| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is epsO [H]
Identifier: 75909115
GI number: 75909115
Start: 3610781
End: 3611884
Strand: Direct
Name: epsO [H]
Synonym: Ava_2905
Alternate gene names: 75909115
Gene position: 3610781-3611884 (Clockwise)
Preceding gene: 75909114
Following gene: 75909123
Centisome position: 56.72
GC content: 33.51
Gene sequence:
>1104_bases ATGATGAGTCTCTCTAGCGCAGAAACCATTAGAGCATCTCTTCACAATGCTTTAGGAAAAATAGAAAGTTTTAAATCGTG TGCGTTACTTGATTATCCAGATCATCCTAATATCGGAGATCATTTAATATGGCTTGGTGGGGTAATTTATCTGACCAATG TTATGAAAACCCAGATTAAATATACTTGTAGCCTACATAATTTCTCTCCAAAAACGTTGGAAGATAATATTGGTAAATCA CCCATAGTGTTTCATGGGGGTGGCAATTTAGGAGATTTATGGACTGAACAACAAAAATTTAGAGAAGGGATTATTTCCAA ATACCGCGATCGCCCGATTGTTATTCTACCCCAAAGTTTATATTTTAGGCATGAGGTTAACTTAATAAAAACAGCGAATA TATTTAATTCTCATCCTAATTTAACTATATTTCTGCGTGATGAACGTAGTTATAAAATAGCAAGAGAAGCTTTTGATAAG TGCCAAGTATTTAAGGCACCTGACATGGCTTTTCAGATGACGGACTTACAAGATATTTTCCATATTCAAAATAATAAATC ATCAATATTGTATCTTTCTAGAAAAGATAGAGAAATCAATCAAAAGCAATCAGAGAATATTTTTGATTTGCCTAATTTAG TAGTTGAAGATTGGATTGCCTATGAATGGAAGTTTGGACATCCTACGAAAAAATTAGCCAAGTACGTTTCTACTTTATAT AGAGAGGTATGGCAAAGGGGACTAGCTACTCCAATTGAATGGAATTCTCGACAAAAATGGCAAAATTCGTATCCATATGA AGTTGAATTCAATCATGTATATCAACCATCCATACATCAACTATCATGGAGTTTAATGCACAGTGGTGTTTATCAATTAA AGCAACATAGACTAGTTATAACCAATCGCTTACATGGACATATTATTTGTGTCCTTTTCAATATACCTCATGTATTTTTA CCAAACAGCTATTACAAGAATGAGGCTTTCTACGAAGAATGGACAAAAGAAATTCCTGATTGCAGGTTTATTAAGGATAC TTCCGAAGTAAAAATTGCTGTTGAAGAGCTATTAGCGTCAAGTACGGGTAAAGCAATCAATTAA
Upstream 100 bases:
>100_bases ATGCAGCAGAGTTTATAGAAAAATAAGATTTTTTGGCACCTTTAAATTAGGCGAATCTGTAGAAAAGTTTTTTGAACATA ATAAAATAACAAGTTAAAAT
Downstream 100 bases:
>100_bases TATGGCTGTTGAAGGATTTCAAGGCTTTGTATTGTCAGGGTTTTGTCTTAGCCTGATGCCCTAATGATCTCAAAAATGCG ACGTAGAGCTGATTCTCACA
Product: polysaccharide pyruvyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MMSLSSAETIRASLHNALGKIESFKSCALLDYPDHPNIGDHLIWLGGVIYLTNVMKTQIKYTCSLHNFSPKTLEDNIGKS PIVFHGGGNLGDLWTEQQKFREGIISKYRDRPIVILPQSLYFRHEVNLIKTANIFNSHPNLTIFLRDERSYKIAREAFDK CQVFKAPDMAFQMTDLQDIFHIQNNKSSILYLSRKDREINQKQSENIFDLPNLVVEDWIAYEWKFGHPTKKLAKYVSTLY REVWQRGLATPIEWNSRQKWQNSYPYEVEFNHVYQPSIHQLSWSLMHSGVYQLKQHRLVITNRLHGHIICVLFNIPHVFL PNSYYKNEAFYEEWTKEIPDCRFIKDTSEVKIAVEELLASSTGKAIN
Sequences:
>Translated_367_residues MMSLSSAETIRASLHNALGKIESFKSCALLDYPDHPNIGDHLIWLGGVIYLTNVMKTQIKYTCSLHNFSPKTLEDNIGKS PIVFHGGGNLGDLWTEQQKFREGIISKYRDRPIVILPQSLYFRHEVNLIKTANIFNSHPNLTIFLRDERSYKIAREAFDK CQVFKAPDMAFQMTDLQDIFHIQNNKSSILYLSRKDREINQKQSENIFDLPNLVVEDWIAYEWKFGHPTKKLAKYVSTLY REVWQRGLATPIEWNSRQKWQNSYPYEVEFNHVYQPSIHQLSWSLMHSGVYQLKQHRLVITNRLHGHIICVLFNIPHVFL PNSYYKNEAFYEEWTKEIPDCRFIKDTSEVKIAVEELLASSTGKAIN >Mature_367_residues MMSLSSAETIRASLHNALGKIESFKSCALLDYPDHPNIGDHLIWLGGVIYLTNVMKTQIKYTCSLHNFSPKTLEDNIGKS PIVFHGGGNLGDLWTEQQKFREGIISKYRDRPIVILPQSLYFRHEVNLIKTANIFNSHPNLTIFLRDERSYKIAREAFDK CQVFKAPDMAFQMTDLQDIFHIQNNKSSILYLSRKDREINQKQSENIFDLPNLVVEDWIAYEWKFGHPTKKLAKYVSTLY REVWQRGLATPIEWNSRQKWQNSYPYEVEFNHVYQPSIHQLSWSLMHSGVYQLKQHRLVITNRLHGHIICVLFNIPHVFL PNSYYKNEAFYEEWTKEIPDCRFIKDTSEVKIAVEELLASSTGKAIN
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG5039
COG function: function code GM; Exopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007345 [H]
Pfam domain/function: PF04230 PS_pyruv_trans [H]
EC number: NA
Molecular weight: Translated: 42916; Mature: 42916
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSLSSAETIRASLHNALGKIESFKSCALLDYPDHPNIGDHLIWLGGVIYLTNVMKTQIK CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEE YTCSLHNFSPKTLEDNIGKSPIVFHGGGNLGDLWTEQQKFREGIISKYRDRPIVILPQSL EEEEECCCCCCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCH YFRHEVNLIKTANIFNSHPNLTIFLRDERSYKIAREAFDKCQVFKAPDMAFQMTDLQDIF HHHHHCCEEEEEHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEECCCCCEEEHHHHHHHH HIQNNKSSILYLSRKDREINQKQSENIFDLPNLVVEDWIAYEWKFGHPTKKLAKYVSTLY HHCCCCCEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHH REVWQRGLATPIEWNSRQKWQNSYPYEVEFNHVYQPSIHQLSWSLMHSGVYQLKQHRLVI HHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCEEEE TNRLHGHIICVLFNIPHVFLPNSYYKNEAFYEEWTKEIPDCRFIKDTSEVKIAVEELLAS EECCCCEEEEEEECCCEEECCCCHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHC STGKAIN CCCCCCC >Mature Secondary Structure MMSLSSAETIRASLHNALGKIESFKSCALLDYPDHPNIGDHLIWLGGVIYLTNVMKTQIK CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEE YTCSLHNFSPKTLEDNIGKSPIVFHGGGNLGDLWTEQQKFREGIISKYRDRPIVILPQSL EEEEECCCCCCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCH YFRHEVNLIKTANIFNSHPNLTIFLRDERSYKIAREAFDKCQVFKAPDMAFQMTDLQDIF HHHHHCCEEEEEHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEECCCCCEEEHHHHHHHH HIQNNKSSILYLSRKDREINQKQSENIFDLPNLVVEDWIAYEWKFGHPTKKLAKYVSTLY HHCCCCCEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHH REVWQRGLATPIEWNSRQKWQNSYPYEVEFNHVYQPSIHQLSWSLMHSGVYQLKQHRLVI HHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCEEEE TNRLHGHIICVLFNIPHVFLPNSYYKNEAFYEEWTKEIPDCRFIKDTSEVKIAVEELLAS EECCCCEEEEEEECCCEEECCCCHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHC STGKAIN CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]