| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908306
Identifier: 75908306
GI number: 75908306
Start: 2576722
End: 2577210
Strand: Direct
Name: 75908306
Synonym: Ava_2085
Alternate gene names: NA
Gene position: 2576722-2577210 (Clockwise)
Preceding gene: 75908304
Following gene: 75908308
Centisome position: 40.48
GC content: 44.38
Gene sequence:
>489_bases ATGCCACCCAGAATAACAAACCAAGATACCTGGCACCAGGCCGAACTCCTCATGCAGCCTGCTTTTATTCGCGTTGTCGA TAATCTCCGCAAGCAGCTAGATGAATCTGCTTGGAAAGGAACTTACCAAGATGTATTAATTTGGCCCCCCAACACCACAG ATGAAACTAAAACTTTGGTGACGCAGTTATTGCAGGAAATGGAATCTGCAACCTTAGAACAGGCTGATGCCATCAGGGAA ACTTTGGCTAAACTGCCAATGCCCCACCCAGGATATCATTTATGTTTGCAACGTCAAGACCAAAGTGCCAGTATCGATTT GTGGGAACTGTGTTATCAGGTGTGTTTCCGTAATTACACTTCTGGGAGTGAGTTGGTTGATATTGATACTAGTTTAATTG ATGAAACAGGTGAGGTCGATTGGCAGCGTTTGGAAGTGAAGACTAAGGAATTAGTTGAGCAAGTGTTTGCGACTTTACCA GAAGGGTAG
Upstream 100 bases:
>100_bases CATGAAATCCGCTATCTTGATAAAAGATTTGGACTATATAAGCAATCTTTTTAATAAACAAGACTGTAAATTTTTCTTTT AGTGCCTTTGTTAATTACCA
Downstream 100 bases:
>100_bases GGATGTTGCGATCGCCTAGCGTAGCCCAATAAGTCATAGAACTTGTTGGTTTATTTTCTCTTGTGCAGACTTTGGTGGGC GATCGCTAATTTAATACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPPRITNQDTWHQAELLMQPAFIRVVDNLRKQLDESAWKGTYQDVLIWPPNTTDETKTLVTQLLQEMESATLEQADAIRE TLAKLPMPHPGYHLCLQRQDQSASIDLWELCYQVCFRNYTSGSELVDIDTSLIDETGEVDWQRLEVKTKELVEQVFATLP EG
Sequences:
>Translated_162_residues MPPRITNQDTWHQAELLMQPAFIRVVDNLRKQLDESAWKGTYQDVLIWPPNTTDETKTLVTQLLQEMESATLEQADAIRE TLAKLPMPHPGYHLCLQRQDQSASIDLWELCYQVCFRNYTSGSELVDIDTSLIDETGEVDWQRLEVKTKELVEQVFATLP EG >Mature_161_residues PPRITNQDTWHQAELLMQPAFIRVVDNLRKQLDESAWKGTYQDVLIWPPNTTDETKTLVTQLLQEMESATLEQADAIRET LAKLPMPHPGYHLCLQRQDQSASIDLWELCYQVCFRNYTSGSELVDIDTSLIDETGEVDWQRLEVKTKELVEQVFATLPE G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18691; Mature: 18560
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPRITNQDTWHQAELLMQPAFIRVVDNLRKQLDESAWKGTYQDVLIWPPNTTDETKTLV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH TQLLQEMESATLEQADAIRETLAKLPMPHPGYHLCLQRQDQSASIDLWELCYQVCFRNYT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCHHHHHHHHHHHCCC SGSELVDIDTSLIDETGEVDWQRLEVKTKELVEQVFATLPEG CCCCEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PPRITNQDTWHQAELLMQPAFIRVVDNLRKQLDESAWKGTYQDVLIWPPNTTDETKTLV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH TQLLQEMESATLEQADAIRETLAKLPMPHPGYHLCLQRQDQSASIDLWELCYQVCFRNYT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCHHHHHHHHHHHCCC SGSELVDIDTSLIDETGEVDWQRLEVKTKELVEQVFATLPEG CCCCEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA