| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908507
Identifier: 75908507
GI number: 75908507
Start: 2847293
End: 2847781
Strand: Direct
Name: 75908507
Synonym: Ava_2290
Alternate gene names: NA
Gene position: 2847293-2847781 (Clockwise)
Preceding gene: 75908505
Following gene: 75908508
Centisome position: 44.73
GC content: 44.38
Gene sequence:
>489_bases ATGGAAGCAAATAGTGGTTACTTCGGTAAGCATTTACCACTAATTTCTGCGGGAATTTTTTTAGGTTTGGGATTAGGAGG CTTTGTAGATGGTATTCTCCTGCATCAAATCCTCCAGTGGCACCATATGTTAAGCAGCGTTCGACCCTTGACCACCGACT CTAACATAGATGTGAACATGGTATGGGATGGTTTATTTCATGCTTTAGATTGGGTGTTGACTGTAATTGGAGTGGTATTG TTGTGGAGGGCTGGAGGACGTGATGATGTGGTGTGGTCATCACGCACCTTTGGCGGTTCTTTGCTTGTGGGTGCTGGGTT ATTCAACCTGGTGGAAGGAATAATTAATCACCAAATTCTGGGTATTCATCACGTAAAACCAGGGGTACATCAGTTAGCTT GGGATTTAGGATTCTTGGTTTTGGGAGCGTTGCTTGTCTTGGTAGGTGGGATGATGCTACAAAGGGGCAACACTGAAATT AGTGAGTAG
Upstream 100 bases:
>100_bases GTGAGCGGCTTGGGATTGAAAGCTATTATTTGTCTGAAGATAGAGGATATTTTCAGACAAAAATCATATTTTGGTGAAAA TCCAGTCTAAGAGGTTGACA
Downstream 100 bases:
>100_bases TTCAGTAGTTACATTCCTCAACTTTTTGTCCAGCGACTTATGTCCATCGATACTTTTGAAAAAAGCAGCTTGAATTGGCA GGTTTCTCAGTTCCAACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MEANSGYFGKHLPLISAGIFLGLGLGGFVDGILLHQILQWHHMLSSVRPLTTDSNIDVNMVWDGLFHALDWVLTVIGVVL LWRAGGRDDVVWSSRTFGGSLLVGAGLFNLVEGIINHQILGIHHVKPGVHQLAWDLGFLVLGALLVLVGGMMLQRGNTEI SE
Sequences:
>Translated_162_residues MEANSGYFGKHLPLISAGIFLGLGLGGFVDGILLHQILQWHHMLSSVRPLTTDSNIDVNMVWDGLFHALDWVLTVIGVVL LWRAGGRDDVVWSSRTFGGSLLVGAGLFNLVEGIINHQILGIHHVKPGVHQLAWDLGFLVLGALLVLVGGMMLQRGNTEI SE >Mature_162_residues MEANSGYFGKHLPLISAGIFLGLGLGGFVDGILLHQILQWHHMLSSVRPLTTDSNIDVNMVWDGLFHALDWVLTVIGVVL LWRAGGRDDVVWSSRTFGGSLLVGAGLFNLVEGIINHQILGIHHVKPGVHQLAWDLGFLVLGALLVLVGGMMLQRGNTEI SE
Specific function: Unknown
COG id: COG4329
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17565; Mature: 17565
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEANSGYFGKHLPLISAGIFLGLGLGGFVDGILLHQILQWHHMLSSVRPLTTDSNIDVNM CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH VWDGLFHALDWVLTVIGVVLLWRAGGRDDVVWSSRTFGGSLLVGAGLFNLVEGIINHQIL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCHHE GIHHVKPGVHQLAWDLGFLVLGALLVLVGGMMLQRGNTEISE EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEANSGYFGKHLPLISAGIFLGLGLGGFVDGILLHQILQWHHMLSSVRPLTTDSNIDVNM CCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH VWDGLFHALDWVLTVIGVVLLWRAGGRDDVVWSSRTFGGSLLVGAGLFNLVEGIINHQIL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCHHE GIHHVKPGVHQLAWDLGFLVLGALLVLVGGMMLQRGNTEISE EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA