| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75909123
Identifier: 75909123
GI number: 75909123
Start: 3620987
End: 3621583
Strand: Direct
Name: 75909123
Synonym: Ava_2913
Alternate gene names: NA
Gene position: 3620987-3621583 (Clockwise)
Preceding gene: 75909115
Following gene: 75909124
Centisome position: 56.88
GC content: 48.91
Gene sequence:
>597_bases ATGCCCTCTGGTCGGACGCACGATCGCATTACTTTATGGGCGTTGCCGTTGGTAGCGGGTCTGACTTTCTGGCAGACTCG CTCTGGCAATGTCACTTTGTTGGTGGCTGGTGGGTTTATGTTTGGTGGGTTGATGTTCGGCCCCGATTTAGATATTTACT CGCGTCAATATCAGCGTTGGGGTTTTTTGCGCTGGATTTGGCTACCTTATCAAAAAAGTCTCCGGCATCGTTCTTTTTTA TCCCACGGGCCGCTAATTGGGACAACACTGCGGGTTGTCTATCTCAGCAGCTTGTTGGCTATCTTGACAGTTGTGATTTT GGCAGTTGCTGATAAGCTCTGGAATGTGACTGTGACATGGCAGGATGTAGAAGTGACAGTGGGGCGATCGCTCACTAGTT ACAGCATGGAATTCTGCGCTTTATTTTTGGGTCTGGAACTGGGGGCGATGAGTCATTCTCTCAGTGATTGGGGCGGTTCG GCTTACAAACGTTTCCGTAAGCAGGGGGTTCGGGGAATATTTCCTAGTAGCAAAATTAAGAAACGTAAGGTGACGAGTCG TCGGTCTACTGGCGGGAGAAAAAATCAAAAACGGTAA
Upstream 100 bases:
>100_bases AACCGCCCGTTCATTTCACTAACAATCAATATAGCAAAATATTTTGAATTACGCTAGTATTTTGAGGAAAATTTTTTTAA GTATTTTTGAGAACCTGTAA
Downstream 100 bases:
>100_bases TACTGGGAAATGCACAGGTACAAGGAGTATGGAATCAAATCATTTGGCAGCTTTGCAAGAATTAATTGAGGTGGTAGCGA AGTTGCGATCGCCTGATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPSGRTHDRITLWALPLVAGLTFWQTRSGNVTLLVAGGFMFGGLMFGPDLDIYSRQYQRWGFLRWIWLPYQKSLRHRSFL SHGPLIGTTLRVVYLSSLLAILTVVILAVADKLWNVTVTWQDVEVTVGRSLTSYSMEFCALFLGLELGAMSHSLSDWGGS AYKRFRKQGVRGIFPSSKIKKRKVTSRRSTGGRKNQKR
Sequences:
>Translated_198_residues MPSGRTHDRITLWALPLVAGLTFWQTRSGNVTLLVAGGFMFGGLMFGPDLDIYSRQYQRWGFLRWIWLPYQKSLRHRSFL SHGPLIGTTLRVVYLSSLLAILTVVILAVADKLWNVTVTWQDVEVTVGRSLTSYSMEFCALFLGLELGAMSHSLSDWGGS AYKRFRKQGVRGIFPSSKIKKRKVTSRRSTGGRKNQKR >Mature_197_residues PSGRTHDRITLWALPLVAGLTFWQTRSGNVTLLVAGGFMFGGLMFGPDLDIYSRQYQRWGFLRWIWLPYQKSLRHRSFLS HGPLIGTTLRVVYLSSLLAILTVVILAVADKLWNVTVTWQDVEVTVGRSLTSYSMEFCALFLGLELGAMSHSLSDWGGSA YKRFRKQGVRGIFPSSKIKKRKVTSRRSTGGRKNQKR
Specific function: Unknown
COG id: COG2389
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22445; Mature: 22313
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGRTHDRITLWALPLVAGLTFWQTRSGNVTLLVAGGFMFGGLMFGPDLDIYSRQYQRW CCCCCCCCEEHHHHHHHHHHHHHEEECCCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHC GFLRWIWLPYQKSLRHRSFLSHGPLIGTTLRVVYLSSLLAILTVVILAVADKLWNVTVTW CCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE QDVEVTVGRSLTSYSMEFCALFLGLELGAMSHSLSDWGGSAYKRFRKQGVRGIFPSSKIK EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHH KRKVTSRRSTGGRKNQKR HHHHHHHHCCCCCCCCCC >Mature Secondary Structure PSGRTHDRITLWALPLVAGLTFWQTRSGNVTLLVAGGFMFGGLMFGPDLDIYSRQYQRW CCCCCCCEEHHHHHHHHHHHHHEEECCCCEEEEEECHHHHCCCCCCCCCHHHHHHHHHC GFLRWIWLPYQKSLRHRSFLSHGPLIGTTLRVVYLSSLLAILTVVILAVADKLWNVTVTW CCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE QDVEVTVGRSLTSYSMEFCALFLGLELGAMSHSLSDWGGSAYKRFRKQGVRGIFPSSKIK EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHH KRKVTSRRSTGGRKNQKR HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA