEWFHSAHKYTVNTFIELLQK CCHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DVKKEWGLKWLGQ HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA