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The map label for this gene is 75909000

Identifier: 75909000

GI number: 75909000

Start: 3441135

End: 3442325

Strand: Direct

Name: 75909000

Synonym: Ava_2788

Alternate gene names: NA

Gene position: 3441135-3442325 (Clockwise)

Preceding gene: 75908999

Following gene: 75909003

Centisome position: 54.06

GC content: 43.41

Gene sequence:

>1191_bases
ATGCCTAGCCTCAAACTCTCGCTGACTGGATTGCAAATCATCAAACAAGCTCGAAGCGAAAAAGGTTGGACAATTGATAA
TCCATGTTGGTTAGAACAAGCAAGTCAAGTGCTTGAGCCTGGGCGTAACTGGGAAAATGCGGAGGTTTTTGCAGCCGGGG
TATCTTTAGCCACCTGGAAACGCTTCCTCAAAGGTGATGCGATCGATGCGTCGGTATTTAAAGCCTTTTGTCAGGTTTTG
GGATTGAATTGGCAAGACTTAGTGGAACGTCCCCCTAACTCATTCATCATTGGGACAACCCAAATCCCCAATATTCCCTT
ATTTTTTGGACGACGTTATGAACTGACAACACTCAGCCAAGCAATTGAACAAGGAACACGCCTAATTGCTATTACAGGGA
TTGGGGGTATGGGGAAAACGGCTTTAGCCACAAAGTTAGTAGAAAGCAGGTCATCTCATTTTTCTCAAACCCTATGGTTT
TCGTTTCACCACAACCCACCTGCCAAGGATAAAATACCAACTTTAGTACCACAAACCCTGATGGTTTTTGATGGTTGGGA
TGGCATTTTGGGGGGTAATCGAGGGGGACAATATCGCCCAGAATATGAACCATACGCAGATTTTCTCCGCACAGTGGTAC
AAACTACTCATACTAGTTGTGTAATTATCACTAGCCGAGAACAACCAGAAGGGTTAAATATTTTAGGCGCTGGGGGTGCA
GTGATTTTCCCCCTTGGTGGACTAATGGAAGGTGCTATTGAGCTTTTGCAGCATCATCAACTGACTTTTAATGCTCAACA
GTGGATTACGCTAGTCAATCAATATGGTGGTAATCCCTTATTTCTCAATATGGCGGCTAATTTCATTCATGAATTATTTG
CTGGGGATGTGGGAGAGTTTTTAGCTTCTGGAACCTTAGTGGCTGGAGAATTTGCCCCCCTCGTAACACAATGGCTGAAG
CAGATTTCTACTTTAGAACAAATACTGATCAAATCTTTGGCTACAAAGGTGCAAGGATTCACTCGCCAAGAGATACTACT
ACACTTAGCAAGTCGCGCTGCCAATGGGGATATTTTAGCAGCGCTCTTATCTTTAAAGCGAAGAGGGTTGATAGAAACGA
TGAAAGATGGTGAATTAGAACGCTTTTATTTACAGCCTGTCATTCTCAAGTGTGTGCAGCGTTTATTTTAA

Upstream 100 bases:

>100_bases
TGATTTTAGGGCGATTTTTCTAGGCGATCGCTCCCATAGTTTTCCAGACTAATCTAGAATTAGACTGGATGAATTTGCTA
CACCTTGCCACTCATATCCG

Downstream 100 bases:

>100_bases
CCACCACCACCGCCGCCACCGCCGCCACCACCGCCACCACCGCCACCACCACCACCACCACCTCCTCCTCCTCCTCCTCC
TCCATCACTGCTTCCATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MPSLKLSLTGLQIIKQARSEKGWTIDNPCWLEQASQVLEPGRNWENAEVFAAGVSLATWKRFLKGDAIDASVFKAFCQVL
GLNWQDLVERPPNSFIIGTTQIPNIPLFFGRRYELTTLSQAIEQGTRLIAITGIGGMGKTALATKLVESRSSHFSQTLWF
SFHHNPPAKDKIPTLVPQTLMVFDGWDGILGGNRGGQYRPEYEPYADFLRTVVQTTHTSCVIITSREQPEGLNILGAGGA
VIFPLGGLMEGAIELLQHHQLTFNAQQWITLVNQYGGNPLFLNMAANFIHELFAGDVGEFLASGTLVAGEFAPLVTQWLK
QISTLEQILIKSLATKVQGFTRQEILLHLASRAANGDILAALLSLKRRGLIETMKDGELERFYLQPVILKCVQRLF

Sequences:

>Translated_396_residues
MPSLKLSLTGLQIIKQARSEKGWTIDNPCWLEQASQVLEPGRNWENAEVFAAGVSLATWKRFLKGDAIDASVFKAFCQVL
GLNWQDLVERPPNSFIIGTTQIPNIPLFFGRRYELTTLSQAIEQGTRLIAITGIGGMGKTALATKLVESRSSHFSQTLWF
SFHHNPPAKDKIPTLVPQTLMVFDGWDGILGGNRGGQYRPEYEPYADFLRTVVQTTHTSCVIITSREQPEGLNILGAGGA
VIFPLGGLMEGAIELLQHHQLTFNAQQWITLVNQYGGNPLFLNMAANFIHELFAGDVGEFLASGTLVAGEFAPLVTQWLK
QISTLEQILIKSLATKVQGFTRQEILLHLASRAANGDILAALLSLKRRGLIETMKDGELERFYLQPVILKCVQRLF
>Mature_395_residues
PSLKLSLTGLQIIKQARSEKGWTIDNPCWLEQASQVLEPGRNWENAEVFAAGVSLATWKRFLKGDAIDASVFKAFCQVLG
LNWQDLVERPPNSFIIGTTQIPNIPLFFGRRYELTTLSQAIEQGTRLIAITGIGGMGKTALATKLVESRSSHFSQTLWFS
FHHNPPAKDKIPTLVPQTLMVFDGWDGILGGNRGGQYRPEYEPYADFLRTVVQTTHTSCVIITSREQPEGLNILGAGGAV
IFPLGGLMEGAIELLQHHQLTFNAQQWITLVNQYGGNPLFLNMAANFIHELFAGDVGEFLASGTLVAGEFAPLVTQWLKQ
ISTLEQILIKSLATKVQGFTRQEILLHLASRAANGDILAALLSLKRRGLIETMKDGELERFYLQPVILKCVQRLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 43861; Mature: 43730

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLKLSLTGLQIIKQARSEKGWTIDNPCWLEQASQVLEPGRNWENAEVFAAGVSLATWK
CCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHH
RFLKGDAIDASVFKAFCQVLGLNWQDLVERPPNSFIIGTTQIPNIPLFFGRRYELTTLSQ
HHHCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCEEECCCCHHHHHHH
AIEQGTRLIAITGIGGMGKTALATKLVESRSSHFSQTLWFSFHHNPPAKDKIPTLVPQTL
HHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHH
MVFDGWDGILGGNRGGQYRPEYEPYADFLRTVVQTTHTSCVIITSREQPEGLNILGAGGA
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCE
VIFPLGGLMEGAIELLQHHQLTFNAQQWITLVNQYGGNPLFLNMAANFIHELFAGDVGEF
EEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHH
LASGTLVAGEFAPLVTQWLKQISTLEQILIKSLATKVQGFTRQEILLHLASRAANGDILA
HHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
ALLSLKRRGLIETMKDGELERFYLQPVILKCVQRLF
HHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PSLKLSLTGLQIIKQARSEKGWTIDNPCWLEQASQVLEPGRNWENAEVFAAGVSLATWK
CCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHH
RFLKGDAIDASVFKAFCQVLGLNWQDLVERPPNSFIIGTTQIPNIPLFFGRRYELTTLSQ
HHHCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCCCCCEEECCCCHHHHHHH
AIEQGTRLIAITGIGGMGKTALATKLVESRSSHFSQTLWFSFHHNPPAKDKIPTLVPQTL
HHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHH
MVFDGWDGILGGNRGGQYRPEYEPYADFLRTVVQTTHTSCVIITSREQPEGLNILGAGGA
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCE
VIFPLGGLMEGAIELLQHHQLTFNAQQWITLVNQYGGNPLFLNMAANFIHELFAGDVGEF
EEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHH
LASGTLVAGEFAPLVTQWLKQISTLEQILIKSLATKVQGFTRQEILLHLASRAANGDILA
HHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHH
ALLSLKRRGLIETMKDGELERFYLQPVILKCVQRLF
HHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]