| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is kojP [H]
Identifier: 75908496
GI number: 75908496
Start: 2834085
End: 2836364
Strand: Direct
Name: kojP [H]
Synonym: Ava_2279
Alternate gene names: 75908496
Gene position: 2834085-2836364 (Clockwise)
Preceding gene: 75908494
Following gene: 75908497
Centisome position: 44.52
GC content: 44.52
Gene sequence:
>2280_bases ATGCTTGACGACGTAGATATATCTGTGGAAAATTCCCTTGAGCCACTGCTAGATGCTAACGAATGGAATGTGATTGAGAC AGAGTTTAACCCTACACAACTACACCACAAAGAAACTGTCTTCACTCTCAGTAATGGTTATCTAGGAACCAGGGGAAGTT TTGAGGAAAGTTATCCAGAGGATTTTGCCGCCTCAATGATTCATGGCATTTATGATGATACGCAAATTTCCCATACAGAA TTAGTAAATTGTCCTAACTGGTTGCCATTGGTAGTGGAGGTGGCGGGTGAACAATTTGGCATGAATTCGGGGGAAATTCT CCATTATGAGCGTCGGTTGGACTTGCGATTGGGTTTAGTTAGTCGTGATGTGCGTTGGCGTTCTCCCCAAGGTCATACTG TAGATTTGCATTTTGAACGTTTTGCTAGTTTGGCAGATCAACACGTATTAGCGATTCGTTGTCAAATCACATCTGTAGAT TTTACAGGTGAGATTACAGTCACAGCCACATTTGATGGGGAACCAAAAACCCAAGGGACTCCCCATTGGCAAACTTTAAA CCAAGGTGGCGTAGACCAGATTCTTTGGTTACAAAGTCAAACCCTGCATTCTGGCCTTGGTTTGGGAATGAGTGCCAAGT TAATCATAGATGGTGACGAGACTGCGGCTGTTTCTGTCAAAAATGCTGATTTTCCAACTTTGGGGACTACTTTTGAATGT AACCCAGGAAAAACAGTCATTGTGGAAAAGATTGTGACCGTGTTTACTTCCAGAGAAACAGACATCCCCATTGCAGCCGC ACTAGAAAGATTAGCTGATGAACCCAGATACACTACCCTATTAGCTGCCCATATTGCTGCTTGGGAGCAAGTTTGGCAAA ATAGCGACATTATTATTGAAGGCGATCGCCAAGCCCAACTCAGTGTCCGTTACAATCTTTTTCAATTACTATCCGTAGCA CCAAGCCACGACGACCATGTAAGTATAGCCCCTAAAACCCTCTCCGGCTTTGCCTATAGCGGACACATCTTTTGGGACAC CGAAATATTTATCCTCCCCTTCCTCACATTTACCCAACCAGCCTTAGCGCGAAACTTACTCACCTACCGCTACCACACCT TACCAGGCGCAAGACGCAAAGCCCAAGAAGCCGGTTATCAAGGCGCAATGTTTGCTTGGGAAAGTGCTACAACCGGTGAT GAAGTCACCCCCCGGTGGGTTCCTGGTGCTAATGGTGAGTTAGTAAGAATTTGGTGCGGTGATATCGAAGTACATATCAC AGCTGACGTAGCTTATGCAGTTTGGCACTACTGGCAAACTACCGACGATGATGAGTGGATGCACGACTATGGTGCAGAAA TAATTCTTGATACAGCCGTGTTTTGGGAAAGTCGCGTCCAGTGGAATCAACAACGCCACAGTTACGACATTCTCGATGTG ATTGGCCCCGATGAAAATCATGATCGCGTTGATAATAACGCCTTTACCAACTTGATGGTACAGTGGCACTTACAATCAGC TTTAGCCCTGTGGGATTGGTTCAAACACGTTTATCCCGAAAAAGCTGCACAACTAGTAAAACAACTTAACTTAACTACAG AACGTCTACACCGTTGGGCAGAAATTCAAGAACGTATCTTTGTCAATCAAGATATAACCACAGGTTTAATCGAACAGTTT GAGGGCTTTTTTCAACTAGAAGATGTCAACCTAGCTGATTACGAACCCCGCACAAAATCTTTGCAAGGTTTGTTAGGGAT TGAAGCCACTAGCCAAAAGCAAATACTCAAACAGCCTGATGTGTTGATGCTACTTTACTTGCTACGTCAAGCTTACGACT ATAACACCCTCAAAGTTAACTGGGACTATTACACCCAACGCACCGACCATACTTATGGTTCTTCACTAGGCCCAGCAATT CATGCTGTCTTAGCTTGCGACCTTAATAACCCTACAGAAGCCTACACTCATTTTTTAAGAGCTGCATTAGTAGATTTGGA AGATGTCAGACTCAATGCCGCCGAAGGAATCCACGCCGCCAGTGCAGGAGGAGTTTGGCAAGCTGTTGTTTTAGGGTTCG GGGGTGTGAGAATGACTCAATTTGGCCCGATGGCTTGTCCTAATCTCCCGTCAACATGGAAACGCTTGAAATTTAGGCTG CAATGGCGTAATGAATGGTATGAGTTTGATTTACAACCAGAAACAGCAATGTCAGTAGTGACACAAGAAGCTTCAGTTCC TGTTTTTGCCACTGTACAAGCTGTAATGGTTAATGGGTAA
Upstream 100 bases:
>100_bases ACGTATCAACAATAAAAGCCAGGATTTAATTATCTATGAATCCTACCGATTATGTTTCATCCTGACAACAGCCATCTGCA AATTTTAGGTTTTCTAACTC
Downstream 100 bases:
>100_bases TGGGTAATGGGTAATGGGTAATTGGTTTGTCGCAATTACCCATTAGGATGTGGGATTGACCTTTTTTGAATTTTTAATTT TGAACTGGAACGTAAAGCCT
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MLDDVDISVENSLEPLLDANEWNVIETEFNPTQLHHKETVFTLSNGYLGTRGSFEESYPEDFAASMIHGIYDDTQISHTE LVNCPNWLPLVVEVAGEQFGMNSGEILHYERRLDLRLGLVSRDVRWRSPQGHTVDLHFERFASLADQHVLAIRCQITSVD FTGEITVTATFDGEPKTQGTPHWQTLNQGGVDQILWLQSQTLHSGLGLGMSAKLIIDGDETAAVSVKNADFPTLGTTFEC NPGKTVIVEKIVTVFTSRETDIPIAAALERLADEPRYTTLLAAHIAAWEQVWQNSDIIIEGDRQAQLSVRYNLFQLLSVA PSHDDHVSIAPKTLSGFAYSGHIFWDTEIFILPFLTFTQPALARNLLTYRYHTLPGARRKAQEAGYQGAMFAWESATTGD EVTPRWVPGANGELVRIWCGDIEVHITADVAYAVWHYWQTTDDDEWMHDYGAEIILDTAVFWESRVQWNQQRHSYDILDV IGPDENHDRVDNNAFTNLMVQWHLQSALALWDWFKHVYPEKAAQLVKQLNLTTERLHRWAEIQERIFVNQDITTGLIEQF EGFFQLEDVNLADYEPRTKSLQGLLGIEATSQKQILKQPDVLMLLYLLRQAYDYNTLKVNWDYYTQRTDHTYGSSLGPAI HAVLACDLNNPTEAYTHFLRAALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRMTQFGPMACPNLPSTWKRLKFRL QWRNEWYEFDLQPETAMSVVTQEASVPVFATVQAVMVNG
Sequences:
>Translated_759_residues MLDDVDISVENSLEPLLDANEWNVIETEFNPTQLHHKETVFTLSNGYLGTRGSFEESYPEDFAASMIHGIYDDTQISHTE LVNCPNWLPLVVEVAGEQFGMNSGEILHYERRLDLRLGLVSRDVRWRSPQGHTVDLHFERFASLADQHVLAIRCQITSVD FTGEITVTATFDGEPKTQGTPHWQTLNQGGVDQILWLQSQTLHSGLGLGMSAKLIIDGDETAAVSVKNADFPTLGTTFEC NPGKTVIVEKIVTVFTSRETDIPIAAALERLADEPRYTTLLAAHIAAWEQVWQNSDIIIEGDRQAQLSVRYNLFQLLSVA PSHDDHVSIAPKTLSGFAYSGHIFWDTEIFILPFLTFTQPALARNLLTYRYHTLPGARRKAQEAGYQGAMFAWESATTGD EVTPRWVPGANGELVRIWCGDIEVHITADVAYAVWHYWQTTDDDEWMHDYGAEIILDTAVFWESRVQWNQQRHSYDILDV IGPDENHDRVDNNAFTNLMVQWHLQSALALWDWFKHVYPEKAAQLVKQLNLTTERLHRWAEIQERIFVNQDITTGLIEQF EGFFQLEDVNLADYEPRTKSLQGLLGIEATSQKQILKQPDVLMLLYLLRQAYDYNTLKVNWDYYTQRTDHTYGSSLGPAI HAVLACDLNNPTEAYTHFLRAALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRMTQFGPMACPNLPSTWKRLKFRL QWRNEWYEFDLQPETAMSVVTQEASVPVFATVQAVMVNG >Mature_759_residues MLDDVDISVENSLEPLLDANEWNVIETEFNPTQLHHKETVFTLSNGYLGTRGSFEESYPEDFAASMIHGIYDDTQISHTE LVNCPNWLPLVVEVAGEQFGMNSGEILHYERRLDLRLGLVSRDVRWRSPQGHTVDLHFERFASLADQHVLAIRCQITSVD FTGEITVTATFDGEPKTQGTPHWQTLNQGGVDQILWLQSQTLHSGLGLGMSAKLIIDGDETAAVSVKNADFPTLGTTFEC NPGKTVIVEKIVTVFTSRETDIPIAAALERLADEPRYTTLLAAHIAAWEQVWQNSDIIIEGDRQAQLSVRYNLFQLLSVA PSHDDHVSIAPKTLSGFAYSGHIFWDTEIFILPFLTFTQPALARNLLTYRYHTLPGARRKAQEAGYQGAMFAWESATTGD EVTPRWVPGANGELVRIWCGDIEVHITADVAYAVWHYWQTTDDDEWMHDYGAEIILDTAVFWESRVQWNQQRHSYDILDV IGPDENHDRVDNNAFTNLMVQWHLQSALALWDWFKHVYPEKAAQLVKQLNLTTERLHRWAEIQERIFVNQDITTGLIEQF EGFFQLEDVNLADYEPRTKSLQGLLGIEATSQKQILKQPDVLMLLYLLRQAYDYNTLKVNWDYYTQRTDHTYGSSLGPAI HAVLACDLNNPTEAYTHFLRAALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRMTQFGPMACPNLPSTWKRLKFRL QWRNEWYEFDLQPETAMSVVTQEASVPVFATVQAVMVNG
Specific function: Hydrolyzes kojibiose in the presence of an inorganic phosphoric acid to form D-glucose and beta-D-glucose-1-phosphoric acid. Can act with alpha-1,2-oligoglucans, such as selaginose, as substrate, but more slowly. Inactive when dissaccharides with linkages
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=443, Percent_Identity=30.0225733634311, Blast_Score=158, Evalue=2e-38, Organism=Escherichia coli, GI1787575, Length=713, Percent_Identity=30.9957924263675, Blast_Score=330, Evalue=2e-91, Organism=Saccharomyces cerevisiae, GI6325283, Length=551, Percent_Identity=22.6860254083485, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24583760, Length=309, Percent_Identity=29.7734627831715, Blast_Score=129, Evalue=6e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: =2.4.1.230 [H]
Molecular weight: Translated: 86004; Mature: 86004
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDVDISVENSLEPLLDANEWNVIETEFNPTQLHHKETVFTLSNGYLGTRGSFEESYPE CCCCCEEECCCCCCHHCCCCCCCEEEECCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCH DFAASMIHGIYDDTQISHTELVNCPNWLPLVVEVAGEQFGMNSGEILHYERRLDLRLGLV HHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHEEEHHHHHCCCCCCEEEEEEECCEEEEEE SRDVRWRSPQGHTVDLHFERFASLADQHVLAIRCQITSVDFTGEITVTATFDGEPKTQGT ECCCEECCCCCCEEEEEHHHHHHHHCCEEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCC PHWQTLNQGGVDQILWLQSQTLHSGLGLGMSAKLIIDGDETAAVSVKNADFPTLGTTFEC CCHHCCCCCCCCCEEEEHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEC NPGKTVIVEKIVTVFTSRETDIPIAAALERLADEPRYTTLLAAHIAAWEQVWQNSDIIIE CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEE GDRQAQLSVRYNLFQLLSVAPSHDDHVSIAPKTLSGFAYSGHIFWDTEIFILPFLTFTQP CCCCEEEEEHHHHHHHHHCCCCCCCCEEECCCHHCCEEEECEEEECCCEEEEEHHHHCCH ALARNLLTYRYHTLPGARRKAQEAGYQGAMFAWESATTGDEVTPRWVPGANGELVRIWCG HHHHHHHHHHEECCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEC DIEVHITADVAYAVWHYWQTTDDDEWMHDYGAEIILDTAVFWESRVQWNQQRHSYDILDV CEEEEEEEHHHEEHHHHHCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEE IGPDENHDRVDNNAFTNLMVQWHLQSALALWDWFKHVYPEKAAQLVKQLNLTTERLHRWA CCCCCCCCCCCCCHHHHHEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH EIQERIFVNQDITTGLIEQFEGFFQLEDVNLADYEPRTKSLQGLLGIEATSQKQILKQPD HHHHHEECCCCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCC VLMLLYLLRQAYDYNTLKVNWDYYTQRTDHTYGSSLGPAIHAVLACDLNNPTEAYTHFLR HHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHH AALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRMTQFGPMACPNLPSTWKRLKFRL HHHHCHHHHEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHEEEE QWRNEWYEFDLQPETAMSVVTQEASVPVFATVQAVMVNG EECCCEEEEECCCHHHHHHHHHCCCCCEEEEEEEEEECC >Mature Secondary Structure MLDDVDISVENSLEPLLDANEWNVIETEFNPTQLHHKETVFTLSNGYLGTRGSFEESYPE CCCCCEEECCCCCCHHCCCCCCCEEEECCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCH DFAASMIHGIYDDTQISHTELVNCPNWLPLVVEVAGEQFGMNSGEILHYERRLDLRLGLV HHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHEEEHHHHHCCCCCCEEEEEEECCEEEEEE SRDVRWRSPQGHTVDLHFERFASLADQHVLAIRCQITSVDFTGEITVTATFDGEPKTQGT ECCCEECCCCCCEEEEEHHHHHHHHCCEEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCC PHWQTLNQGGVDQILWLQSQTLHSGLGLGMSAKLIIDGDETAAVSVKNADFPTLGTTFEC CCHHCCCCCCCCCEEEEHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEC NPGKTVIVEKIVTVFTSRETDIPIAAALERLADEPRYTTLLAAHIAAWEQVWQNSDIIIE CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEE GDRQAQLSVRYNLFQLLSVAPSHDDHVSIAPKTLSGFAYSGHIFWDTEIFILPFLTFTQP CCCCEEEEEHHHHHHHHHCCCCCCCCEEECCCHHCCEEEECEEEECCCEEEEEHHHHCCH ALARNLLTYRYHTLPGARRKAQEAGYQGAMFAWESATTGDEVTPRWVPGANGELVRIWCG HHHHHHHHHHEECCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEC DIEVHITADVAYAVWHYWQTTDDDEWMHDYGAEIILDTAVFWESRVQWNQQRHSYDILDV CEEEEEEEHHHEEHHHHHCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEE IGPDENHDRVDNNAFTNLMVQWHLQSALALWDWFKHVYPEKAAQLVKQLNLTTERLHRWA CCCCCCCCCCCCCHHHHHEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH EIQERIFVNQDITTGLIEQFEGFFQLEDVNLADYEPRTKSLQGLLGIEATSQKQILKQPD HHHHHEECCCCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCC VLMLLYLLRQAYDYNTLKVNWDYYTQRTDHTYGSSLGPAIHAVLACDLNNPTEAYTHFLR HHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHH AALVDLEDVRLNAAEGIHAASAGGVWQAVVLGFGGVRMTQFGPMACPNLPSTWKRLKFRL HHHHCHHHHEEECCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHEEEE QWRNEWYEFDLQPETAMSVVTQEASVPVFATVQAVMVNG EECCCEEEEECCCHHHHHHHHHCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA