Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

Click here to switch to the map view.

The map label for this gene is epsO [H]

Identifier: 75909115

GI number: 75909115

Start: 3610781

End: 3611884

Strand: Direct

Name: epsO [H]

Synonym: Ava_2905

Alternate gene names: 75909115

Gene position: 3610781-3611884 (Clockwise)

Preceding gene: 75909114

Following gene: 75909123

Centisome position: 56.72

GC content: 33.51

Gene sequence:

>1104_bases
ATGATGAGTCTCTCTAGCGCAGAAACCATTAGAGCATCTCTTCACAATGCTTTAGGAAAAATAGAAAGTTTTAAATCGTG
TGCGTTACTTGATTATCCAGATCATCCTAATATCGGAGATCATTTAATATGGCTTGGTGGGGTAATTTATCTGACCAATG
TTATGAAAACCCAGATTAAATATACTTGTAGCCTACATAATTTCTCTCCAAAAACGTTGGAAGATAATATTGGTAAATCA
CCCATAGTGTTTCATGGGGGTGGCAATTTAGGAGATTTATGGACTGAACAACAAAAATTTAGAGAAGGGATTATTTCCAA
ATACCGCGATCGCCCGATTGTTATTCTACCCCAAAGTTTATATTTTAGGCATGAGGTTAACTTAATAAAAACAGCGAATA
TATTTAATTCTCATCCTAATTTAACTATATTTCTGCGTGATGAACGTAGTTATAAAATAGCAAGAGAAGCTTTTGATAAG
TGCCAAGTATTTAAGGCACCTGACATGGCTTTTCAGATGACGGACTTACAAGATATTTTCCATATTCAAAATAATAAATC
ATCAATATTGTATCTTTCTAGAAAAGATAGAGAAATCAATCAAAAGCAATCAGAGAATATTTTTGATTTGCCTAATTTAG
TAGTTGAAGATTGGATTGCCTATGAATGGAAGTTTGGACATCCTACGAAAAAATTAGCCAAGTACGTTTCTACTTTATAT
AGAGAGGTATGGCAAAGGGGACTAGCTACTCCAATTGAATGGAATTCTCGACAAAAATGGCAAAATTCGTATCCATATGA
AGTTGAATTCAATCATGTATATCAACCATCCATACATCAACTATCATGGAGTTTAATGCACAGTGGTGTTTATCAATTAA
AGCAACATAGACTAGTTATAACCAATCGCTTACATGGACATATTATTTGTGTCCTTTTCAATATACCTCATGTATTTTTA
CCAAACAGCTATTACAAGAATGAGGCTTTCTACGAAGAATGGACAAAAGAAATTCCTGATTGCAGGTTTATTAAGGATAC
TTCCGAAGTAAAAATTGCTGTTGAAGAGCTATTAGCGTCAAGTACGGGTAAAGCAATCAATTAA

Upstream 100 bases:

>100_bases
ATGCAGCAGAGTTTATAGAAAAATAAGATTTTTTGGCACCTTTAAATTAGGCGAATCTGTAGAAAAGTTTTTTGAACATA
ATAAAATAACAAGTTAAAAT

Downstream 100 bases:

>100_bases
TATGGCTGTTGAAGGATTTCAAGGCTTTGTATTGTCAGGGTTTTGTCTTAGCCTGATGCCCTAATGATCTCAAAAATGCG
ACGTAGAGCTGATTCTCACA

Product: polysaccharide pyruvyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MMSLSSAETIRASLHNALGKIESFKSCALLDYPDHPNIGDHLIWLGGVIYLTNVMKTQIKYTCSLHNFSPKTLEDNIGKS
PIVFHGGGNLGDLWTEQQKFREGIISKYRDRPIVILPQSLYFRHEVNLIKTANIFNSHPNLTIFLRDERSYKIAREAFDK
CQVFKAPDMAFQMTDLQDIFHIQNNKSSILYLSRKDREINQKQSENIFDLPNLVVEDWIAYEWKFGHPTKKLAKYVSTLY
REVWQRGLATPIEWNSRQKWQNSYPYEVEFNHVYQPSIHQLSWSLMHSGVYQLKQHRLVITNRLHGHIICVLFNIPHVFL
PNSYYKNEAFYEEWTKEIPDCRFIKDTSEVKIAVEELLASSTGKAIN

Sequences:

>Translated_367_residues
MMSLSSAETIRASLHNALGKIESFKSCALLDYPDHPNIGDHLIWLGGVIYLTNVMKTQIKYTCSLHNFSPKTLEDNIGKS
PIVFHGGGNLGDLWTEQQKFREGIISKYRDRPIVILPQSLYFRHEVNLIKTANIFNSHPNLTIFLRDERSYKIAREAFDK
CQVFKAPDMAFQMTDLQDIFHIQNNKSSILYLSRKDREINQKQSENIFDLPNLVVEDWIAYEWKFGHPTKKLAKYVSTLY
REVWQRGLATPIEWNSRQKWQNSYPYEVEFNHVYQPSIHQLSWSLMHSGVYQLKQHRLVITNRLHGHIICVLFNIPHVFL
PNSYYKNEAFYEEWTKEIPDCRFIKDTSEVKIAVEELLASSTGKAIN
>Mature_367_residues
MMSLSSAETIRASLHNALGKIESFKSCALLDYPDHPNIGDHLIWLGGVIYLTNVMKTQIKYTCSLHNFSPKTLEDNIGKS
PIVFHGGGNLGDLWTEQQKFREGIISKYRDRPIVILPQSLYFRHEVNLIKTANIFNSHPNLTIFLRDERSYKIAREAFDK
CQVFKAPDMAFQMTDLQDIFHIQNNKSSILYLSRKDREINQKQSENIFDLPNLVVEDWIAYEWKFGHPTKKLAKYVSTLY
REVWQRGLATPIEWNSRQKWQNSYPYEVEFNHVYQPSIHQLSWSLMHSGVYQLKQHRLVITNRLHGHIICVLFNIPHVFL
PNSYYKNEAFYEEWTKEIPDCRFIKDTSEVKIAVEELLASSTGKAIN

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG5039

COG function: function code GM; Exopolysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007345 [H]

Pfam domain/function: PF04230 PS_pyruv_trans [H]

EC number: NA

Molecular weight: Translated: 42916; Mature: 42916

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSLSSAETIRASLHNALGKIESFKSCALLDYPDHPNIGDHLIWLGGVIYLTNVMKTQIK
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEE
YTCSLHNFSPKTLEDNIGKSPIVFHGGGNLGDLWTEQQKFREGIISKYRDRPIVILPQSL
EEEEECCCCCCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCH
YFRHEVNLIKTANIFNSHPNLTIFLRDERSYKIAREAFDKCQVFKAPDMAFQMTDLQDIF
HHHHHCCEEEEEHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEECCCCCEEEHHHHHHHH
HIQNNKSSILYLSRKDREINQKQSENIFDLPNLVVEDWIAYEWKFGHPTKKLAKYVSTLY
HHCCCCCEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
REVWQRGLATPIEWNSRQKWQNSYPYEVEFNHVYQPSIHQLSWSLMHSGVYQLKQHRLVI
HHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCEEEE
TNRLHGHIICVLFNIPHVFLPNSYYKNEAFYEEWTKEIPDCRFIKDTSEVKIAVEELLAS
EECCCCEEEEEEECCCEEECCCCHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHC
STGKAIN
CCCCCCC
>Mature Secondary Structure
MMSLSSAETIRASLHNALGKIESFKSCALLDYPDHPNIGDHLIWLGGVIYLTNVMKTQIK
CCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEE
YTCSLHNFSPKTLEDNIGKSPIVFHGGGNLGDLWTEQQKFREGIISKYRDRPIVILPQSL
EEEEECCCCCCCHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCH
YFRHEVNLIKTANIFNSHPNLTIFLRDERSYKIAREAFDKCQVFKAPDMAFQMTDLQDIF
HHHHHCCEEEEEHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEECCCCCEEEHHHHHHHH
HIQNNKSSILYLSRKDREINQKQSENIFDLPNLVVEDWIAYEWKFGHPTKKLAKYVSTLY
HHCCCCCEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
REVWQRGLATPIEWNSRQKWQNSYPYEVEFNHVYQPSIHQLSWSLMHSGVYQLKQHRLVI
HHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCEEEE
TNRLHGHIICVLFNIPHVFLPNSYYKNEAFYEEWTKEIPDCRFIKDTSEVKIAVEELLAS
EECCCCEEEEEEECCCEEECCCCHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHC
STGKAIN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]