| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
Click here to switch to the map view.
The map label for this gene is 75908505
Identifier: 75908505
GI number: 75908505
Start: 2845631
End: 2846521
Strand: Direct
Name: 75908505
Synonym: Ava_2288
Alternate gene names: NA
Gene position: 2845631-2846521 (Clockwise)
Preceding gene: 75908504
Following gene: 75908507
Centisome position: 44.7
GC content: 41.3
Gene sequence:
>891_bases ATGCTTCAGTTTCAACCGCCTGGCTTTGGTCATAAAGTCGTCCACACATCTTTGGGCGCAATGGTTTACTATACCCAAAC TGCTGCACCTTGGTGGGATGATGACTCTGAAGATTTACCACCCCTATTGTTTCTTCATAATTTTGGCGGGGGAGCGTCTG CTTACGAATGGTCTAAAGTCTATCCGGCTTTTGCATCTACACACCGCATTCTTGCACCTGATTTGATTGGCTGGGGAGAA TCCGCACATCCAGTCAGGGATTATGAGATTAGAGACTATCTTACAGCGATCGCGGAATTTATCAGCCAAACTTGTCAGCA ACCAGTCAAGGTAGTCGCGTCTTCCTTAACGGCTGCTTTCACTATCCGTTTAGCAATTACTCAGCCCGACCTGTTTGACT CACTCTATTTGGTCTGTCCTTCTGGATTTGATGATTTTGGTCAAGGTGCTGGTCGTAGATTACCACTACCGATAATTAAT GCACCTTTATTAGATAATCTTATTTATGCCTTGGGCGCAGAAAATGAAATTGCTGTGAGGAATTTTCTGCAAAGTTTTTT ATTCGCTCAACCACAACGGGTTTCGCAGGAAATGGTAGACGCTTATTTATATTCTGCACAACAACCCAATGCCAAGTTTG CTGCATTATCTTTTTTAAAAGGCGACCTTTACTTTGACTTGAGTTTATACATTCAACAATTGATAACTCCCACAGTTATC TTTTGGGGAGAAAAGGCACAATTCACCAGGATTGAATTAGGACAACGCTTGGCTAATTTAAATCCTCATATAATTAGAAA ATTTTATGCGATCGCCGACACAGGAATATTACCCCATTTAGAACAACCAGAAATAATTATCGGCTTATTGCAACCATATG TAAAAGTATGA
Upstream 100 bases:
>100_bases GTTTTGTCATTGGCTTTGGTGCAGCTTATCACATTAGTGGCGATCGCTTAGATACACTCGTCCCCATTACAGGCGATAAA GGATAGGGAAATTAAACATT
Downstream 100 bases:
>100_bases GATTTCAAATAGCAATTGCTATGAGTCCACCCAATTAATTTTGACAGGTTGCGGGTGTTCAGATACCCAACTTTTTTAAA AAAGTCGGGTATCTATGACT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold-Containing Protein; Alpha/Beta Hydrolase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; 2-Hydroxy-6-Oxohepta-2 4-Dienoate Hydrolase; Homolog Hydrolase; Dihydrolipoamide Acetyltransferase; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Fold Domain-Containing Protein; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MLQFQPPGFGHKVVHTSLGAMVYYTQTAAPWWDDDSEDLPPLLFLHNFGGGASAYEWSKVYPAFASTHRILAPDLIGWGE SAHPVRDYEIRDYLTAIAEFISQTCQQPVKVVASSLTAAFTIRLAITQPDLFDSLYLVCPSGFDDFGQGAGRRLPLPIIN APLLDNLIYALGAENEIAVRNFLQSFLFAQPQRVSQEMVDAYLYSAQQPNAKFAALSFLKGDLYFDLSLYIQQLITPTVI FWGEKAQFTRIELGQRLANLNPHIIRKFYAIADTGILPHLEQPEIIIGLLQPYVKV
Sequences:
>Translated_296_residues MLQFQPPGFGHKVVHTSLGAMVYYTQTAAPWWDDDSEDLPPLLFLHNFGGGASAYEWSKVYPAFASTHRILAPDLIGWGE SAHPVRDYEIRDYLTAIAEFISQTCQQPVKVVASSLTAAFTIRLAITQPDLFDSLYLVCPSGFDDFGQGAGRRLPLPIIN APLLDNLIYALGAENEIAVRNFLQSFLFAQPQRVSQEMVDAYLYSAQQPNAKFAALSFLKGDLYFDLSLYIQQLITPTVI FWGEKAQFTRIELGQRLANLNPHIIRKFYAIADTGILPHLEQPEIIIGLLQPYVKV >Mature_296_residues MLQFQPPGFGHKVVHTSLGAMVYYTQTAAPWWDDDSEDLPPLLFLHNFGGGASAYEWSKVYPAFASTHRILAPDLIGWGE SAHPVRDYEIRDYLTAIAEFISQTCQQPVKVVASSLTAAFTIRLAITQPDLFDSLYLVCPSGFDDFGQGAGRRLPLPIIN APLLDNLIYALGAENEIAVRNFLQSFLFAQPQRVSQEMVDAYLYSAQQPNAKFAALSFLKGDLYFDLSLYIQQLITPTVI FWGEKAQFTRIELGQRLANLNPHIIRKFYAIADTGILPHLEQPEIIIGLLQPYVKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33156; Mature: 33156
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQFQPPGFGHKVVHTSLGAMVYYTQTAAPWWDDDSEDLPPLLFLHNFGGGASAYEWSKV CCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH YPAFASTHRILAPDLIGWGESAHPVRDYEIRDYLTAIAEFISQTCQQPVKVVASSLTAAF HHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE TIRLAITQPDLFDSLYLVCPSGFDDFGQGAGRRLPLPIINAPLLDNLIYALGAENEIAVR EEEEEEECCCHHCCEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH NFLQSFLFAQPQRVSQEMVDAYLYSAQQPNAKFAALSFLKGDLYFDLSLYIQQLITPTVI HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCEEE FWGEKAQFTRIELGQRLANLNPHIIRKFYAIADTGILPHLEQPEIIIGLLQPYVKV EECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLQFQPPGFGHKVVHTSLGAMVYYTQTAAPWWDDDSEDLPPLLFLHNFGGGASAYEWSKV CCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH YPAFASTHRILAPDLIGWGESAHPVRDYEIRDYLTAIAEFISQTCQQPVKVVASSLTAAF HHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE TIRLAITQPDLFDSLYLVCPSGFDDFGQGAGRRLPLPIINAPLLDNLIYALGAENEIAVR EEEEEEECCCHHCCEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH NFLQSFLFAQPQRVSQEMVDAYLYSAQQPNAKFAALSFLKGDLYFDLSLYIQQLITPTVI HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCEEE FWGEKAQFTRIELGQRLANLNPHIIRKFYAIADTGILPHLEQPEIIIGLLQPYVKV EECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA