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The map label for this gene is ydjX [C]

Identifier: 75908987

GI number: 75908987

Start: 3428542

End: 3429294

Strand: Direct

Name: ydjX [C]

Synonym: Ava_2775

Alternate gene names: 75908987

Gene position: 3428542-3429294 (Clockwise)

Preceding gene: 75908983

Following gene: 75908990

Centisome position: 53.86

GC content: 36.79

Gene sequence:

>753_bases
ATGGTTCCCAAAGAGCAGACTCGATTCAATAGGAAACATAAACTATTACTTATGGGTTTGGCAATTGCTGTGCTGATAGT
TATAGCACGACAATTTAACATTCAGTCACTTTTTCAAACATTAATATTTTGGGTGCAAAGCCTGGGATTTTTTGGGCCGA
TCGCCTACATAATTATTTACAATCTGGCAACGTTATTATTTATCCCAGGTTCTATATTGACCTTAAAAAGTGGTTGTTTA
TTTGGTGTATTTTGGGGTTCAGTTTATGTATTAATAGCAGCAACTACGGGTGCAATATTAGCTTTCATCATCGGACGATA
TCTGTCACGGGATTGGGTTGTGCGACAGATAGACAAGTATCCAAAGTTTAAAATGATTGATCAGGCTGTAGCCAAGGAAG
GATGGAAAATTGTGCTGTTAACTCGCCTTTCTCCGGTCTTTCCTTTTAATTTATTGAACTATGCTTTTGGTATAACTTGT
ATATCTTTAAAAGACTATATATTAGGTTCCTTGGGCATTATACCTGGGACTATAATGTATGTTTATATTGGTTCTTTAGC
TGGTGATTTAGCTCTGGCAGGTACGAATCATCAAGCAGTTACACCGGAAACACAAATTTGGCAATGGATAATGCAAGGAT
TGGGACTGATAGCAACTGTGGGTGTGACTGTATATATCACTAAAATTGCACAAAAAGCTTTATCTCAAAAAGTGGTAACA
GAGGAAATAATCAAGAGTCAGGATACGAATTGA

Upstream 100 bases:

>100_bases
AGGTGGTGATAAAAGCAAGTTCAGGAATCTTTTGCTGGTTGGTTGTTGTATGACATTATCCTTAACTATTTAAAGTAACG
CTGAAAACTGAGGTAATTTA

Downstream 100 bases:

>100_bases
AAATTAAGCATTCAACAAGAACTTTATAGTTAAAATTGCAGATTTGGTATTAAGTACAACAGGGTAAATAATTAAAGGTT
TGCAGTGAGAACTAAAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MVPKEQTRFNRKHKLLLMGLAIAVLIVIARQFNIQSLFQTLIFWVQSLGFFGPIAYIIIYNLATLLFIPGSILTLKSGCL
FGVFWGSVYVLIAATTGAILAFIIGRYLSRDWVVRQIDKYPKFKMIDQAVAKEGWKIVLLTRLSPVFPFNLLNYAFGITC
ISLKDYILGSLGIIPGTIMYVYIGSLAGDLALAGTNHQAVTPETQIWQWIMQGLGLIATVGVTVYITKIAQKALSQKVVT
EEIIKSQDTN

Sequences:

>Translated_250_residues
MVPKEQTRFNRKHKLLLMGLAIAVLIVIARQFNIQSLFQTLIFWVQSLGFFGPIAYIIIYNLATLLFIPGSILTLKSGCL
FGVFWGSVYVLIAATTGAILAFIIGRYLSRDWVVRQIDKYPKFKMIDQAVAKEGWKIVLLTRLSPVFPFNLLNYAFGITC
ISLKDYILGSLGIIPGTIMYVYIGSLAGDLALAGTNHQAVTPETQIWQWIMQGLGLIATVGVTVYITKIAQKALSQKVVT
EEIIKSQDTN
>Mature_250_residues
MVPKEQTRFNRKHKLLLMGLAIAVLIVIARQFNIQSLFQTLIFWVQSLGFFGPIAYIIIYNLATLLFIPGSILTLKSGCL
FGVFWGSVYVLIAATTGAILAFIIGRYLSRDWVVRQIDKYPKFKMIDQAVAKEGWKIVLLTRLSPVFPFNLLNYAFGITC
ISLKDYILGSLGIIPGTIMYVYIGSLAGDLALAGTNHQAVTPETQIWQWIMQGLGLIATVGVTVYITKIAQKALSQKVVT
EEIIKSQDTN

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Homo sapiens, GI223555958, Length=214, Percent_Identity=25.2336448598131, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI87081964, Length=192, Percent_Identity=36.4583333333333, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1788049, Length=120, Percent_Identity=31.6666666666667, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 27826; Mature: 27826

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCC
>Mature Secondary Structure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HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]