| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is hetM [H]
Identifier: 75908809
GI number: 75908809
Start: 3216212
End: 3217732
Strand: Direct
Name: hetM [H]
Synonym: Ava_2595
Alternate gene names: 75908809
Gene position: 3216212-3217732 (Clockwise)
Preceding gene: 75908808
Following gene: 75908810
Centisome position: 50.52
GC content: 43.13
Gene sequence:
>1521_bases ATGAGTCTAAAACAAAATTATAGTGCAGCAGATATTCAAGCTTGGATGATAGCTAATCTAGCTGAATTGTTGGGGGTGGA TGGTGATGAAATCGATGCTACTGTCAATTTAGAAAGCTATGGTTTAGATTCGGCACAGGCAATGGTTCTAGTTAGTAAAC TAGAGCAATTGTTGGGATTTCAACCTTCACCTTTATTGTTGTGGCATTACCCTACTATTGAGTCATTGTCTGAACGTTTA GCTGAAGAGTTGGCAGAACAATCAGAGGAACAAGATACAGATTCTGCTACTGCTAGCCACAGCAATGGTACACCAGTCCT CGACTTACAAGCTGAGGTGGTTCTTGACCCCACAATTCATCCTGGTGGTGCTATCCCGGTTGATTTTCCGGTAACTCAAC CTAAGAAAGTATTTCTGACTGGGGGGACTGGGTTTTTAGGCGCTTTCTTAATTCGGGAACTGCTACAGCAAACTCAGGCT GATGTATATTGTTTGGTACGCGCTGCTGATGCCCAAGCTGGTAAAGCAAAAATCCAAACTAATCTGGAAGGTTACGCGAT TTGGCAGGAAGAATATGCGTCGAGAATTATTCCTGTTGTTGGTGATTTAGCGGAACCACTTTTGGGTTTAAGTTCCACAC AGTTCCAGACTTTGGCGGCGGAAATTGACACTATTTATCATAGTGGCGCATTGTTGAATTATGTTTTCCCTTACTCAGCT TTGAAGGCGGCGAATGTATTGGGAACTCAAGAGGTTTTACGATTGGCTTGCCAAATTAAAGTTAAGCCGGTGCATTATGT TTCTAGTGTGGCGGTGTTTGAATCACCTGTCTATGCTGGTAAGGTAGTCAAGGAAAGTGATGATTTTAGCCATTGGGAAG GGATTTTCCTTGGTTATTCCCAAACCAAATGGGTGGCAGAAAAGTTGGTGAAGATTGCGAGCGATCGCGGTTTACCTGTT ACTATCCATAGACCACCCTTAATTGGTGGAGATAGTGCCACTGGTATCGGTAACACCCACGACTTTATCAATTTGATGGT TAAGGGTTGTTTGCAAATGAAATGCTTTCCCGATGTAGAGTATATGCTAGATATGTCTCCTGTAGATTATGTCAGCAAAG CGATTGTGCATCTATCGATGCAAAAGGAATCGCTAGGTAAAGCTTTCCACCTACAACACCCAGAACCAGTATCTTTAAGT GTCTTAGTTGACTGGGTACGTTCATTTGGCTACGAGATTAAAACCCTTCCCTACGAAGAATGGCAAGCAGAGTTAATTGC AAATGCCACTTCTGTAGATAATCCCTTATACACCTTGCGTCCTTTCCTCCTAGAACGCTGGTCTGATGAACAACTCACTA TCCCTGATTTGTACCTCAAAGCCAGAAGACCCCACATTAGCTGTCAAGACACCCTCAAAGCCCTAGCTGGTACTTCTATT GGTTGCCCACCGATTGATGGCAAATTATTCATGACTTACACAGCTTACTTGATTCAAACTGGGTTCTTGACCTTGGCTTG A
Upstream 100 bases:
>100_bases GAAAGATTCATGGTAAACCACCAATTACCAATGACCAATTACCAATTACCAAGATTATAAATCGACAACTTGACTTACTA AATAATTCGGAGATTTCATA
Downstream 100 bases:
>100_bases GGAGAAGACGCGATGCCAGTCGCTACAACGGGGGGAACCCCAACGGACAGTTCGCTCAAGTCGGGAAACCCGCCCACGCA ACTGTCCTCCGCAACGCGCT
Product: thioester reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MSLKQNYSAADIQAWMIANLAELLGVDGDEIDATVNLESYGLDSAQAMVLVSKLEQLLGFQPSPLLLWHYPTIESLSERL AEELAEQSEEQDTDSATASHSNGTPVLDLQAEVVLDPTIHPGGAIPVDFPVTQPKKVFLTGGTGFLGAFLIRELLQQTQA DVYCLVRAADAQAGKAKIQTNLEGYAIWQEEYASRIIPVVGDLAEPLLGLSSTQFQTLAAEIDTIYHSGALLNYVFPYSA LKAANVLGTQEVLRLACQIKVKPVHYVSSVAVFESPVYAGKVVKESDDFSHWEGIFLGYSQTKWVAEKLVKIASDRGLPV TIHRPPLIGGDSATGIGNTHDFINLMVKGCLQMKCFPDVEYMLDMSPVDYVSKAIVHLSMQKESLGKAFHLQHPEPVSLS VLVDWVRSFGYEIKTLPYEEWQAELIANATSVDNPLYTLRPFLLERWSDEQLTIPDLYLKARRPHISCQDTLKALAGTSI GCPPIDGKLFMTYTAYLIQTGFLTLA
Sequences:
>Translated_506_residues MSLKQNYSAADIQAWMIANLAELLGVDGDEIDATVNLESYGLDSAQAMVLVSKLEQLLGFQPSPLLLWHYPTIESLSERL AEELAEQSEEQDTDSATASHSNGTPVLDLQAEVVLDPTIHPGGAIPVDFPVTQPKKVFLTGGTGFLGAFLIRELLQQTQA DVYCLVRAADAQAGKAKIQTNLEGYAIWQEEYASRIIPVVGDLAEPLLGLSSTQFQTLAAEIDTIYHSGALLNYVFPYSA LKAANVLGTQEVLRLACQIKVKPVHYVSSVAVFESPVYAGKVVKESDDFSHWEGIFLGYSQTKWVAEKLVKIASDRGLPV TIHRPPLIGGDSATGIGNTHDFINLMVKGCLQMKCFPDVEYMLDMSPVDYVSKAIVHLSMQKESLGKAFHLQHPEPVSLS VLVDWVRSFGYEIKTLPYEEWQAELIANATSVDNPLYTLRPFLLERWSDEQLTIPDLYLKARRPHISCQDTLKALAGTSI GCPPIDGKLFMTYTAYLIQTGFLTLA >Mature_505_residues SLKQNYSAADIQAWMIANLAELLGVDGDEIDATVNLESYGLDSAQAMVLVSKLEQLLGFQPSPLLLWHYPTIESLSERLA EELAEQSEEQDTDSATASHSNGTPVLDLQAEVVLDPTIHPGGAIPVDFPVTQPKKVFLTGGTGFLGAFLIRELLQQTQAD VYCLVRAADAQAGKAKIQTNLEGYAIWQEEYASRIIPVVGDLAEPLLGLSSTQFQTLAAEIDTIYHSGALLNYVFPYSAL KAANVLGTQEVLRLACQIKVKPVHYVSSVAVFESPVYAGKVVKESDDFSHWEGIFLGYSQTKWVAEKLVKIASDRGLPVT IHRPPLIGGDSATGIGNTHDFINLMVKGCLQMKCFPDVEYMLDMSPVDYVSKAIVHLSMQKESLGKAFHLQHPEPVSLSV LVDWVRSFGYEIKTLPYEEWQAELIANATSVDNPLYTLRPFLLERWSDEQLTIPDLYLKARRPHISCQDTLKALAGTSIG CPPIDGKLFMTYTAYLIQTGFLTLA
Specific function: Unknown
COG id: COG3320
COG function: function code Q; Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319591, Length=466, Percent_Identity=30.4721030042918, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI221330327, Length=275, Percent_Identity=29.4545454545455, Blast_Score=99, Evalue=9e-21, Organism=Drosophila melanogaster, GI28572029, Length=224, Percent_Identity=29.0178571428571, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI19920962, Length=253, Percent_Identity=26.4822134387352, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI78706760, Length=164, Percent_Identity=32.9268292682927, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI20129837, Length=225, Percent_Identity=26.2222222222222, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24652250, Length=225, Percent_Identity=26.2222222222222, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24647492, Length=226, Percent_Identity=26.5486725663717, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI28572084, Length=292, Percent_Identity=26.7123287671233, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24649464, Length=292, Percent_Identity=26.7123287671233, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24647494, Length=131, Percent_Identity=32.824427480916, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009081 - InterPro: IPR013120 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR010080 [H]
Pfam domain/function: PF07993 NAD_binding_4; PF00550 PP-binding [H]
EC number: NA
Molecular weight: Translated: 55669; Mature: 55538
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS50075 ACP_DOMAIN ; PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKQNYSAADIQAWMIANLAELLGVDGDEIDATVNLESYGLDSAQAMVLVSKLEQLLGF CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHCC QPSPLLLWHYPTIESLSERLAEELAEQSEEQDTDSATASHSNGTPVLDLQAEVVLDPTIH CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCC PGGAIPVDFPVTQPKKVFLTGGTGFLGAFLIRELLQQTQADVYCLVRAADAQAGKAKIQT CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEE NLEGYAIWQEEYASRIIPVVGDLAEPLLGLSSTQFQTLAAEIDTIYHSGALLNYVFPYSA CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHH LKAANVLGTQEVLRLACQIKVKPVHYVSSVAVFESPVYAGKVVKESDDFSHWEGIFLGYS HHHHHHCCHHHHHHHHHHEEECCHHHHHHHHHHCCCCHHCCEECCCCCCCCCCEEEECCC QTKWVAEKLVKIASDRGLPVTIHRPPLIGGDSATGIGNTHDFINLMVKGCLQMKCFPDVE HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH YMLDMSPVDYVSKAIVHLSMQKESLGKAFHLQHPEPVSLSVLVDWVRSFGYEIKTLPYEE HHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCEEEECCHHH WQAELIANATSVDNPLYTLRPFLLERWSDEQLTIPDLYLKARRPHISCQDTLKALAGTSI HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEECCHHHHHCCCCCCCHHHHHHHHHCCCC GCPPIDGKLFMTYTAYLIQTGFLTLA CCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLKQNYSAADIQAWMIANLAELLGVDGDEIDATVNLESYGLDSAQAMVLVSKLEQLLGF CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHCC QPSPLLLWHYPTIESLSERLAEELAEQSEEQDTDSATASHSNGTPVLDLQAEVVLDPTIH CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCC PGGAIPVDFPVTQPKKVFLTGGTGFLGAFLIRELLQQTQADVYCLVRAADAQAGKAKIQT CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEE NLEGYAIWQEEYASRIIPVVGDLAEPLLGLSSTQFQTLAAEIDTIYHSGALLNYVFPYSA CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHH LKAANVLGTQEVLRLACQIKVKPVHYVSSVAVFESPVYAGKVVKESDDFSHWEGIFLGYS HHHHHHCCHHHHHHHHHHEEECCHHHHHHHHHHCCCCHHCCEECCCCCCCCCCEEEECCC QTKWVAEKLVKIASDRGLPVTIHRPPLIGGDSATGIGNTHDFINLMVKGCLQMKCFPDVE HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH YMLDMSPVDYVSKAIVHLSMQKESLGKAFHLQHPEPVSLSVLVDWVRSFGYEIKTLPYEE HHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCEEEECCHHH WQAELIANATSVDNPLYTLRPFLLERWSDEQLTIPDLYLKARRPHISCQDTLKALAGTSI HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEECCHHHHHCCCCCCCHHHHHHHHHCCCC GCPPIDGKLFMTYTAYLIQTGFLTLA CCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8157596; 11759840 [H]