Click here to switch to the map view.

The map label for this gene is 75909228

Identifier: 75909228

GI number: 75909228

Start: 3742366

End: 3742782

Strand: Direct

Name: 75909228

Synonym: Ava_3019

Alternate gene names: NA

Gene position: 3742366-3742782 (Clockwise)

Preceding gene: 75909227

Following gene: 75909229

Centisome position: 58.79

GC content: 41.25

Gene sequence:

>417_bases
ATGTCAATGCCCAATCATCCCAATCTTACCACCGCCGACGCGAAAAAAATCCTCAATAAATTCAACTGCTTAGATATCGC
CCCGATTCTCAAGCCATCAGAAAAAGAATCAGTTCGTCGGGCATTGATTTTGATCACCAAACTTTCTGACTATCAAATAT
TAGGAATTTGCGCCGATACAGCCGACGAAGGACTACTAGCTATGAAAACCTACTCTCACGCTTTAGGTTATGAAGTTCCT
ATTGATCTACCTGTAGTTGAAGGCCCAGTCTACATTAAATTAAATGGCAAAAATGGTCTGTGTTATCTCGACTCCTACGC
AGGACATCATCGCGGTGTCCTAGTATCATGCCAATCTTACTATGAAGGAGGAATTAACGAAATGTATGGACATCTACCCC
TCGACTTATTTGTTTAA

Upstream 100 bases:

>100_bases
GGGCAGTGTACCCTTTATCTTTAATTTAGGGAACACCCAAAATTTAAACTAATTGTCTACTCACACACAAACACAACTTA
GGAACATAATAAAGTCATTT

Downstream 100 bases:

>100_bases
AAGTTTAGATTTAATCTGAGGTACGCTACACTCAATAAGCGTACCTCTTCCTCCTCAAATCTTCTGACCTTTGCGCCTGG
GCGTGAGCTAAACAGTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSMPNHPNLTTADAKKILNKFNCLDIAPILKPSEKESVRRALILITKLSDYQILGICADTADEGLLAMKTYSHALGYEVP
IDLPVVEGPVYIKLNGKNGLCYLDSYAGHHRGVLVSCQSYYEGGINEMYGHLPLDLFV

Sequences:

>Translated_138_residues
MSMPNHPNLTTADAKKILNKFNCLDIAPILKPSEKESVRRALILITKLSDYQILGICADTADEGLLAMKTYSHALGYEVP
IDLPVVEGPVYIKLNGKNGLCYLDSYAGHHRGVLVSCQSYYEGGINEMYGHLPLDLFV
>Mature_137_residues
SMPNHPNLTTADAKKILNKFNCLDIAPILKPSEKESVRRALILITKLSDYQILGICADTADEGLLAMKTYSHALGYEVPI
DLPVVEGPVYIKLNGKNGLCYLDSYAGHHRGVLVSCQSYYEGGINEMYGHLPLDLFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15227; Mature: 15096

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPNHPNLTTADAKKILNKFNCLDIAPILKPSEKESVRRALILITKLSDYQILGICADT
CCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCHHHHHEEEEEEEECCCEEEEEEEECC
ADEGLLAMKTYSHALGYEVPIDLPVVEGPVYIKLNGKNGLCYLDSYAGHHRGVLVSCQSY
CCCCEEEEEEHHHHCCCCCCCCCEEECCCEEEEEECCCCEEEEECCCCCCCCEEEEEHHH
YEGGINEMYGHLPLDLFV
HCCCHHHHHCCCCEEEEC
>Mature Secondary Structure 
SMPNHPNLTTADAKKILNKFNCLDIAPILKPSEKESVRRALILITKLSDYQILGICADT
CCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCHHHHHEEEEEEEECCCEEEEEEEECC
ADEGLLAMKTYSHALGYEVPIDLPVVEGPVYIKLNGKNGLCYLDSYAGHHRGVLVSCQSY
CCCCEEEEEEHHHHCCCCCCCCCEEECCCEEEEEECCCCEEEEECCCCCCCCEEEEEHHH
YEGGINEMYGHLPLDLFV
HCCCHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA