| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is murC
Identifier: 75908537
GI number: 75908537
Start: 2881914
End: 2883398
Strand: Direct
Name: murC
Synonym: Ava_2320
Alternate gene names: 75908537
Gene position: 2881914-2883398 (Clockwise)
Preceding gene: 75908534
Following gene: 75908538
Centisome position: 45.27
GC content: 42.76
Gene sequence:
>1485_bases ATGAATAATAGTGTAGATTTCGGCGGTAGACCATTTCATTTTATCGGAATCGGCGGTATAGGGATGTCTGCCCTGGCATA CGTTCTTGCAAAACGCCAGTTGCCAGTGTCAGGTTCTGACCTTCGTCCTAATCATATTACGCGCAAGTTGGAATCTATCG GCGCGCATATTTTTAGTAGACAAGAAGCGAGTAATCTTGAATTCTTTGGCTCTAAAGTTAGCTCTACTGAAATAGAATTA AATACACAAGAAATGTTTCCGCTTGGCAAGTCAACATTGCCTCAAGTGGTTTGTTCAACAGCAATTAACTCGAATAATTT AGAATACCAAGCAGCAATAGAATTAGGATGCCCAATTTTACATCGTTCAGATGTACTAGCGGCTTTAATTAACGATTATC ATAGTGTTGCCGTAGCAGGAACTCATGGCAAAACGACAACTAGTAGCATGATTGGTTATATGTTACTAGAAGCGGGTTTA GATCCAACAATCATTGTTGGTGGAGAAGTAAATGCTTGGGAAGGCAATGCCAGATTAGGACAAAGTCCTTATTTAGTAGC TGAGGCAGACGAATCAGATGGCTCCCTGGTCAAACACGCTCCAGAAATTGGTATTATCACTAATATTGAATTAGATCATC CTGACCATTACGACACCTTAGAAGAAGTCGTTGATATCTTTCAAACATTTGCCAAGGGTTGTAAAACCTTAATTGGTAGT GTTGATTGTGCAACAGTGCGCGAGTTGCTTCGCACCGCCGCCAGCGATCGCCAACAACCAACTATCACTTATAGTCTTCA TCAAGATACAGAAGCTGATTACACCGTTACTAATATTGACTGCCGTGCTGACGGTACCACTGCTTTAGTCTGGGAAAAAG GCAAAGCATTAGGTGTACTGAAACTAAAATTACTCAGTCGTCATAATCTAAGTAATGCTCTAGCCGCAGTAGCTGTTGGT CGTCTAGTGGGTCTAGAATTTGGGGAAATCGCCAAAGGTATCGCTGGTTTTGAAGGCGCAAGACGACGCTTTGAATTCCG TGGCGAAGTCGATGGTATTACCTTCATAGATGATTACGCCCATCACCCCAGCGAAATCCGGGCTACATTGGCTGCTGCGA GGCTTCAAGCTAGACCAGGACAAAGAGTAGTAGCTATCTTTCAACCCCACCGTTATAGTCGCACCTTGACCTTTTTAGAA GAATTCTCTGAGTCTTTCAGTCATGCCGATTTGGTAGTACTGACTGATATTTACAGTGCAGGGGAGCCCAATTTAGGACT AATTAGTGGTGAACAGTTGGCAGAAAAAATTGCTCAAGAACACCCACAGGTAGTTTATCAACCAACTTTATCTACAGTGT GTGAGTATTTATTAAAAAATCTCCGCCCTGGTGACTTGGCTTTATTCCTGGGTGCAGGAAATTTAAATCAGGCAATTCCC GAAATCATTACCACACTGTGCGAACCTGCGACAGCCACATTGTGA
Upstream 100 bases:
>100_bases AAAAAGATATAGGAGTAGTTACAGTAAAAATCCAAATCCTGTTATGATACGCGTGTTATTTGTGATTGATGGTGTGGTGT GGTGATAAGAGGAGTAATCA
Downstream 100 bases:
>100_bases GGACACTCACCAATGAAGGCTTTTATCTAAGCCAAGTGTTTACTTAGCAACAGTTTTATCGAAATTGCTGTAGTTGTACG GCAGATAAATGTAAAAATTT
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MNNSVDFGGRPFHFIGIGGIGMSALAYVLAKRQLPVSGSDLRPNHITRKLESIGAHIFSRQEASNLEFFGSKVSSTEIEL NTQEMFPLGKSTLPQVVCSTAINSNNLEYQAAIELGCPILHRSDVLAALINDYHSVAVAGTHGKTTTSSMIGYMLLEAGL DPTIIVGGEVNAWEGNARLGQSPYLVAEADESDGSLVKHAPEIGIITNIELDHPDHYDTLEEVVDIFQTFAKGCKTLIGS VDCATVRELLRTAASDRQQPTITYSLHQDTEADYTVTNIDCRADGTTALVWEKGKALGVLKLKLLSRHNLSNALAAVAVG RLVGLEFGEIAKGIAGFEGARRRFEFRGEVDGITFIDDYAHHPSEIRATLAAARLQARPGQRVVAIFQPHRYSRTLTFLE EFSESFSHADLVVLTDIYSAGEPNLGLISGEQLAEKIAQEHPQVVYQPTLSTVCEYLLKNLRPGDLALFLGAGNLNQAIP EIITTLCEPATATL
Sequences:
>Translated_494_residues MNNSVDFGGRPFHFIGIGGIGMSALAYVLAKRQLPVSGSDLRPNHITRKLESIGAHIFSRQEASNLEFFGSKVSSTEIEL NTQEMFPLGKSTLPQVVCSTAINSNNLEYQAAIELGCPILHRSDVLAALINDYHSVAVAGTHGKTTTSSMIGYMLLEAGL DPTIIVGGEVNAWEGNARLGQSPYLVAEADESDGSLVKHAPEIGIITNIELDHPDHYDTLEEVVDIFQTFAKGCKTLIGS VDCATVRELLRTAASDRQQPTITYSLHQDTEADYTVTNIDCRADGTTALVWEKGKALGVLKLKLLSRHNLSNALAAVAVG RLVGLEFGEIAKGIAGFEGARRRFEFRGEVDGITFIDDYAHHPSEIRATLAAARLQARPGQRVVAIFQPHRYSRTLTFLE EFSESFSHADLVVLTDIYSAGEPNLGLISGEQLAEKIAQEHPQVVYQPTLSTVCEYLLKNLRPGDLALFLGAGNLNQAIP EIITTLCEPATATL >Mature_494_residues MNNSVDFGGRPFHFIGIGGIGMSALAYVLAKRQLPVSGSDLRPNHITRKLESIGAHIFSRQEASNLEFFGSKVSSTEIEL NTQEMFPLGKSTLPQVVCSTAINSNNLEYQAAIELGCPILHRSDVLAALINDYHSVAVAGTHGKTTTSSMIGYMLLEAGL DPTIIVGGEVNAWEGNARLGQSPYLVAEADESDGSLVKHAPEIGIITNIELDHPDHYDTLEEVVDIFQTFAKGCKTLIGS VDCATVRELLRTAASDRQQPTITYSLHQDTEADYTVTNIDCRADGTTALVWEKGKALGVLKLKLLSRHNLSNALAAVAVG RLVGLEFGEIAKGIAGFEGARRRFEFRGEVDGITFIDDYAHHPSEIRATLAAARLQARPGQRVVAIFQPHRYSRTLTFLE EFSESFSHADLVVLTDIYSAGEPNLGLISGEQLAEKIAQEHPQVVYQPTLSTVCEYLLKNLRPGDLALFLGAGNLNQAIP EIITTLCEPATATL
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=500, Percent_Identity=35.2, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1790680, Length=497, Percent_Identity=26.9617706237425, Blast_Score=160, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_ANAVT (Q3MAP8)
Other databases:
- EMBL: CP000117 - RefSeq: YP_322833.1 - ProteinModelPortal: Q3MAP8 - SMR: Q3MAP8 - STRING: Q3MAP8 - GeneID: 3683590 - GenomeReviews: CP000117_GR - KEGG: ava:Ava_2320 - NMPDR: fig|240292.3.peg.199 - eggNOG: COG0773 - HOGENOM: HBG476594 - OMA: YQPHRYS - PhylomeDB: Q3MAP8 - ProtClustDB: PRK00421 - BioCyc: AVAR240292:AVA_2320-MONOMER - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 53541; Mature: 53541
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSVDFGGRPFHFIGIGGIGMSALAYVLAKRQLPVSGSDLRPNHITRKLESIGAHIFSR CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC QEASNLEFFGSKVSSTEIELNTQEMFPLGKSTLPQVVCSTAINSNNLEYQAAIELGCPIL CCCCCHHHHCCCCCCCEEEECHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCH HRSDVLAALINDYHSVAVAGTHGKTTTSSMIGYMLLEAGLDPTIIVGGEVNAWEGNARLG HHHHHHHHHHHCHHEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCEEECCCCCCCCC QSPYLVAEADESDGSLVKHAPEIGIITNIELDHPDHYDTLEEVVDIFQTFAKGCKTLIGS CCCEEEEECCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC VDCATVRELLRTAASDRQQPTITYSLHQDTEADYTVTNIDCRADGTTALVWEKGKALGVL CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCEEEHH KLKLLSRHNLSNALAAVAVGRLVGLEFGEIAKGIAGFEGARRRFEFRGEVDGITFIDDYA HHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHEEECCCCCCEEEEHHHC HHPSEIRATLAAARLQARPGQRVVAIFQPHRYSRTLTFLEEFSESFSHADLVVLTDIYSA CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHC GEPNLGLISGEQLAEKIAQEHPQVVYQPTLSTVCEYLLKNLRPGDLALFLGAGNLNQAIP CCCCCEEECHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH EIITTLCEPATATL HHHHHHCCCCCCCC >Mature Secondary Structure MNNSVDFGGRPFHFIGIGGIGMSALAYVLAKRQLPVSGSDLRPNHITRKLESIGAHIFSR CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC QEASNLEFFGSKVSSTEIELNTQEMFPLGKSTLPQVVCSTAINSNNLEYQAAIELGCPIL CCCCCHHHHCCCCCCCEEEECHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCH HRSDVLAALINDYHSVAVAGTHGKTTTSSMIGYMLLEAGLDPTIIVGGEVNAWEGNARLG HHHHHHHHHHHCHHEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCEEECCCCCCCCC QSPYLVAEADESDGSLVKHAPEIGIITNIELDHPDHYDTLEEVVDIFQTFAKGCKTLIGS CCCEEEEECCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC VDCATVRELLRTAASDRQQPTITYSLHQDTEADYTVTNIDCRADGTTALVWEKGKALGVL CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCEEEHH KLKLLSRHNLSNALAAVAVGRLVGLEFGEIAKGIAGFEGARRRFEFRGEVDGITFIDDYA HHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHEEECCCCCCEEEEHHHC HHPSEIRATLAAARLQARPGQRVVAIFQPHRYSRTLTFLEEFSESFSHADLVVLTDIYSA CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHC GEPNLGLISGEQLAEKIAQEHPQVVYQPTLSTVCEYLLKNLRPGDLALFLGAGNLNQAIP CCCCCEEECHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH EIITTLCEPATATL HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA