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The map label for this gene is pecE [H]

Identifier: 75909138

GI number: 75909138

Start: 3634158

End: 3634919

Strand: Direct

Name: pecE [H]

Synonym: Ava_2928

Alternate gene names: 75909138

Gene position: 3634158-3634919 (Clockwise)

Preceding gene: 75909137

Following gene: 75909139

Centisome position: 57.09

GC content: 41.6

Gene sequence:

>762_bases
GTGACATCTGAACCAATTCTTTCTCCAGAAACAGCGATCGCTGCTTTATCTGATGAGGATAACCAAATTCGTTATTATGC
TGCTTGGTGGTTGGGTAAACATAACGTACAGGCTGGTTGTACAGCGCTATGTGCAGCCTTATTTGATGAACGCTATCGCA
TCCCACTAGGAGGGTATCCTCTGCGTCGTCAGGCTGCACGGGCCTTAGGAATGTTGAAAAATCCCCAAGCTGTACCAGCG
TTAATTGCAGCATTAAAATGTGATGAAGATTTACGTCTCAGGGAAGCAGTAATTTGCTCTTTAGCGGCGATCGGTGACAA
ACGAGCTGTGATTCCTTTGCTCAATCTTTTGCAATCAACTCAAGCACAACCTTATGAAGCTTTAATCGAAGCTTTAGCTA
CTCTACAAGTTTGGTCAGCCCGTCCACAAATTGAACCTTTTCTGAAGCATTATTCTGAGCGTGTGCAATGTGCAGCTGCT
CGATATTTGTACCTGCTAACCCAAGAATCTGAATACATTGAACGTATTGTCAAAAATCTCAATCACGACAATATGTATTT
ACGTTGGGCGGCGGTATTTGACTTGGGTGCAGTTGCTCATCAACAGGCAGTACAGGCAATCTTAGCGGCTCAGGTTCCTA
ATAGCTTAAAGCTCTTAAATTTAAAGCGTATTCTTGAAGCTATGTTGAACAACAATAGTGTTAATCAGGAAAAAGCATCT
GTATTATTTGGAGCAATTGATGATTTATTAATTCAACTTTAA

Upstream 100 bases:

>100_bases
AAAGATAGTCAAGATTTCCCAAGTGTAGAAATGGTTGCTAGATACCCGACTCCTTCAAGTCGGGTATCTGAGTAAATTTT
AAATTTCGGAGCGAAGTGAT

Downstream 100 bases:

>100_bases
AACTAATAACTGAATATTAAGGATTGGGGATTGGTCTGTTCTTACATCTCCAGTCCATTTTGTGCTGCATTGTTTTATCC
ACAAAGAAATTTATGAATCA

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTSEPILSPETAIAALSDEDNQIRYYAAWWLGKHNVQAGCTALCAALFDERYRIPLGGYPLRRQAARALGMLKNPQAVPA
LIAALKCDEDLRLREAVICSLAAIGDKRAVIPLLNLLQSTQAQPYEALIEALATLQVWSARPQIEPFLKHYSERVQCAAA
RYLYLLTQESEYIERIVKNLNHDNMYLRWAAVFDLGAVAHQQAVQAILAAQVPNSLKLLNLKRILEAMLNNNSVNQEKAS
VLFGAIDDLLIQL

Sequences:

>Translated_253_residues
MTSEPILSPETAIAALSDEDNQIRYYAAWWLGKHNVQAGCTALCAALFDERYRIPLGGYPLRRQAARALGMLKNPQAVPA
LIAALKCDEDLRLREAVICSLAAIGDKRAVIPLLNLLQSTQAQPYEALIEALATLQVWSARPQIEPFLKHYSERVQCAAA
RYLYLLTQESEYIERIVKNLNHDNMYLRWAAVFDLGAVAHQQAVQAILAAQVPNSLKLLNLKRILEAMLNNNSVNQEKAS
VLFGAIDDLLIQL
>Mature_252_residues
TSEPILSPETAIAALSDEDNQIRYYAAWWLGKHNVQAGCTALCAALFDERYRIPLGGYPLRRQAARALGMLKNPQAVPAL
IAALKCDEDLRLREAVICSLAAIGDKRAVIPLLNLLQSTQAQPYEALIEALATLQVWSARPQIEPFLKHYSERVQCAAAR
YLYLLTQESEYIERIVKNLNHDNMYLRWAAVFDLGAVAHQQAVQAILAAQVPNSLKLLNLKRILEAMLNNNSVNQEKASV
LFGAIDDLLIQL

Specific function: An enzyme involved in the biosynthesis of bilin [H]

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcE/RpcE/PecE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS [H]

EC number: 4.-.-.-

Molecular weight: Translated: 28192; Mature: 28061

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSEPILSPETAIAALSDEDNQIRYYAAWWLGKHNVQAGCTALCAALFDERYRIPLGGYP
CCCCCCCCCHHHHEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
LRRQAARALGMLKNPQAVPALIAALKCDEDLRLREAVICSLAAIGDKRAVIPLLNLLQST
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
QAQPYEALIEALATLQVWSARPQIEPFLKHYSERVQCAAARYLYLLTQESEYIERIVKNL
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHC
NHDNMYLRWAAVFDLGAVAHQQAVQAILAAQVPNSLKLLNLKRILEAMLNNNSVNQEKAS
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
VLFGAIDDLLIQL
HHHHHHHHHHHCC
>Mature Secondary Structure 
TSEPILSPETAIAALSDEDNQIRYYAAWWLGKHNVQAGCTALCAALFDERYRIPLGGYP
CCCCCCCCHHHHEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
LRRQAARALGMLKNPQAVPALIAALKCDEDLRLREAVICSLAAIGDKRAVIPLLNLLQST
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
QAQPYEALIEALATLQVWSARPQIEPFLKHYSERVQCAAARYLYLLTQESEYIERIVKNL
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHC
NHDNMYLRWAAVFDLGAVAHQQAVQAILAAQVPNSLKLLNLKRILEAMLNNNSVNQEKAS
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
VLFGAIDDLLIQL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1556083; 11759840 [H]