| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909369
Identifier: 75909369
GI number: 75909369
Start: 3925401
End: 3925946
Strand: Direct
Name: 75909369
Synonym: Ava_3162
Alternate gene names: NA
Gene position: 3925401-3925946 (Clockwise)
Preceding gene: 75909368
Following gene: 75909370
Centisome position: 61.66
GC content: 36.63
Gene sequence:
>546_bases ATGAATAATTTGATGCAGCACCGGTATTGTCTCGGCATAACAACGATTATTCTGGCTCTCTATCAAATCTGTACTGCGGG TATAGCATCTGCTAATCCAACTTGTACAAGTACTAATGACGGCTGTATTGTCATTGAAAATGAAATACTAGAAATTAGCC AAGAAGATATTGTGCCAGATGGTCGAACTGTGAATTTAAGTGGTCATGGAGTGATAGGTGAAACTTCCTTAAATACATCT AACCCGTTCTTAGTTAATACACAAATTAGCAAGACAATTAATAATCTCTGGCAGTTCCAAATAGATAGTAATAACCTTAA TAGTTTACAGGTACAATACACCCCTTCTGGTAATTTTTCACTTACACAAGGAAGCTCCGTAATTATAGTAGATATTGACC CTCTAGCACCCATTGTTATCGGACAAGGTGCAACACTGGATAGGGTGATAGTCCAAGGAGGAGCAACTTTTACTTTAGAC TTATCACAAGTAACAAAATCCGGTATTCATTCTGGTAGTTTGCAGTTAACAATTACAGAATTTTAA
Upstream 100 bases:
>100_bases GACTCTGAATCTAAGCCATGAGTTATAAAGTTTAATTATTTCTGCTCTGTCCGTAATCAATTGCCATATTTTTTAGTTAT CTGATTGAAATAATTGCTGA
Downstream 100 bases:
>100_bases ACAATTAATCTATTTATTATTAATGATGAACAAGCAGATAAAGCTAACTAAAACACTAAGAAATGTTGGGCTGAGTATCT TAGCAACAGCGAGCGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNNLMQHRYCLGITTIILALYQICTAGIASANPTCTSTNDGCIVIENEILEISQEDIVPDGRTVNLSGHGVIGETSLNTS NPFLVNTQISKTINNLWQFQIDSNNLNSLQVQYTPSGNFSLTQGSSVIIVDIDPLAPIVIGQGATLDRVIVQGGATFTLD LSQVTKSGIHSGSLQLTITEF
Sequences:
>Translated_181_residues MNNLMQHRYCLGITTIILALYQICTAGIASANPTCTSTNDGCIVIENEILEISQEDIVPDGRTVNLSGHGVIGETSLNTS NPFLVNTQISKTINNLWQFQIDSNNLNSLQVQYTPSGNFSLTQGSSVIIVDIDPLAPIVIGQGATLDRVIVQGGATFTLD LSQVTKSGIHSGSLQLTITEF >Mature_181_residues MNNLMQHRYCLGITTIILALYQICTAGIASANPTCTSTNDGCIVIENEILEISQEDIVPDGRTVNLSGHGVIGETSLNTS NPFLVNTQISKTINNLWQFQIDSNNLNSLQVQYTPSGNFSLTQGSSVIIVDIDPLAPIVIGQGATLDRVIVQGGATFTLD LSQVTKSGIHSGSLQLTITEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19367; Mature: 19367
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLMQHRYCLGITTIILALYQICTAGIASANPTCTSTNDGCIVIENEILEISQEDIVPD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEECCHHHCCCC GRTVNLSGHGVIGETSLNTSNPFLVNTQISKTINNLWQFQIDSNNLNSLQVQYTPSGNFS CCEEEECCCCEEEECCCCCCCCEEEECHHHHHHHHEEEEEECCCCCCEEEEEECCCCCEE LTQGSSVIIVDIDPLAPIVIGQGATLDRVIVQGGATFTLDLSQVTKSGIHSGSLQLTITE EECCCEEEEEEECCCCCEEEECCCCEEEEEEECCCEEEEEHHHHHHCCCCCCEEEEEEEE F C >Mature Secondary Structure MNNLMQHRYCLGITTIILALYQICTAGIASANPTCTSTNDGCIVIENEILEISQEDIVPD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEECCHHHCCCC GRTVNLSGHGVIGETSLNTSNPFLVNTQISKTINNLWQFQIDSNNLNSLQVQYTPSGNFS CCEEEECCCCEEEECCCCCCCCEEEECHHHHHHHHEEEEEECCCCCCEEEEEECCCCCEE LTQGSSVIIVDIDPLAPIVIGQGATLDRVIVQGGATFTLDLSQVTKSGIHSGSLQLTITE EECCCEEEEEEECCCCCEEEECCCCEEEEEEECCCEEEEEHHHHHHCCCCCCEEEEEEEE F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA