| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908618
Identifier: 75908618
GI number: 75908618
Start: 2985628
End: 2987487
Strand: Direct
Name: 75908618
Synonym: Ava_2402
Alternate gene names: NA
Gene position: 2985628-2987487 (Clockwise)
Preceding gene: 75908617
Following gene: 75908619
Centisome position: 46.9
GC content: 37.58
Gene sequence:
>1860_bases ATGATGCAACCTGGACTTTGGAGCGGAATTAAAGCAGAAATTGCCATTTGGCGCGTAGGTATATTACCAGGATTAGCAGT CATTGGACTAGTCACCTTTACAAGACTTTTTGGTTCGCTAGAGTCCTTAGAATGGATGGCTTTGGATAGTTTTCTCCGTT GGCGCTCAGAAGAACCTATAGATGCACGAATTCTGTTAGTAGAAATTAATCAAGGTGATAATTATTCTCTAACATCAACT ATATCAGATAGTGGTTTTGTAGGGCTGCTGGAGAAGTTACAAGTTTATCAGCCTAAAGTTATCGGTCTAAATATTGATCG GAATTTACTCATCAATTCTCCAGAGGATGACCTGGTCAAGCTTTTTCAAAAGTACAGAAATTTAATTGCTACTGAAAACA TTTTACCTGCCCAGATTCATTCGCATCTAGATTTGCCTCCTGAACAGATTGCTTTTGCAGACCAAATTCTAGATAGTGAC GGTAAGGCGAGACGTAGTCTATTGGCAATTAATACATCTAATGGCTATAAATTATCTTTTGCTATGCGATTAGCAAGAAT TTATTTAGCCCAGGAAAATATTAGTTTAGAAAGTAGTCAGTTGGGAAAAACGAAACTACCCCGCTTTTTACCAAACTCTG GAGGATATATCCGTGCTGATGCCAGTGGATTTCAAGTACTAATAAATTTCCGTAGTGGCACCAGAAGATTTAGAACTTTA TCTGGGGAGGACATTAAAAATGGTAAATTTAACCCTGAATGGATACGCGATCGCATAGTCATTATCGGTATTACAAATAC TCATAGTCAGGACTTTATCCCAACTTCAGCGATTACATCAATTAAATCAGCCCCCAAGCAAGTTAACACATTGGAAATCC AAGCACACGCCATCAGTCAAATTATTAGTGCTGTGCTTGATGGTAGACCACTAATTAATACTTGGAATGATGGATGGGAA TATACTTGGATTTTTGTTTGGGGTTTTTTAGGAATAGTGATTGCTAGGTTCACTAAATCCCCACTAGTAAATTTTTTGGT TGTGGGAATAACTATCACTAGTCTACTAGTAATTAGTTACCTACTATTAATTTGGGGGTGGTGGGTTCCAGTCATACCTG CAATTTTAGTCTTGACCATAAATGGTATGGAACTGATAGCATTATATCAATACGACCAAGCTTTACGCTTAGGGATGAAA ACGCGTCAAGACGTAATAGAAAGTACCTTTGAAACCATCCATAATGGACCACTACAAAGTTTAGCCCAAGTTTTAAAATT GATACGCTGCGAAAATACCAATACTCAGGAATTGCTCCCAAAGATTGAAAAAGAACTAGAGAAATTAAATCATGAGCTAC GAGGAATTTACGAATTCTTGCAGCAAGAATATCCCAGTCAAGATATCAAACTGTATTTAGGTAATAATTTAGTCCTTAGT TTGCAAGATCCACTACACGAAGTCCTCTATCAAGTTTACAGTTATACTTTAGATAGAGAGTTTCCTTGCTTTAAAACAAT TAAAGTTGCCATACGTAGCTTTGAACCAATAGATGAAAAAAGTTTAAGTATGGAACAAAAACGAGGAATTTGTAGATTTT TAGAAGAAGCTTTATGTAATGTAGGTAAACACGCTACCGGAGTCACTAAACTCCAAGTCACTTGCTCATTAATAGCAGGT TGGTACACGTTGAAAATTATAGATAATGGCTTAGGCGTAAATTCATCCAAAAAAGGACGAGGAACCCAACAGTTTATCAA TTTAGCACGACAACTACGGGGAAAATTCCAGCGATCGCCCCAAATCCCCCAAGGAACCATCTGCGAATTATCTTGGCCAG TCAGTCAGTTTTGGAGATAG
Upstream 100 bases:
>100_bases GAACATTACACGACTATGAGTAATTAATAGTGGTTAGTTTATCTATCCCTAATTAATTAAACCTGACCAATTACTCATAC CTAAAGACTAGGAGAATAGC
Downstream 100 bases:
>100_bases TAATCCCCAAATTCCCAGCAATTTGCCCAGCAACCATGCCACTATAGAAGACATAGCTTTAAACATAGCAAGAAAAAGGC TAGAAAACGCTGTGCAGATT
Product: sensor protein
Products: 3',5'-cyclic AMP; diphosphate
Alternate protein names: None
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MMQPGLWSGIKAEIAIWRVGILPGLAVIGLVTFTRLFGSLESLEWMALDSFLRWRSEEPIDARILLVEINQGDNYSLTST ISDSGFVGLLEKLQVYQPKVIGLNIDRNLLINSPEDDLVKLFQKYRNLIATENILPAQIHSHLDLPPEQIAFADQILDSD GKARRSLLAINTSNGYKLSFAMRLARIYLAQENISLESSQLGKTKLPRFLPNSGGYIRADASGFQVLINFRSGTRRFRTL SGEDIKNGKFNPEWIRDRIVIIGITNTHSQDFIPTSAITSIKSAPKQVNTLEIQAHAISQIISAVLDGRPLINTWNDGWE YTWIFVWGFLGIVIARFTKSPLVNFLVVGITITSLLVISYLLLIWGWWVPVIPAILVLTINGMELIALYQYDQALRLGMK TRQDVIESTFETIHNGPLQSLAQVLKLIRCENTNTQELLPKIEKELEKLNHELRGIYEFLQQEYPSQDIKLYLGNNLVLS LQDPLHEVLYQVYSYTLDREFPCFKTIKVAIRSFEPIDEKSLSMEQKRGICRFLEEALCNVGKHATGVTKLQVTCSLIAG WYTLKIIDNGLGVNSSKKGRGTQQFINLARQLRGKFQRSPQIPQGTICELSWPVSQFWR
Sequences:
>Translated_619_residues MMQPGLWSGIKAEIAIWRVGILPGLAVIGLVTFTRLFGSLESLEWMALDSFLRWRSEEPIDARILLVEINQGDNYSLTST ISDSGFVGLLEKLQVYQPKVIGLNIDRNLLINSPEDDLVKLFQKYRNLIATENILPAQIHSHLDLPPEQIAFADQILDSD GKARRSLLAINTSNGYKLSFAMRLARIYLAQENISLESSQLGKTKLPRFLPNSGGYIRADASGFQVLINFRSGTRRFRTL SGEDIKNGKFNPEWIRDRIVIIGITNTHSQDFIPTSAITSIKSAPKQVNTLEIQAHAISQIISAVLDGRPLINTWNDGWE YTWIFVWGFLGIVIARFTKSPLVNFLVVGITITSLLVISYLLLIWGWWVPVIPAILVLTINGMELIALYQYDQALRLGMK TRQDVIESTFETIHNGPLQSLAQVLKLIRCENTNTQELLPKIEKELEKLNHELRGIYEFLQQEYPSQDIKLYLGNNLVLS LQDPLHEVLYQVYSYTLDREFPCFKTIKVAIRSFEPIDEKSLSMEQKRGICRFLEEALCNVGKHATGVTKLQVTCSLIAG WYTLKIIDNGLGVNSSKKGRGTQQFINLARQLRGKFQRSPQIPQGTICELSWPVSQFWR >Mature_619_residues MMQPGLWSGIKAEIAIWRVGILPGLAVIGLVTFTRLFGSLESLEWMALDSFLRWRSEEPIDARILLVEINQGDNYSLTST ISDSGFVGLLEKLQVYQPKVIGLNIDRNLLINSPEDDLVKLFQKYRNLIATENILPAQIHSHLDLPPEQIAFADQILDSD GKARRSLLAINTSNGYKLSFAMRLARIYLAQENISLESSQLGKTKLPRFLPNSGGYIRADASGFQVLINFRSGTRRFRTL SGEDIKNGKFNPEWIRDRIVIIGITNTHSQDFIPTSAITSIKSAPKQVNTLEIQAHAISQIISAVLDGRPLINTWNDGWE YTWIFVWGFLGIVIARFTKSPLVNFLVVGITITSLLVISYLLLIWGWWVPVIPAILVLTINGMELIALYQYDQALRLGMK TRQDVIESTFETIHNGPLQSLAQVLKLIRCENTNTQELLPKIEKELEKLNHELRGIYEFLQQEYPSQDIKLYLGNNLVLS LQDPLHEVLYQVYSYTLDREFPCFKTIKVAIRSFEPIDEKSLSMEQKRGICRFLEEALCNVGKHATGVTKLQVTCSLIAG WYTLKIIDNGLGVNSSKKGRGTQQFINLARQLRGKFQRSPQIPQGTICELSWPVSQFWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.6.1.1
Molecular weight: Translated: 70181; Mature: 70181
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQPGLWSGIKAEIAIWRVGILPGLAVIGLVTFTRLFGSLESLEWMALDSFLRWRSEEPI CCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DARILLVEINQGDNYSLTSTISDSGFVGLLEKLQVYQPKVIGLNIDRNLLINSPEDDLVK CEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCEEECCCHHHHHH LFQKYRNLIATENILPAQIHSHLDLPPEQIAFADQILDSDGKARRSLLAINTSNGYKLSF HHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHCEEEEEEECCCCEEHHH AMRLARIYLAQENISLESSQLGKTKLPRFLPNSGGYIRADASGFQVLINFRSGTRRFRTL HHHHHHHHHHHCCCCCCHHHCCCHHCCCCCCCCCCEEEECCCCEEEEEEECCCCCHHHCC SGEDIKNGKFNPEWIRDRIVIIGITNTHSQDFIPTSAITSIKSAPKQVNTLEIQAHAISQ CCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHH IISAVLDGRPLINTWNDGWEYTWIFVWGFLGIVIARFTKSPLVNFLVVGITITSLLVISY HHHHHHCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH LLLIWGWWVPVIPAILVLTINGMELIALYQYDQALRLGMKTRQDVIESTFETIHNGPLQS HHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LAQVLKLIRCENTNTQELLPKIEKELEKLNHELRGIYEFLQQEYPSQDIKLYLGNNLVLS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEE LQDPLHEVLYQVYSYTLDREFPCFKTIKVAIRSFEPIDEKSLSMEQKRGICRFLEEALCN EHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHH VGKHATGVTKLQVTCSLIAGWYTLKIIDNGLGVNSSKKGRGTQQFINLARQLRGKFQRSP CCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC QIPQGTICELSWPVSQFWR CCCCCCEEEEECCHHHHCC >Mature Secondary Structure MMQPGLWSGIKAEIAIWRVGILPGLAVIGLVTFTRLFGSLESLEWMALDSFLRWRSEEPI CCCCCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DARILLVEINQGDNYSLTSTISDSGFVGLLEKLQVYQPKVIGLNIDRNLLINSPEDDLVK CEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCEEECCCHHHHHH LFQKYRNLIATENILPAQIHSHLDLPPEQIAFADQILDSDGKARRSLLAINTSNGYKLSF HHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHCEEEEEEECCCCEEHHH AMRLARIYLAQENISLESSQLGKTKLPRFLPNSGGYIRADASGFQVLINFRSGTRRFRTL HHHHHHHHHHHCCCCCCHHHCCCHHCCCCCCCCCCEEEECCCCEEEEEEECCCCCHHHCC SGEDIKNGKFNPEWIRDRIVIIGITNTHSQDFIPTSAITSIKSAPKQVNTLEIQAHAISQ CCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHH IISAVLDGRPLINTWNDGWEYTWIFVWGFLGIVIARFTKSPLVNFLVVGITITSLLVISY HHHHHHCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH LLLIWGWWVPVIPAILVLTINGMELIALYQYDQALRLGMKTRQDVIESTFETIHNGPLQS HHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LAQVLKLIRCENTNTQELLPKIEKELEKLNHELRGIYEFLQQEYPSQDIKLYLGNNLVLS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEE LQDPLHEVLYQVYSYTLDREFPCFKTIKVAIRSFEPIDEKSLSMEQKRGICRFLEEALCN EHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHH VGKHATGVTKLQVTCSLIAGWYTLKIIDNGLGVNSSKKGRGTQQFINLARQLRGKFQRSP CCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC QIPQGTICELSWPVSQFWR CCCCCCEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP
Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA