| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908666
Identifier: 75908666
GI number: 75908666
Start: 3043364
End: 3044272
Strand: Direct
Name: 75908666
Synonym: Ava_2452
Alternate gene names: NA
Gene position: 3043364-3044272 (Clockwise)
Preceding gene: 75908665
Following gene: 75908669
Centisome position: 47.81
GC content: 36.63
Gene sequence:
>909_bases ATGACGCAATCATCACCAAATTATCAACAATTTATAGAAGAACAAGAGCCTCAAACTTCTCCCGAAGCGCTATCAAAACA TTCACCAGAAGTAGAATCTTTGATTGAGCGTCTAAGAAAAAGCGATACCTATTACCTTTTCATTCGAGACCGACAACTTT TCAATTGGTTAGATTTCCAACGTGAGTCTAGAGCTAATGGTTATGTTGTTGCAGTTAGTTGTGCAGATTTAAGAAAAGCT TGTCAATTTTATCGCTTGAGATATGTACGCAAACGTGGAACCTTACACACAATTCCTATGCCTGTTGTTTATGCACAAGT TCAGCAACCGGGTACGCCAACAGATTTATTTCTAGCAATTTTGTCAGAACTGAGTAATCCTTTTACGGGCGTATGTCAAT TAAAACTCTTAAGAAATCGTACTTGGATGACACTTAGTTACTACAACGTTAGTGTGCTAATCATTGGGAATGCACATTAC CTCACCTATCAATCTTTTAACGAGCTTGTTGAAATTACTCGCCATTTAAAAATTTCCGTAGTTCCTGTTGGTTCGCTTTA TCTACATGAAATTCTCACTCGTCAAAGTAAGAAATATACAGATGTAGCCAATACATTCTTAGATTGGCATGAATTTAGCT CATTTCAAAAACAAGAAACAGCAGAAGTCATATCAAGTTGGGAGTCTCAAGTTCTAGATGGCTGGAAGCAACCATTAAAT CTTACAAGTGATAGTGGCATTGTAAACATTCTTTATGAAAGGTCAGGGGGACAGGCTGAAACTTTATATGAAATGCTACG AAAAATTGCAATTTTCTCCCTAGAAAAGCCTGACTTAGCTCTAAATATTTCATCTTTAAAGTCCATTCTGTTCACTCGTA GTAAACCTGTTAACAGAATATCCACTTAG
Upstream 100 bases:
>100_bases CAATAAATTTGGTCAGTGAGCCTAAACAACAATGCGCTAAATCGAGTCAAAGCATTGCTTATGACTGGAACCAAATTATT GAAGAGAATTGGTAGCTTTT
Downstream 100 bases:
>100_bases CTACTAAACTCAAACAGATAACCATTGTTAATGGAGTATCCTAGTTGAAAAGTCCCATTCGTCTCTAGCACAAGTTTGAG TTCCCCCACTTTCATAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase Transposase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTQSSPNYQQFIEEQEPQTSPEALSKHSPEVESLIERLRKSDTYYLFIRDRQLFNWLDFQRESRANGYVVAVSCADLRKA CQFYRLRYVRKRGTLHTIPMPVVYAQVQQPGTPTDLFLAILSELSNPFTGVCQLKLLRNRTWMTLSYYNVSVLIIGNAHY LTYQSFNELVEITRHLKISVVPVGSLYLHEILTRQSKKYTDVANTFLDWHEFSSFQKQETAEVISSWESQVLDGWKQPLN LTSDSGIVNILYERSGGQAETLYEMLRKIAIFSLEKPDLALNISSLKSILFTRSKPVNRIST
Sequences:
>Translated_302_residues MTQSSPNYQQFIEEQEPQTSPEALSKHSPEVESLIERLRKSDTYYLFIRDRQLFNWLDFQRESRANGYVVAVSCADLRKA CQFYRLRYVRKRGTLHTIPMPVVYAQVQQPGTPTDLFLAILSELSNPFTGVCQLKLLRNRTWMTLSYYNVSVLIIGNAHY LTYQSFNELVEITRHLKISVVPVGSLYLHEILTRQSKKYTDVANTFLDWHEFSSFQKQETAEVISSWESQVLDGWKQPLN LTSDSGIVNILYERSGGQAETLYEMLRKIAIFSLEKPDLALNISSLKSILFTRSKPVNRIST >Mature_301_residues TQSSPNYQQFIEEQEPQTSPEALSKHSPEVESLIERLRKSDTYYLFIRDRQLFNWLDFQRESRANGYVVAVSCADLRKAC QFYRLRYVRKRGTLHTIPMPVVYAQVQQPGTPTDLFLAILSELSNPFTGVCQLKLLRNRTWMTLSYYNVSVLIIGNAHYL TYQSFNELVEITRHLKISVVPVGSLYLHEILTRQSKKYTDVANTFLDWHEFSSFQKQETAEVISSWESQVLDGWKQPLNL TSDSGIVNILYERSGGQAETLYEMLRKIAIFSLEKPDLALNISSLKSILFTRSKPVNRIST
Specific function: Unknown
COG id: COG2842
COG function: function code R; Uncharacterized ATPase, putative transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34952; Mature: 34821
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSSPNYQQFIEEQEPQTSPEALSKHSPEVESLIERLRKSDTYYLFIRDRQLFNWLDFQ CCCCCCCHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH RESRANGYVVAVSCADLRKACQFYRLRYVRKRGTLHTIPMPVVYAQVQQPGTPTDLFLAI HHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCHHHHHHH LSELSNPFTGVCQLKLLRNRTWMTLSYYNVSVLIIGNAHYLTYQSFNELVEITRHLKISV HHHHCCCCHHHHHHHHHHCCEEEEEEEEEEEEEEEECCEEEEHHHHHHHHHHHHHCEEEE VPVGSLYLHEILTRQSKKYTDVANTFLDWHEFSSFQKQETAEVISSWESQVLDGWKQPLN EECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LTSDSGIVNILYERSGGQAETLYEMLRKIAIFSLEKPDLALNISSLKSILFTRSKPVNRI CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCC ST CC >Mature Secondary Structure TQSSPNYQQFIEEQEPQTSPEALSKHSPEVESLIERLRKSDTYYLFIRDRQLFNWLDFQ CCCCCCHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH RESRANGYVVAVSCADLRKACQFYRLRYVRKRGTLHTIPMPVVYAQVQQPGTPTDLFLAI HHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCHHHHHHH LSELSNPFTGVCQLKLLRNRTWMTLSYYNVSVLIIGNAHYLTYQSFNELVEITRHLKISV HHHHCCCCHHHHHHHHHHCCEEEEEEEEEEEEEEEECCEEEEHHHHHHHHHHHHHCEEEE VPVGSLYLHEILTRQSKKYTDVANTFLDWHEFSSFQKQETAEVISSWESQVLDGWKQPLN EECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LTSDSGIVNILYERSGGQAETLYEMLRKIAIFSLEKPDLALNISSLKSILFTRSKPVNRI CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCC ST CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA