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The map label for this gene is 75908990

Identifier: 75908990

GI number: 75908990

Start: 3432126

End: 3433355

Strand: Direct

Name: 75908990

Synonym: Ava_2778

Alternate gene names: NA

Gene position: 3432126-3433355 (Clockwise)

Preceding gene: 75908987

Following gene: 75908999

Centisome position: 53.92

GC content: 43.25

Gene sequence:

>1230_bases
ATGCAAGAAACGCAAAGCTTTTCCAAGAGAATAGATAATTCGCTTAATACATCTTTTGCAAGATCAGCATCTTTGGTATC
GAGTGCTTATGTAAGTGATTTAAATACTGAGCTACCATCATCTAGTAATAGCTCTGCAACAACACAAGTAGATTTGCCAA
TTTCCATTCCTGGTTTGAGTGCCAACCCAAATCCTAATCCTTACTTAACTAGCGCAGCAATTTCACCTGATTTCAACGGC
GATGGTAAGGCAGATAAGGTTTGGGTTAATACTCAAACAGGTGAAATTAGAGTGAGGTTGATGAACGGAACAGTCACTCA
AGAAGAAGCCTCTTTAGGAACATTTGATCTGAGTGTCTGGACTTATAAAATCGCTGACTTTAACAGTGATGGCAAGACTG
ACTTCCTGTTACGGAACAATGCAACAGGCGAGAATGCGATTGCGATCATGGATGGAGCTAGAGTTGCTAACTTTGTTTAT
CTAGACAAAGTTGATCCAGGTTGGAATGCTAGCATCGGTGATTTTAACGGCGATCGCAAAACCGACATCCACTGGAATAA
TACTCAAACAGGTGAAAATGCAATTTGGCTGATGGATGGCACAACCGTTGTCAGTGCCAATGTTCTGGATACCACAACCC
CAGGGTTGAGTGCCACTATTGTTGACTTCGACGGAAACGGTAAGAGTGATATCTTCTGGCGAGATACAACCACAGGTGCA
AACTCCGTTTGGTTTATGGATGGTATCCAAGCTACCAAGTATGATCTACAAGCACAAGACGCATCTTGGTCTTACAGCCT
TGGCGATTTCAACGGTGACTTCACTACTGATCTTCTCTGGCGTAATACCGTCACTGGTGAAAACAAAATTTGGACAATGA
ATGGCATTTTTGTCACTGAAGGTACTTTAAACACCCTCAGTTCCGATTGGACAGCCAACATTGGTGATTTCAATGGTGAT
GGCCGCACCGATATCTTCTGGAACAACACTACAACTGGTGCAAACACTGCTTGGTTAATGAATGGTACATCCGTTACCAG
TGAAGCCTTTCTACCAAGTAGAAGTCCAGGTTCTAAGGCGTATATTGGCGATTATAACAGCGATGGCAAATCTGATATTT
ACTGGCGTGATCAGGCAACCGGTACAGATGCCATCTGGACTATGGATGGTACCTTGGCTACTGAAACTCCTGTTACAGAT
GCTCTGACTCCAGAGTGGTACACAGCTTAG

Upstream 100 bases:

>100_bases
GATACAATATTTTTTTAACTTGGAATAATGTTATTAACTGACAGAAACCAACATAAATTTTCAGCTAAAACTTTTAAGAC
AACAAGTTTAAGAAACCATC

Downstream 100 bases:

>100_bases
GGGTGTAGGGGGGTAGGGGTTTAGGGGTTTAGGGAAGAGACATTTACCCAGTCCCCAACCCCCAATCCCCAATCCCCTCA
TTAAAACTTGTAACTCAAAA

Product: Integrins subunit alpha

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MQETQSFSKRIDNSLNTSFARSASLVSSAYVSDLNTELPSSSNSSATTQVDLPISIPGLSANPNPNPYLTSAAISPDFNG
DGKADKVWVNTQTGEIRVRLMNGTVTQEEASLGTFDLSVWTYKIADFNSDGKTDFLLRNNATGENAIAIMDGARVANFVY
LDKVDPGWNASIGDFNGDRKTDIHWNNTQTGENAIWLMDGTTVVSANVLDTTTPGLSATIVDFDGNGKSDIFWRDTTTGA
NSVWFMDGIQATKYDLQAQDASWSYSLGDFNGDFTTDLLWRNTVTGENKIWTMNGIFVTEGTLNTLSSDWTANIGDFNGD
GRTDIFWNNTTTGANTAWLMNGTSVTSEAFLPSRSPGSKAYIGDYNSDGKSDIYWRDQATGTDAIWTMDGTLATETPVTD
ALTPEWYTA

Sequences:

>Translated_409_residues
MQETQSFSKRIDNSLNTSFARSASLVSSAYVSDLNTELPSSSNSSATTQVDLPISIPGLSANPNPNPYLTSAAISPDFNG
DGKADKVWVNTQTGEIRVRLMNGTVTQEEASLGTFDLSVWTYKIADFNSDGKTDFLLRNNATGENAIAIMDGARVANFVY
LDKVDPGWNASIGDFNGDRKTDIHWNNTQTGENAIWLMDGTTVVSANVLDTTTPGLSATIVDFDGNGKSDIFWRDTTTGA
NSVWFMDGIQATKYDLQAQDASWSYSLGDFNGDFTTDLLWRNTVTGENKIWTMNGIFVTEGTLNTLSSDWTANIGDFNGD
GRTDIFWNNTTTGANTAWLMNGTSVTSEAFLPSRSPGSKAYIGDYNSDGKSDIYWRDQATGTDAIWTMDGTLATETPVTD
ALTPEWYTA
>Mature_409_residues
MQETQSFSKRIDNSLNTSFARSASLVSSAYVSDLNTELPSSSNSSATTQVDLPISIPGLSANPNPNPYLTSAAISPDFNG
DGKADKVWVNTQTGEIRVRLMNGTVTQEEASLGTFDLSVWTYKIADFNSDGKTDFLLRNNATGENAIAIMDGARVANFVY
LDKVDPGWNASIGDFNGDRKTDIHWNNTQTGENAIWLMDGTTVVSANVLDTTTPGLSATIVDFDGNGKSDIFWRDTTTGA
NSVWFMDGIQATKYDLQAQDASWSYSLGDFNGDFTTDLLWRNTVTGENKIWTMNGIFVTEGTLNTLSSDWTANIGDFNGD
GRTDIFWNNTTTGANTAWLMNGTSVTSEAFLPSRSPGSKAYIGDYNSDGKSDIYWRDQATGTDAIWTMDGTLATETPVTD
ALTPEWYTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44459; Mature: 44459

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQETQSFSKRIDNSLNTSFARSASLVSSAYVSDLNTELPSSSNSSATTQVDLPISIPGLS
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC
ANPNPNPYLTSAAISPDFNGDGKADKVWVNTQTGEIRVRLMNGTVTQEEASLGTFDLSVW
CCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEE
TYKIADFNSDGKTDFLLRNNATGENAIAIMDGARVANFVYLDKVDPGWNASIGDFNGDRK
EEEEEECCCCCCEEEEEECCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCE
TDIHWNNTQTGENAIWLMDGTTVVSANVLDTTTPGLSATIVDFDGNGKSDIFWRDTTTGA
EEEEECCCCCCCCEEEEEECCEEEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCC
NSVWFMDGIQATKYDLQAQDASWSYSLGDFNGDFTTDLLWRNTVTGENKIWTMNGIFVTE
CEEEEECCCEEEEEEEEECCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEECCEEEEC
GTLNTLSSDWTANIGDFNGDGRTDIFWNNTTTGANTAWLMNGTSVTSEAFLPSRSPGSKA
CCHHHCCCCCEECCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHCCCCCCCCCEE
YIGDYNSDGKSDIYWRDQATGTDAIWTMDGTLATETPVTDALTPEWYTA
EEECCCCCCCCCEEECCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQETQSFSKRIDNSLNTSFARSASLVSSAYVSDLNTELPSSSNSSATTQVDLPISIPGLS
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC
ANPNPNPYLTSAAISPDFNGDGKADKVWVNTQTGEIRVRLMNGTVTQEEASLGTFDLSVW
CCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEE
TYKIADFNSDGKTDFLLRNNATGENAIAIMDGARVANFVYLDKVDPGWNASIGDFNGDRK
EEEEEECCCCCCEEEEEECCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCE
TDIHWNNTQTGENAIWLMDGTTVVSANVLDTTTPGLSATIVDFDGNGKSDIFWRDTTTGA
EEEEECCCCCCCCEEEEEECCEEEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCC
NSVWFMDGIQATKYDLQAQDASWSYSLGDFNGDFTTDLLWRNTVTGENKIWTMNGIFVTE
CEEEEECCCEEEEEEEEECCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEECCEEEEC
GTLNTLSSDWTANIGDFNGDGRTDIFWNNTTTGANTAWLMNGTSVTSEAFLPSRSPGSKA
CCHHHCCCCCEECCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHCCCCCCCCCEE
YIGDYNSDGKSDIYWRDQATGTDAIWTMDGTLATETPVTDALTPEWYTA
EEECCCCCCCCCEEECCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA