| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908685
Identifier: 75908685
GI number: 75908685
Start: 3065930
End: 3066556
Strand: Direct
Name: 75908685
Synonym: Ava_2471
Alternate gene names: NA
Gene position: 3065930-3066556 (Clockwise)
Preceding gene: 75908676
Following gene: 75908686
Centisome position: 48.16
GC content: 43.7
Gene sequence:
>627_bases ATGAATGCTTCCGCTAGCTTAACGCCGTTTAACAGTCCAACGCCTCCATCCCTGCCGATGATATTGGAGACTTTACCAGA TCCTGCGATCGCTGGACATGGATGTCCTGCACGCACCAGGTTGCAAATTGATTTAATTTTACTGGCAATTGAAGCTTTAG AACTGGGTGGTTCTGAAGCTATCCTGACGTTTGCGGCAGAATTGGACTTGAAGGGAATTGTCAAAGATCGGGTGAATTTG TGGCGAATGCGGAGTTCCAACCCGATTAGACGAGCGCATATTCGCCGCCCTTTAACCATCATGGAAGCAAAAGCTTTAGT CGTGATTGCTTGTTACATAGCTCGGCGCTTAACAGTGGTCATCCGCCAGATGTTGATGATTTGTCAACAAATGAATGACA AGCAAATTCCCCTGGAACAGAACTTACGCCTATCTAATTATTTAGAAAGATTTAGAGCGCATTTTAAGAGTAGAATGAAT GCCCGCCGTTTTGGTGCATTAGCATTGAATTCTGATGAAAAATTAGATGAACTAGCGATAAATTTGTTAGGGCAATTGTT ATTTTGTACTGGCACTGCTGGGATGCAGCGATTTTGGATCAGTCTATTTGACGGTGAAGTGGAATGA
Upstream 100 bases:
>100_bases GCTGATGCCGCAAGTTTAATCTTGTAGTTTAGCTGTTTATCTTAAATTAGTTGTACTAGTTTTATCTAGTCTATTAGAAC TGCACAAGGTATTTGAGAGA
Downstream 100 bases:
>100_bases ATATTCAACGAAAGTACAGTCTACCTAATTGTACGTTGCTTTTAGAAGGATTAAGTGATGCCAGTAGAGGTGCAAATTTT CAGGAATTGCGCCCTGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNASASLTPFNSPTPPSLPMILETLPDPAIAGHGCPARTRLQIDLILLAIEALELGGSEAILTFAAELDLKGIVKDRVNL WRMRSSNPIRRAHIRRPLTIMEAKALVVIACYIARRLTVVIRQMLMICQQMNDKQIPLEQNLRLSNYLERFRAHFKSRMN ARRFGALALNSDEKLDELAINLLGQLLFCTGTAGMQRFWISLFDGEVE
Sequences:
>Translated_208_residues MNASASLTPFNSPTPPSLPMILETLPDPAIAGHGCPARTRLQIDLILLAIEALELGGSEAILTFAAELDLKGIVKDRVNL WRMRSSNPIRRAHIRRPLTIMEAKALVVIACYIARRLTVVIRQMLMICQQMNDKQIPLEQNLRLSNYLERFRAHFKSRMN ARRFGALALNSDEKLDELAINLLGQLLFCTGTAGMQRFWISLFDGEVE >Mature_208_residues MNASASLTPFNSPTPPSLPMILETLPDPAIAGHGCPARTRLQIDLILLAIEALELGGSEAILTFAAELDLKGIVKDRVNL WRMRSSNPIRRAHIRRPLTIMEAKALVVIACYIARRLTVVIRQMLMICQQMNDKQIPLEQNLRLSNYLERFRAHFKSRMN ARRFGALALNSDEKLDELAINLLGQLLFCTGTAGMQRFWISLFDGEVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23397; Mature: 23397
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASASLTPFNSPTPPSLPMILETLPDPAIAGHGCPARTRLQIDLILLAIEALELGGSEA CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCE ILTFAAELDLKGIVKDRVNLWRMRSSNPIRRAHIRRPLTIMEAKALVVIACYIARRLTVV EEHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH IRQMLMICQQMNDKQIPLEQNLRLSNYLERFRAHFKSRMNARRFGALALNSDEKLDELAI HHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCHHHHCEEEECCCHHHHHHHH NLLGQLLFCTGTAGMQRFWISLFDGEVE HHHHHHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MNASASLTPFNSPTPPSLPMILETLPDPAIAGHGCPARTRLQIDLILLAIEALELGGSEA CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCE ILTFAAELDLKGIVKDRVNLWRMRSSNPIRRAHIRRPLTIMEAKALVVIACYIARRLTVV EEHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH IRQMLMICQQMNDKQIPLEQNLRLSNYLERFRAHFKSRMNARRFGALALNSDEKLDELAI HHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCHHHHCEEEECCCHHHHHHHH NLLGQLLFCTGTAGMQRFWISLFDGEVE HHHHHHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA