| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909323
Identifier: 75909323
GI number: 75909323
Start: 3870822
End: 3871295
Strand: Direct
Name: 75909323
Synonym: Ava_3116
Alternate gene names: NA
Gene position: 3870822-3871295 (Clockwise)
Preceding gene: 75909319
Following gene: 75909325
Centisome position: 60.81
GC content: 48.1
Gene sequence:
>474_bases ATGGCTGAAAGTAGTGAAATTGGCCCACACCTAACACAACAGTGGCTAACAGAAATCCAAACACTCAAGCAGCAGCTAAT AGAACAGCAGCAAGAACGCGATGCTGCTTGGGAAAGTGCTGAAAAGTGGCGTAAACTCTACAACACAGAAGCAGAACAAC GCCGCACAGATACGGATTTCTTTCGCCAAACGATCACCTCCCTCAAAGCCGAGATTCAACAACTCAAGGGAATTGACGGG CAAACATTACCCGATGCGACAACTAGCGTCGGCGTACAGCAGGAGTTGGCACAAATCCGCACTGTGGAGGATTTGAAAGC CAAACTAGTTGAAGTGATCAAAGAACGCGATCGCCTACGCCAAGCCTTGAAAACAGAACAAGAAAACCACGCCCAAACCC GCAAAAGTTTAACTACTGCTTTGGGTGATGCAATTGATAGTTTGGCAAAGGAACGAGGACGGGGTGGAGAGTAG
Upstream 100 bases:
>100_bases AGTTATACTTTGTTTGTTTTATGAATGTACTAACTAAAACTGCTTATTTAAAGAATAATTGCCTTTATACAGTCCAAAAA TAGGAGAAGCAGGTAAATAA
Downstream 100 bases:
>100_bases GGGTGTAGGGGAGCAGAGGGAGCAGGGGAGCAGAGGAGCAGGGGAAGTAACGAGAATGAGTAATGACAATTGTACAGACG CGATTAATCGCGTCTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAESSEIGPHLTQQWLTEIQTLKQQLIEQQQERDAAWESAEKWRKLYNTEAEQRRTDTDFFRQTITSLKAEIQQLKGIDG QTLPDATTSVGVQQELAQIRTVEDLKAKLVEVIKERDRLRQALKTEQENHAQTRKSLTTALGDAIDSLAKERGRGGE
Sequences:
>Translated_157_residues MAESSEIGPHLTQQWLTEIQTLKQQLIEQQQERDAAWESAEKWRKLYNTEAEQRRTDTDFFRQTITSLKAEIQQLKGIDG QTLPDATTSVGVQQELAQIRTVEDLKAKLVEVIKERDRLRQALKTEQENHAQTRKSLTTALGDAIDSLAKERGRGGE >Mature_156_residues AESSEIGPHLTQQWLTEIQTLKQQLIEQQQERDAAWESAEKWRKLYNTEAEQRRTDTDFFRQTITSLKAEIQQLKGIDGQ TLPDATTSVGVQQELAQIRTVEDLKAKLVEVIKERDRLRQALKTEQENHAQTRKSLTTALGDAIDSLAKERGRGGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17944; Mature: 17813
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESSEIGPHLTQQWLTEIQTLKQQLIEQQQERDAAWESAEKWRKLYNTEAEQRRTDTDF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHH FRQTITSLKAEIQQLKGIDGQTLPDATTSVGVQQELAQIRTVEDLKAKLVEVIKERDRLR HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALKTEQENHAQTRKSLTTALGDAIDSLAKERGRGGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AESSEIGPHLTQQWLTEIQTLKQQLIEQQQERDAAWESAEKWRKLYNTEAEQRRTDTDF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHH FRQTITSLKAEIQQLKGIDGQTLPDATTSVGVQQELAQIRTVEDLKAKLVEVIKERDRLR HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALKTEQENHAQTRKSLTTALGDAIDSLAKERGRGGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA