| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908955
Identifier: 75908955
GI number: 75908955
Start: 3383600
End: 3385075
Strand: Direct
Name: 75908955
Synonym: Ava_2743
Alternate gene names: NA
Gene position: 3383600-3385075 (Clockwise)
Preceding gene: 75908952
Following gene: 75908963
Centisome position: 53.15
GC content: 42.82
Gene sequence:
>1476_bases ATGTCTTACGTCTCCCTGTTAAAAAATATACCAGACATCTTAGGACAGCCAACTGGGATAGCTGCAATAGCCTCTCTTGG CATCCACGGTGCCATTGCGTTGATTGTGCCATTGATGCCAGTTGATTCTAATAAATCTAATGAATCATCACCAAAATCAG TTGGTGTTTTAGAACTCAGTCAAGCAGACCAAAGCCGTTTACCACAAAGTGCAGATCCAAATCAAGTTGGTCTGCAAGCA CAACTCCCTCTACAATCACAATTTCCGCAACAACCACAACTAGGTAATATTACTAGCTTTAATAATCAGACAGCTGTTTT ACCTCCTTTACCGCCACCGATTACCCCACCAATTTCACTACCACCGGTTTACACAACCCCTGATAATTATCGCATTGCCT CCTTACCCAGAAGCCAACCTCTGAGGCAGTCACCCAGAAGGGATTTGCGATTTGATAACTCCGGTTTTAGCGCTATTGGA GAAAAATTTACCCCAACAACCCCTCCCAGTTTTAATGAGAGGGAAGTAATACCAGAAACATCTAGGTCTCTACCTGTAGA TAGATTACCGGAATTAAATGCGGCAAAACTCCCCGATGATTTACCGCCCAATCCCCCCAGTAATACAAATCCACCAGTGG CTGATTCTGGTAGTAATGCAGCGACAGTGGCTCCAATAGAACCCCAGGTAGCTCCTATTGTCCAAGCTCCCAAAGCGGGT GATAATTTAGCTTTTGCTAACGAAAGTATTCCCCAATGGCAGCAAGGCTCTACACTCAAAACACCAGAATTACCTTGGCA GAATCCTCAACAAAGATCAGAACAAGGATTGATTGCTCAGGTAAACTCATACGAAGACCTACGTAAATCCCTCCAGCAAG CGTATCCAAATTCCCAAGAAAAAGCAGTTATTCGCAGTACAGTTGCGACAGATAAACCGGGTGTTGAAGGTACTGTTTTA GGTTTCTTGGTAGTTGATACAGAAGGCAAAGTTTTAGATATCAAGTTTCAAGACAAAACTGTTTCTCCCGACTTGCAATT AAAAGCAAGGGAATATTTTACAAAAAATGCTCCTAAGGGAGACAGACAAATTAGTCGTTATCCTTTTAGCTTGAGTATCC AAAACAACAGCAATAATACTGCGGTGACTGAAGATAAAAATCCTGGTGTGGTTATTCCCAAACCAGCTTCGACTCCGTTA GTCAATCGTACTCAACCAACAACAGCACCAATCACCACTCCTAAGCCTTTACCACAACTCCAACTGAGAGAAGCTAATCC TCAACCTTCAGCACAAGTACAAATCAAAAAAGACCAACCTACTCAGACACCAACTGTTCAGGCTTCACCTGAGATGACAT CTGGCAAAAATCAGCTATCTTCAACGGTGGAATCTAGTCAAACACTTCTAGAAAAGCTGCGTGAGGCTAGAAAACAGCAA CAGCAAAGACAAGAGCCTAATTCTTCAGACAGATAA
Upstream 100 bases:
>100_bases ACATGGACAGTTATCATTTTTAAAAGGGCGCATTTATTGCATTCAAGATAATATTTTTCTGCTAGTCAACCGCAACCGAG CCGAGTGAACGATAACAGTT
Downstream 100 bases:
>100_bases GGCTGGGGAATGGTAAGCGGGGAGTGATGAGTAATTATTACTATCTCAACTCCCACTAACTGACATCACGCACCAGACTG TTAAAATCGCGGCTATAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSYVSLLKNIPDILGQPTGIAAIASLGIHGAIALIVPLMPVDSNKSNESSPKSVGVLELSQADQSRLPQSADPNQVGLQA QLPLQSQFPQQPQLGNITSFNNQTAVLPPLPPPITPPISLPPVYTTPDNYRIASLPRSQPLRQSPRRDLRFDNSGFSAIG EKFTPTTPPSFNEREVIPETSRSLPVDRLPELNAAKLPDDLPPNPPSNTNPPVADSGSNAATVAPIEPQVAPIVQAPKAG DNLAFANESIPQWQQGSTLKTPELPWQNPQQRSEQGLIAQVNSYEDLRKSLQQAYPNSQEKAVIRSTVATDKPGVEGTVL GFLVVDTEGKVLDIKFQDKTVSPDLQLKAREYFTKNAPKGDRQISRYPFSLSIQNNSNNTAVTEDKNPGVVIPKPASTPL VNRTQPTTAPITTPKPLPQLQLREANPQPSAQVQIKKDQPTQTPTVQASPEMTSGKNQLSSTVESSQTLLEKLREARKQQ QQRQEPNSSDR
Sequences:
>Translated_491_residues MSYVSLLKNIPDILGQPTGIAAIASLGIHGAIALIVPLMPVDSNKSNESSPKSVGVLELSQADQSRLPQSADPNQVGLQA QLPLQSQFPQQPQLGNITSFNNQTAVLPPLPPPITPPISLPPVYTTPDNYRIASLPRSQPLRQSPRRDLRFDNSGFSAIG EKFTPTTPPSFNEREVIPETSRSLPVDRLPELNAAKLPDDLPPNPPSNTNPPVADSGSNAATVAPIEPQVAPIVQAPKAG DNLAFANESIPQWQQGSTLKTPELPWQNPQQRSEQGLIAQVNSYEDLRKSLQQAYPNSQEKAVIRSTVATDKPGVEGTVL GFLVVDTEGKVLDIKFQDKTVSPDLQLKAREYFTKNAPKGDRQISRYPFSLSIQNNSNNTAVTEDKNPGVVIPKPASTPL VNRTQPTTAPITTPKPLPQLQLREANPQPSAQVQIKKDQPTQTPTVQASPEMTSGKNQLSSTVESSQTLLEKLREARKQQ QQRQEPNSSDR >Mature_490_residues SYVSLLKNIPDILGQPTGIAAIASLGIHGAIALIVPLMPVDSNKSNESSPKSVGVLELSQADQSRLPQSADPNQVGLQAQ LPLQSQFPQQPQLGNITSFNNQTAVLPPLPPPITPPISLPPVYTTPDNYRIASLPRSQPLRQSPRRDLRFDNSGFSAIGE KFTPTTPPSFNEREVIPETSRSLPVDRLPELNAAKLPDDLPPNPPSNTNPPVADSGSNAATVAPIEPQVAPIVQAPKAGD NLAFANESIPQWQQGSTLKTPELPWQNPQQRSEQGLIAQVNSYEDLRKSLQQAYPNSQEKAVIRSTVATDKPGVEGTVLG FLVVDTEGKVLDIKFQDKTVSPDLQLKAREYFTKNAPKGDRQISRYPFSLSIQNNSNNTAVTEDKNPGVVIPKPASTPLV NRTQPTTAPITTPKPLPQLQLREANPQPSAQVQIKKDQPTQTPTVQASPEMTSGKNQLSSTVESSQTLLEKLREARKQQQ QRQEPNSSDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53313; Mature: 53182
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVSLLKNIPDILGQPTGIAAIASLGIHGAIALIVPLMPVDSNKSNESSPKSVGVLELS CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEC QADQSRLPQSADPNQVGLQAQLPLQSQFPQQPQLGNITSFNNQTAVLPPLPPPITPPISL CCHHHHCCCCCCCCCCCCEEECCHHHCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCC PPVYTTPDNYRIASLPRSQPLRQSPRRDLRFDNSGFSAIGEKFTPTTPPSFNEREVIPET CCEEECCCCCEEECCCCCCCHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC SRSLPVDRLPELNAAKLPDDLPPNPPSNTNPPVADSGSNAATVAPIEPQVAPIVQAPKAG CCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCCCCC DNLAFANESIPQWQQGSTLKTPELPWQNPQQRSEQGLIAQVNSYEDLRKSLQQAYPNSQE CCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCHHHHHHHHHHHCCCCHH KAVIRSTVATDKPGVEGTVLGFLVVDTEGKVLDIKFQDKTVSPDLQLKAREYFTKNAPKG HHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEHHHHHHHCCCCCC DRQISRYPFSLSIQNNSNNTAVTEDKNPGVVIPKPASTPLVNRTQPTTAPITTPKPLPQL CCHHHHCCEEEEEECCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH QLREANPQPSAQVQIKKDQPTQTPTVQASPEMTSGKNQLSSTVESSQTLLEKLREARKQQ HEECCCCCCCCEEEEECCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQRQEPNSSDR HHHHCCCCCCC >Mature Secondary Structure SYVSLLKNIPDILGQPTGIAAIASLGIHGAIALIVPLMPVDSNKSNESSPKSVGVLELS CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEC QADQSRLPQSADPNQVGLQAQLPLQSQFPQQPQLGNITSFNNQTAVLPPLPPPITPPISL CCHHHHCCCCCCCCCCCCEEECCHHHCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCC PPVYTTPDNYRIASLPRSQPLRQSPRRDLRFDNSGFSAIGEKFTPTTPPSFNEREVIPET CCEEECCCCCEEECCCCCCCHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC SRSLPVDRLPELNAAKLPDDLPPNPPSNTNPPVADSGSNAATVAPIEPQVAPIVQAPKAG CCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCCCCC DNLAFANESIPQWQQGSTLKTPELPWQNPQQRSEQGLIAQVNSYEDLRKSLQQAYPNSQE CCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCHHHHHHHHHHHCCCCHH KAVIRSTVATDKPGVEGTVLGFLVVDTEGKVLDIKFQDKTVSPDLQLKAREYFTKNAPKG HHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEHHHHHHHCCCCCC DRQISRYPFSLSIQNNSNNTAVTEDKNPGVVIPKPASTPLVNRTQPTTAPITTPKPLPQL CCHHHHCCEEEEEECCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH QLREANPQPSAQVQIKKDQPTQTPTVQASPEMTSGKNQLSSTVESSQTLLEKLREARKQQ HEECCCCCCCCEEEEECCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQRQEPNSSDR HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA